RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 ApcQ61315 2845 aa8.21□□□□□ -1.1
Chd3-201ENSMUST00000092971 Lrrc37aB1AWG4 3215 aa8.21□□□□□ -1.1
Chd3-201ENSMUST00000092971 TgO08710 2766 aa8.19□□□□□ -1.1
Chd3-201ENSMUST00000092971 Srrm2Q8BTI8 2703 aaKnown RBP8.18□□□□□ -1.1
Chd3-201ENSMUST00000092971 Brca2P97929 3329 aa8.18□□□□□ -1.1
Chd3-201ENSMUST00000092971 Wdfy4E9Q2M9 3149 aa8.15□□□□□ -1.1
Chd3-201ENSMUST00000092971 Dmxl2Q8BPN8 3032 aa8.14□□□□□ -1.11
Chd3-201ENSMUST00000092971 Adgrg4B7ZCC9 3073 aa8.14□□□□□ -1.11
Chd3-201ENSMUST00000092971 Szt2A2A9C3 3431 aa8.12□□□□□ -1.11
Chd3-201ENSMUST00000092971 Zzef1Q5SSH7 2924 aa8.1□□□□□ -1.11
Chd3-201ENSMUST00000092971 Itpr2Q9Z329 2701 aa8.09□□□□□ -1.11
Chd3-201ENSMUST00000092971 Dchs2A0A0A6YW72 3346 aa8.07□□□□□ -1.12
Chd3-201ENSMUST00000092971 Gm20537G3UYK7 97 aa8.06□□□□□ -1.12
Chd3-201ENSMUST00000092971 Gm9918Q8BUR5 174 aa8.05□□□□□ -1.12
Chd3-201ENSMUST00000092971 Igfn1Q3KNY0 2849 aa8.04□□□□□ -1.12
Chd3-201ENSMUST00000092971 Zfhx3Q61329 3726 aa8.01□□□□□ -1.13
Chd3-201ENSMUST00000092971 Col6a3E9PWQ3 3284 aa8.01□□□□□ -1.13
Chd3-201ENSMUST00000092971 Celsr2Q9R0M0 2920 aa7.99□□□□□ -1.13
Chd3-201ENSMUST00000092971 LrbaQ9ESE1 2856 aa7.98□□□□□ -1.13
Chd3-201ENSMUST00000092971 Gm40193A0A1B0GT39 78 aa7.98□□□□□ -1.13
Chd3-201ENSMUST00000092971 NbeaQ9EPN1 2936 aa7.92□□□□□ -1.14
Chd3-201ENSMUST00000092971 B930094E09RikQ8C4T2 136 aa7.9□□□□□ -1.14
Chd3-201ENSMUST00000092971 Trank1Q8BV79 2999 aa7.9□□□□□ -1.15
Chd3-201ENSMUST00000092971 Prm2P07978 107 aa7.88□□□□□ -1.15
Chd3-201ENSMUST00000092971 Chd9Q8BYH8 2885 aa7.84□□□□□ -1.15
Chd3-201ENSMUST00000092971 Dchs1E9PVD3 3291 aa7.84□□□□□ -1.15
Chd3-201ENSMUST00000092971 Myo15aQ9QZZ4 3511 aa7.82□□□□□ -1.16
Chd3-201ENSMUST00000092971 FlncQ8VHX6 2726 aaKnown RBP7.82□□□□□ -1.16
Chd3-201ENSMUST00000092971 SpegQ62407 3262 aa7.81□□□□□ -1.16
Chd3-201ENSMUST00000092971 Pdzd2E9Q1M1 2796 aa7.78□□□□□ -1.16
Chd3-201ENSMUST00000092971 VcanQ62059 3357 aa7.77□□□□□ -1.16
Chd3-201ENSMUST00000092971 Gm9736A0A1W2P7N1 277 aa7.75□□□□□ -1.17
Chd3-201ENSMUST00000092971 A930033H14RikG5E8X6 103 aa7.73□□□□□ -1.17
