RNA–Protein interactions for RNA: ENSMUST00000110647.7

Trp53bp1-201, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trp53bp1, Length 9,405 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53bp1-201ENSMUST00000110647 Lama1P19137 3084 aa3.64□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Szt2A2A9C3 3431 aa3.63□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Dmxl2Q8BPN8 3032 aa3.63□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Lrrc37aB1AWG4 3215 aa3.62□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Celsr3Q91ZI0 3301 aa3.62□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Krtap14O08640 167 aa3.61□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 4933415A04RikQ9D443 101 aa3.6□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Krtap13O88375 197 aa3.6□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 LrbaQ9ESE1 2856 aa3.6□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Lelp1Q9DAE3 120 aa3.59□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Celsr2Q9R0M0 2920 aa3.59□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Gm36176A0A1W2P8D5 158 aa3.59□□□□□ -1.83
Trp53bp1-201ENSMUST00000110647 Myo15aQ9QZZ4 3511 aa3.57□□□□□ -1.84
Trp53bp1-201ENSMUST00000110647 Adgrg4B7ZCC9 3073 aa3.57□□□□□ -1.84
Trp53bp1-201ENSMUST00000110647 A930033H14RikG5E8X6 103 aa3.57□□□□□ -1.84
Trp53bp1-201ENSMUST00000110647 Zfhx3Q61329 3726 aa3.56□□□□□ -1.84
Trp53bp1-201ENSMUST00000110647 2310061N02RikQ9D6S9 174 aa3.55□□□□□ -1.84
Trp53bp1-201ENSMUST00000110647 Gm9112A2AI92 75 aa3.54□□□□□ -1.84
Trp53bp1-201ENSMUST00000110647 Frem2Q6NVD0 3160 aa3.53□□□□□ -1.84
Trp53bp1-201ENSMUST00000110647 Gm9508A0A1W2P7W0 230 aa3.53□□□□□ -1.84
Trp53bp1-201ENSMUST00000110647 DmdP11531 3678 aa3.5□□□□□ -1.85
Trp53bp1-201ENSMUST00000110647 Vps13cQ8BX70 3748 aa3.49□□□□□ -1.85
Trp53bp1-201ENSMUST00000110647 Akap9Q70FJ1 3797 aa3.49□□□□□ -1.85
Trp53bp1-201ENSMUST00000110647 VwfQ8CIZ8 2813 aa3.48□□□□□ -1.85
Trp53bp1-201ENSMUST00000110647 Col6a3E9PWQ3 3284 aa3.48□□□□□ -1.85
Trp53bp1-201ENSMUST00000110647 Dchs2A0A0A6YW72 3346 aa3.47□□□□□ -1.85
Trp53bp1-201ENSMUST00000110647 Brca2P97929 3329 aa3.47□□□□□ -1.85
Trp53bp1-201ENSMUST00000110647 Gm17402F6Z0L5 76 aa3.46□□□□□ -1.85
Trp53bp1-201ENSMUST00000110647 Gm17416Q30KP4 66 aa3.46□□□□□ -1.86
Trp53bp1-201ENSMUST00000110647 Gm9507D3Z5T3 223 aa3.43□□□□□ -1.86
Trp53bp1-201ENSMUST00000110647 B930094E09RikQ8C4T2 136 aa3.43□□□□□ -1.86
Trp53bp1-201ENSMUST00000110647 4933428G20RikQ9D3X4 101 aa3.42□□□□□ -1.86
Trp53bp1-201ENSMUST00000110647 OtogO55225 2910 aa3.41□□□□□ -1.86
Trp53bp1-201ENSMUST00000110647 SpegQ62407 3262 aa3.39□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 Dchs1E9PVD3 3291 aa3.39□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 Gm5965D3Z724 196 aa3.38□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 Tenm2Q9WTS5 2764 aa3.38□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 Prm2P07978 107 aa3.38□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 VcanQ62059 3357 aa3.36□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 Krtap10-4Q08EG8 221 aa3.35□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 Gm20537G3UYK7 97 aa3.35□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 Ank2Q8C8R3 3898 aa3.34□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 Helz2E9QAM5 2947 aaKnown RBP3.34□□□□□ -1.87
Trp53bp1-201ENSMUST00000110647 2310057N15RikQ9D6T8 200 aa3.34□□□□□ -1.88
Trp53bp1-201ENSMUST00000110647 Col7a1Q63870 2944 aa3.33□□□□□ -1.88
Trp53bp1-201ENSMUST00000110647 2210017I01RikA0A0A6YVV1 95 aa3.32□□□□□ -1.88
Trp53bp1-201ENSMUST00000110647 Krtap10-10A0A1W2P7T6 217 aa3.31□□□□□ -1.88
