RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Brca2P97929 3329 aa6.21□□□□□ -1.42
Chd3-202ENSMUST00000108661 Cox6b2Q80ZN9 88 aa6.2□□□□□ -1.42
Chd3-202ENSMUST00000108661 Wdfy4E9Q2M9 3149 aa6.19□□□□□ -1.42
Chd3-202ENSMUST00000108661 Dmxl2Q8BPN8 3032 aa6.19□□□□□ -1.42
Chd3-202ENSMUST00000108661 NbeaQ9EPN1 2936 aa6.18□□□□□ -1.42
Chd3-202ENSMUST00000108661 Col6a3E9PWQ3 3284 aa6.18□□□□□ -1.42
Chd3-202ENSMUST00000108661 Dchs2A0A0A6YW72 3346 aa6.17□□□□□ -1.42
Chd3-202ENSMUST00000108661 VcanQ62059 3357 aa6.16□□□□□ -1.42
Chd3-202ENSMUST00000108661 Lrrc37aB1AWG4 3215 aa6.16□□□□□ -1.42
Chd3-202ENSMUST00000108661 Myo15aQ9QZZ4 3511 aa6.13□□□□□ -1.43
Chd3-202ENSMUST00000108661 Adgrg4B7ZCC9 3073 aa6.13□□□□□ -1.43
Chd3-202ENSMUST00000108661 Gm9918Q8BUR5 174 aa6.11□□□□□ -1.43
Chd3-202ENSMUST00000108661 Wdfy3Q6VNB8 3508 aa6.08□□□□□ -1.44
Chd3-202ENSMUST00000108661 Tex15F8VPN2 2785 aa6.08□□□□□ -1.44
Chd3-202ENSMUST00000108661 SpegQ62407 3262 aa6.08□□□□□ -1.44
Chd3-202ENSMUST00000108661 Tnp1P10856 55 aa6.07□□□□□ -1.44
Chd3-202ENSMUST00000108661 Srrm2Q8BTI8 2703 aaKnown RBP6.05□□□□□ -1.44
Chd3-202ENSMUST00000108661 DspE9Q557 2883 aaKnown RBP6.04□□□□□ -1.44
Chd3-202ENSMUST00000108661 FlncQ8VHX6 2726 aaKnown RBP6.03□□□□□ -1.44
Chd3-202ENSMUST00000108661 FrylF8VQ05 3007 aa6.02□□□□□ -1.45
Chd3-202ENSMUST00000108661 Dchs1E9PVD3 3291 aa6.01□□□□□ -1.45
Chd3-202ENSMUST00000108661 ApcQ61315 2845 aa5.99□□□□□ -1.45
Chd3-202ENSMUST00000108661 Gm9736A0A1W2P7N1 277 aa5.98□□□□□ -1.45
Chd3-202ENSMUST00000108661 SmcpP15265 143 aa5.98□□□□□ -1.45
Chd3-202ENSMUST00000108661 Nf1Q04690 2841 aa5.95□□□□□ -1.46
Chd3-202ENSMUST00000108661 DmdP11531 3678 aa5.94□□□□□ -1.46
Chd3-202ENSMUST00000108661 Gm10318A0A1W2P728 225 aa5.93□□□□□ -1.46
Chd3-202ENSMUST00000108661 Zzef1Q5SSH7 2924 aa5.93□□□□□ -1.46
Chd3-202ENSMUST00000108661 Chd9Q8BYH8 2885 aa5.91□□□□□ -1.46
Chd3-202ENSMUST00000108661 Trank1Q8BV79 2999 aa5.9□□□□□ -1.46
Chd3-202ENSMUST00000108661 Pdzd2E9Q1M1 2796 aa5.9□□□□□ -1.46
Chd3-202ENSMUST00000108661 TgO08710 2766 aa5.9□□□□□ -1.47
Chd3-202ENSMUST00000108661 LrbaQ9ESE1 2856 aa5.89□□□□□ -1.47
Chd3-202ENSMUST00000108661 Prm2P07978 107 aa5.87□□□□□ -1.47