Chd3-201ENSMUST00000092971 Gm10318A0A1W2P728 225 aa7.71□□□□□ -1.17
Chd3-201ENSMUST00000092971 Tenm4Q3UHK6 2771 aa7.68□□□□□ -1.18
Chd3-201ENSMUST00000092971 Helz2E9QAM5 2947 aaKnown RBP7.66□□□□□ -1.18
Chd3-201ENSMUST00000092971 Nf1Q04690 2841 aa7.66□□□□□ -1.18
Chd3-201ENSMUST00000092971 Tenm1Q9WTS4 2731 aa7.63□□□□□ -1.19
Chd3-201ENSMUST00000092971 2310079G19RikQ9D6L6 185 aa7.58□□□□□ -1.2
Chd3-201ENSMUST00000092971 Tenm3Q9WTS6 2715 aa7.55□□□□□ -1.2
Chd3-201ENSMUST00000092971 Wdfy3Q6VNB8 3508 aa7.55□□□□□ -1.2
Chd3-201ENSMUST00000092971 RelnQ60841 3461 aa7.54□□□□□ -1.2
Chd3-201ENSMUST00000092971 Akap9Q70FJ1 3797 aa7.51□□□□□ -1.21
Chd3-201ENSMUST00000092971 Muc5acE9QAQ8 3455 aa7.49□□□□□ -1.21
Chd3-201ENSMUST00000092971 Tenm2Q9WTS5 2764 aa7.45□□□□□ -1.22
Chd3-201ENSMUST00000092971 4933428G20RikQ9D3X4 101 aa7.43□□□□□ -1.22
Chd3-201ENSMUST00000092971 Megf8P60882 2789 aa7.42□□□□□ -1.22
Chd3-201ENSMUST00000092971 Crct1Q6PAI5 102 aa7.39□□□□□ -1.23
Chd3-201ENSMUST00000092971 Csmd1Q923L3 3564 aa7.35□□□□□ -1.23
Chd3-201ENSMUST00000092971 Gm17416Q30KP4 66 aa7.33□□□□□ -1.24
Chd3-201ENSMUST00000092971 2210017I01RikA0A0A6YVV1 95 aa7.31□□□□□ -1.24
Chd3-201ENSMUST00000092971 Vps13cQ8BX70 3748 aa7.29□□□□□ -1.24
Chd3-201ENSMUST00000092971 Gm19668J3QMD1 248 aa7.28□□□□□ -1.24
Chd3-201ENSMUST00000092971 VwfQ8CIZ8 2813 aa7.25□□□□□ -1.25
Chd3-201ENSMUST00000092971 OtogO55225 2910 aa7.2□□□□□ -1.26
Chd3-201ENSMUST00000092971 DmdP11531 3678 aa7.18□□□□□ -1.26
Chd3-201ENSMUST00000092971 Gm17402F6Z0L5 76 aa7.17□□□□□ -1.26
Chd3-201ENSMUST00000092971 Smg1Q8BKX6 3658 aaKnown RBP7.12□□□□□ -1.27
Chd3-201ENSMUST00000092971 Gm6358A0A087WPH4 74 aa7.08□□□□□ -1.28
Chd3-201ENSMUST00000092971 Krtap13-1Q8K198 168 aa7.07□□□□□ -1.28
Chd3-201ENSMUST00000092971 SpenQ62504 3644 aaKnown RBP7.03□□□□□ -1.28
Chd3-201ENSMUST00000092971 Gm11939A2A592 99 aa6.99□□□□□ -1.29
Chd3-201ENSMUST00000092971 Lama5Q61001 3718 aa6.92□□□□□ -1.3
Chd3-201ENSMUST00000092971 Zfhx4Q9JJN2 3550 aa6.89□□□□□ -1.31
Chd3-201ENSMUST00000092971 Krtap19-5O08632 62 aa6.89□□□□□ -1.31
Chd3-201ENSMUST00000092971 Col7a1Q63870 2944 aa6.88□□□□□ -1.31
Chd3-201ENSMUST00000092971 Fbn1Q61554 2873 aaKnown RBP6.8□□□□□ -1.32