Trp53bp1-201ENSMUST00000110647 Smg1Q8BKX6 3658 aaKnown RBP3.3□□□□□ -1.88
Trp53bp1-201ENSMUST00000110647 SmcpP15265 143 aa3.26□□□□□ -1.89
Trp53bp1-201ENSMUST00000110647 Gm2696A0A1W2P709 240 aa3.26□□□□□ -1.89
Trp53bp1-201ENSMUST00000110647 Wdfy3Q6VNB8 3508 aa3.25□□□□□ -1.89
Trp53bp1-201ENSMUST00000110647 RelnQ60841 3461 aa3.24□□□□□ -1.89
Trp53bp1-201ENSMUST00000110647 Lama5Q61001 3718 aa3.24□□□□□ -1.89
Trp53bp1-201ENSMUST00000110647 Cmya5Q70KF4 3739 aa3.24□□□□□ -1.89
Trp53bp1-201ENSMUST00000110647 SpenQ62504 3644 aaKnown RBP3.23□□□□□ -1.89
Trp53bp1-201ENSMUST00000110647 Muc5acE9QAQ8 3455 aa3.23□□□□□ -1.89
Trp53bp1-201ENSMUST00000110647 Zfhx4Q9JJN2 3550 aa3.21□□□□□ -1.9
Trp53bp1-201ENSMUST00000110647 2310079G19RikQ9D6L6 185 aa3.2□□□□□ -1.9
Trp53bp1-201ENSMUST00000110647 Gm19668J3QMD1 248 aa3.2□□□□□ -1.9
Trp53bp1-201ENSMUST00000110647 Fbn1Q61554 2873 aaKnown RBP3.16□□□□□ -1.9
Trp53bp1-201ENSMUST00000110647 Csmd2V9GX34 3611 aa3.16□□□□□ -1.9
Trp53bp1-201ENSMUST00000110647 Csmd1Q923L3 3564 aa3.12□□□□□ -1.91
Trp53bp1-201ENSMUST00000110647 Muc6Q80T03 2850 aa3.11□□□□□ -1.91
Trp53bp1-201ENSMUST00000110647 Gm884A2A9H6 3643 aa3.07□□□□□ -1.92
Trp53bp1-201ENSMUST00000110647 Muc4Q8JZM8 3443 aa3.05□□□□□ -1.92
Trp53bp1-201ENSMUST00000110647 Gm9918Q8BUR5 174 aa3.04□□□□□ -1.92
Trp53bp1-201ENSMUST00000110647 BsnO88737 3942 aa3.02□□□□□ -1.93
Trp53bp1-201ENSMUST00000110647 Krtap13-1Q8K198 168 aa2.95□□□□□ -1.94
Trp53bp1-201ENSMUST00000110647 Gm9736A0A1W2P7N1 277 aa2.94□□□□□ -1.94
Trp53bp1-201ENSMUST00000110647 LystP97412 3788 aa2.93□□□□□ -1.94
Trp53bp1-201ENSMUST00000110647 Krtap8-1O08633 61 aa2.91□□□□□ -1.94
Trp53bp1-201ENSMUST00000110647 Xirp2Q4U4S6 3784 aa2.91□□□□□ -1.94
Trp53bp1-201ENSMUST00000110647 Sprr2kO70562 68 aa2.9□□□□□ -1.94
Trp53bp1-201ENSMUST00000110647 Sprr2gO70558 76 aa2.89□□□□□ -1.95
Trp53bp1-201ENSMUST00000110647 Svep1A2AVA0 3567 aa2.88□□□□□ -1.95
Trp53bp1-201ENSMUST00000110647 Gm11939A2A592 99 aa2.88□□□□□ -1.95
Trp53bp1-201ENSMUST00000110647 Krtap19-5O08632 62 aa2.87□□□□□ -1.95
Trp53bp1-201ENSMUST00000110647 Gm6358A0A087WPH4 74 aa2.86□□□□□ -1.95
Trp53bp1-201ENSMUST00000110647 Csmd3Q80T79 3707 aa2.85□□□□□ -1.95
Trp53bp1-201ENSMUST00000110647 Krtap19-9aF8WH65 55 aa2.83□□□□□ -1.96
Trp53bp1-201ENSMUST00000110647 Krtap3-1A2A591 98 aa2.82□□□□□ -1.96
Trp53bp1-201ENSMUST00000110647 Hspg2Q05793 3707 aaKnown RBP2.8□□□□□ -1.96
Trp53bp1-201ENSMUST00000110647 Crct1Q6PAI5 102 aa2.79□□□□□ -1.96
Trp53bp1-201ENSMUST00000110647 Gm10318A0A1W2P728 225 aa2.79□□□□□ -1.96
Trp53bp1-201ENSMUST00000110647 CubnQ9JLB4 3623 aa2.79□□□□□ -1.96
Trp53bp1-201ENSMUST00000110647 Krtap19-9bQ99NG9 58 aa2.78□□□□□ -1.96
Trp53bp1-201ENSMUST00000110647 Krtap1-5A2A590 122 aa2.75□□□□□ -1.97
Trp53bp1-201ENSMUST00000110647 Krtap7-1Q9D3I6 87 aa2.75□□□□□ -1.97
Trp53bp1-201ENSMUST00000110647 Dnah3Q8BW94 4083 aa2.74□□□□□ -1.97
Trp53bp1-201ENSMUST00000110647 Gm18596A0A1W2P860 280 aa2.74□□□□□ -1.97
Trp53bp1-201ENSMUST00000110647 Sprr2a3Q4KL71 83 aa2.72□□□□□ -1.97
Trp53bp1-201ENSMUST00000110647 Sprr2a1Q9CQK8 83 aa2.72□□□□□ -1.97
Trp53bp1-201ENSMUST00000110647 Krtap3-2Q9D638 99 aa2.7□□□□□ -1.98
Trp53bp1-201ENSMUST00000110647 Krtap3-3Q9D7P0 99 aa2.7□□□□□ -1.98
Trp53bp1-201ENSMUST00000110647 Gm19402J3QJV4 266 aa2.7□□□□□ -1.98
Trp53bp1-201ENSMUST00000110647 Dnah7bL7N1Y0 4068 aa2.69□□□□□ -1.98
Trp53bp1-201ENSMUST00000110647 Dnah7cA0A087WR13 4024 aa2.66□□□□□ -1.98
Trp53bp1-201ENSMUST00000110647 PrkdcP97313 4128 aa2.64□□□□□ -1.99
Trp53bp1-201ENSMUST00000110647 Krtap1-4Q3V2D6 188 aa2.64□□□□□ -1.99
Trp53bp1-201ENSMUST00000110647 TnxbO35452 4006 aa2.63□□□□□ -1.99
Retrieved 100 of 22,080 RNA–protein pairs in 82.6 ms