Chd3-202ENSMUST00000108661 Gm40193A0A1B0GT39 78 aa5.86□□□□□ -1.47
Chd3-202ENSMUST00000108661 Gm20537G3UYK7 97 aa5.83□□□□□ -1.48
Chd3-202ENSMUST00000108661 Tenm2Q9WTS5 2764 aa5.83□□□□□ -1.48
Chd3-202ENSMUST00000108661 Tenm1Q9WTS4 2731 aa5.82□□□□□ -1.48
Chd3-202ENSMUST00000108661 Celsr2Q9R0M0 2920 aa5.82□□□□□ -1.48
Chd3-202ENSMUST00000108661 Vps13cQ8BX70 3748 aa5.79□□□□□ -1.48
Chd3-202ENSMUST00000108661 Tenm3Q9WTS6 2715 aa5.76□□□□□ -1.49
Chd3-202ENSMUST00000108661 Akap9Q70FJ1 3797 aa5.72□□□□□ -1.49
Chd3-202ENSMUST00000108661 Gm17416Q30KP4 66 aa5.72□□□□□ -1.49
Chd3-202ENSMUST00000108661 Crct1Q6PAI5 102 aa5.71□□□□□ -1.5
Chd3-202ENSMUST00000108661 B930094E09RikQ8C4T2 136 aa5.71□□□□□ -1.5
Chd3-202ENSMUST00000108661 Muc5acE9QAQ8 3455 aa5.7□□□□□ -1.5
Chd3-202ENSMUST00000108661 SpenQ62504 3644 aaKnown RBP5.69□□□□□ -1.5
Chd3-202ENSMUST00000108661 Gm884A2A9H6 3643 aa5.69□□□□□ -1.5
Chd3-202ENSMUST00000108661 Zfhx4Q9JJN2 3550 aa5.68□□□□□ -1.5
Chd3-202ENSMUST00000108661 Krtap19-5O08632 62 aa5.67□□□□□ -1.5
Chd3-202ENSMUST00000108661 RelnQ60841 3461 aa5.63□□□□□ -1.51
Chd3-202ENSMUST00000108661 2210017I01RikA0A0A6YVV1 95 aa5.6□□□□□ -1.51
Chd3-202ENSMUST00000108661 Csmd1Q923L3 3564 aa5.59□□□□□ -1.51
Chd3-202ENSMUST00000108661 OtogO55225 2910 aa5.57□□□□□ -1.52
Chd3-202ENSMUST00000108661 2310079G19RikQ9D6L6 185 aa5.56□□□□□ -1.52
Chd3-202ENSMUST00000108661 4933428G20RikQ9D3X4 101 aa5.54□□□□□ -1.52
Chd3-202ENSMUST00000108661 Megf8P60882 2789 aa5.52□□□□□ -1.53
Chd3-202ENSMUST00000108661 Smg1Q8BKX6 3658 aaKnown RBP5.51□□□□□ -1.53
Chd3-202ENSMUST00000108661 Ank2Q8C8R3 3898 aa5.5□□□□□ -1.53
Chd3-202ENSMUST00000108661 VwfQ8CIZ8 2813 aa5.49□□□□□ -1.53
Chd3-202ENSMUST00000108661 Gm18596A0A1W2P860 280 aa5.49□□□□□ -1.53
Chd3-202ENSMUST00000108661 Gm17402F6Z0L5 76 aa5.46□□□□□ -1.54
Chd3-202ENSMUST00000108661 Gm19668J3QMD1 248 aa5.45□□□□□ -1.54
Chd3-202ENSMUST00000108661 Helz2E9QAM5 2947 aaKnown RBP5.44□□□□□ -1.54
Chd3-202ENSMUST00000108661 Krtap13-1Q8K198 168 aa5.4□□□□□ -1.54
Chd3-202ENSMUST00000108661 Lama5Q61001 3718 aa5.4□□□□□ -1.55
Chd3-202ENSMUST00000108661 Cmya5Q70KF4 3739 aa5.4□□□□□ -1.55