Chd3-201ENSMUST00000092971 Cmya5Q70KF4 3739 aa6.79□□□□□ -1.32
Chd3-201ENSMUST00000092971 Krtap3-1A2A591 98 aa6.79□□□□□ -1.32
Chd3-201ENSMUST00000092971 Krtap3-2Q9D638 99 aa6.73□□□□□ -1.33
Chd3-201ENSMUST00000092971 Krtap3-3Q9D7P0 99 aa6.73□□□□□ -1.33
Chd3-201ENSMUST00000092971 Svep1A2AVA0 3567 aa6.71□□□□□ -1.34
Chd3-201ENSMUST00000092971 Gm884A2A9H6 3643 aa6.61□□□□□ -1.35
Chd3-201ENSMUST00000092971 Krtap7-1Q9D3I6 87 aa6.61□□□□□ -1.35
Chd3-201ENSMUST00000092971 Muc4Q8JZM8 3443 aa6.59□□□□□ -1.35
Chd3-201ENSMUST00000092971 Csmd2V9GX34 3611 aa6.59□□□□□ -1.35
Chd3-201ENSMUST00000092971 Sprr2kO70562 68 aa6.56□□□□□ -1.36
Chd3-201ENSMUST00000092971 LystP97412 3788 aa6.55□□□□□ -1.36
Chd3-201ENSMUST00000092971 Krtap8-1O08633 61 aa6.5□□□□□ -1.37
Chd3-201ENSMUST00000092971 Muc6Q80T03 2850 aa6.45□□□□□ -1.38
Chd3-201ENSMUST00000092971 Gm18596A0A1W2P860 280 aa6.43□□□□□ -1.38
Chd3-201ENSMUST00000092971 LorP18165 486 aa6.36□□□□□ -1.39
Chd3-201ENSMUST00000092971 Krtap19-9aF8WH65 55 aa6.34□□□□□ -1.39
Chd3-201ENSMUST00000092971 Gm19402J3QJV4 266 aa6.3□□□□□ -1.4
Chd3-201ENSMUST00000092971 CubnQ9JLB4 3623 aa6.28□□□□□ -1.4
Chd3-201ENSMUST00000092971 Sprr2a3Q4KL71 83 aa6.27□□□□□ -1.41
Chd3-201ENSMUST00000092971 Sprr2a1Q9CQK8 83 aa6.27□□□□□ -1.41
Chd3-201ENSMUST00000092971 Csmd3Q80T79 3707 aa6.27□□□□□ -1.41
Chd3-201ENSMUST00000092971 Ank2Q8C8R3 3898 aa6.26□□□□□ -1.41
Chd3-201ENSMUST00000092971 Dnah10D3YYQ8 4591 aa6.23□□□□□ -1.41
Chd3-201ENSMUST00000092971 Dnah14A0A140LIJ4 4489 aa6.22□□□□□ -1.41
Chd3-201ENSMUST00000092971 Krtap1-5A2A590 122 aa6.21□□□□□ -1.42
Chd3-201ENSMUST00000092971 Krtap1-4Q3V2D6 188 aa6.18□□□□□ -1.42
Chd3-201ENSMUST00000092971 Krtap19-9bQ99NG9 58 aa6.17□□□□□ -1.42
Chd3-201ENSMUST00000092971 Krtap12-1Q9Z287 130 aa6.17□□□□□ -1.42
Chd3-201ENSMUST00000092971 Sprr2gO70558 76 aa6.14□□□□□ -1.43
Chd3-201ENSMUST00000092971 Huwe1Q7TMY8 4377 aaKnown RBP6.13□□□□□ -1.43
Chd3-201ENSMUST00000092971 Dnah5Q8VHE6 4621 aa6.08□□□□□ -1.44
Chd3-201ENSMUST00000092971 Hspg2Q05793 3707 aaKnown RBP6.03□□□□□ -1.44
Chd3-201ENSMUST00000092971 Lce3bQ9CQM7 98 aa5.89□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 118.4 ms