Chd3-202ENSMUST00000108661 Gm6358A0A087WPH4 74 aa5.34□□□□□ -1.55
Chd3-202ENSMUST00000108661 Gm11939A2A592 99 aa5.33□□□□□ -1.56
Chd3-202ENSMUST00000108661 Sprr2kO70562 68 aa5.32□□□□□ -1.56
Chd3-202ENSMUST00000108661 Fbn1Q61554 2873 aaKnown RBP5.3□□□□□ -1.56
Chd3-202ENSMUST00000108661 Col7a1Q63870 2944 aa5.29□□□□□ -1.56
Chd3-202ENSMUST00000108661 Svep1A2AVA0 3567 aa5.27□□□□□ -1.57
Chd3-202ENSMUST00000108661 Csmd2V9GX34 3611 aa5.26□□□□□ -1.57
Chd3-202ENSMUST00000108661 Huwe1Q7TMY8 4377 aaKnown RBP5.2□□□□□ -1.58
Chd3-202ENSMUST00000108661 Krtap8-1O08633 61 aa5.18□□□□□ -1.58
Chd3-202ENSMUST00000108661 Gm19402J3QJV4 266 aa5.14□□□□□ -1.59
Chd3-202ENSMUST00000108661 LorP18165 486 aa5.11□□□□□ -1.59
Chd3-202ENSMUST00000108661 Muc6Q80T03 2850 aa5.08□□□□□ -1.6
Chd3-202ENSMUST00000108661 Krtap3-1A2A591 98 aa5.07□□□□□ -1.6
Chd3-202ENSMUST00000108661 Muc4Q8JZM8 3443 aa5.06□□□□□ -1.6
Chd3-202ENSMUST00000108661 Sprr2gO70558 76 aa5.06□□□□□ -1.6
Chd3-202ENSMUST00000108661 Krtap19-9aF8WH65 55 aa5.01□□□□□ -1.61
Chd3-202ENSMUST00000108661 Dnah14A0A140LIJ4 4489 aa4.99□□□□□ -1.61
Chd3-202ENSMUST00000108661 Lce1mQ9CR91 182 aa4.97□□□□□ -1.61
Chd3-202ENSMUST00000108661 LystP97412 3788 aa4.94□□□□□ -1.62
Chd3-202ENSMUST00000108661 CubnQ9JLB4 3623 aa4.92□□□□□ -1.62
Chd3-202ENSMUST00000108661 Krtap1-5A2A590 122 aa4.91□□□□□ -1.62
Chd3-202ENSMUST00000108661 Krtap3-2Q9D638 99 aa4.91□□□□□ -1.62
Chd3-202ENSMUST00000108661 Krtap3-3Q9D7P0 99 aa4.91□□□□□ -1.62
Chd3-202ENSMUST00000108661 BsnO88737 3942 aa4.88□□□□□ -1.63
Chd3-202ENSMUST00000108661 Krtap7-1Q9D3I6 87 aa4.85□□□□□ -1.63
Chd3-202ENSMUST00000108661 Krtap1-4Q3V2D6 188 aa4.83□□□□□ -1.64
Chd3-202ENSMUST00000108661 Csmd3Q80T79 3707 aa4.76□□□□□ -1.65
Chd3-202ENSMUST00000108661 Xirp2Q4U4S6 3784 aa4.76□□□□□ -1.65
Chd3-202ENSMUST00000108661 Vps13dB1ART2 4390 aa4.74□□□□□ -1.65
Chd3-202ENSMUST00000108661 Dnah10D3YYQ8 4591 aa4.74□□□□□ -1.65
Chd3-202ENSMUST00000108661 Krtap12-1Q9Z287 130 aa4.74□□□□□ -1.65
Chd3-202ENSMUST00000108661 Krtap19-9bQ99NG9 58 aa4.72□□□□□ -1.65
Chd3-202ENSMUST00000108661 TnxbO35452 4006 aa4.71□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 98.3 ms