RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Gm20537G3UYK7 97 aa11.29□□□□□ -0.6
Smarcc1-201ENSMUST00000088716 Unc80Q8BLN6 3261 aa11.28□□□□□ -0.6
Smarcc1-201ENSMUST00000088716 Adgrg4B7ZCC9 3073 aa11.27□□□□□ -0.61
Smarcc1-201ENSMUST00000088716 Lrrc37aB1AWG4 3215 aa11.26□□□□□ -0.61
Smarcc1-201ENSMUST00000088716 Szt2A2A9C3 3431 aa11.26□□□□□ -0.61
Smarcc1-201ENSMUST00000088716 A930033H14RikG5E8X6 103 aa11.25□□□□□ -0.61
Smarcc1-201ENSMUST00000088716 NbeaQ9EPN1 2936 aa11.24□□□□□ -0.61
Smarcc1-201ENSMUST00000088716 FryE9Q8I9 3020 aa11.23□□□□□ -0.61
Smarcc1-201ENSMUST00000088716 Zzef1Q5SSH7 2924 aa11.21□□□□□ -0.62
Smarcc1-201ENSMUST00000088716 Wdfy4E9Q2M9 3149 aa11.19□□□□□ -0.62
Smarcc1-201ENSMUST00000088716 B930094E09RikQ8C4T2 136 aa11.17□□□□□ -0.62
Smarcc1-201ENSMUST00000088716 Celsr3Q91ZI0 3301 aa11.15□□□□□ -0.62
Smarcc1-201ENSMUST00000088716 Dmxl2Q8BPN8 3032 aa11.14□□□□□ -0.63
Smarcc1-201ENSMUST00000088716 Gm9112A2AI92 75 aa11.12□□□□□ -0.63
Smarcc1-201ENSMUST00000088716 FrylF8VQ05 3007 aa11.09□□□□□ -0.63
Smarcc1-201ENSMUST00000088716 2310079G19RikQ9D6L6 185 aa11.05□□□□□ -0.64
Smarcc1-201ENSMUST00000088716 Pdzd2E9Q1M1 2796 aa11.04□□□□□ -0.64
Smarcc1-201ENSMUST00000088716 Lama1P19137 3084 aa11.03□□□□□ -0.64
Smarcc1-201ENSMUST00000088716 Gm17416Q30KP4 66 aa10.99□□□□□ -0.65
Smarcc1-201ENSMUST00000088716 FlncQ8VHX6 2726 aaKnown RBP10.98□□□□□ -0.65
Smarcc1-201ENSMUST00000088716 Celsr2Q9R0M0 2920 aa10.97□□□□□ -0.65
Smarcc1-201ENSMUST00000088716 Tenm3Q9WTS6 2715 aa10.93□□□□□ -0.66
Smarcc1-201ENSMUST00000088716 Dchs2A0A0A6YW72 3346 aa10.93□□□□□ -0.66
Smarcc1-201ENSMUST00000088716 Zfhx3Q61329 3726 aa10.92□□□□□ -0.66
Smarcc1-201ENSMUST00000088716 Gm9736A0A1W2P7N1 277 aa10.89□□□□□ -0.67
Smarcc1-201ENSMUST00000088716 Brca2P97929 3329 aa10.89□□□□□ -0.67
Smarcc1-201ENSMUST00000088716 Nf1Q04690 2841 aa10.87□□□□□ -0.67
Smarcc1-201ENSMUST00000088716 DspE9Q557 2883 aaKnown RBP10.84□□□□□ -0.67
Smarcc1-201ENSMUST00000088716 Trank1Q8BV79 2999 aa10.84□□□□□ -0.67
Smarcc1-201ENSMUST00000088716 2210017I01RikA0A0A6YVV1 95 aa10.79□□□□□ -0.68
Smarcc1-201ENSMUST00000088716 Chd9Q8BYH8 2885 aa10.75□□□□□ -0.69
Smarcc1-201ENSMUST00000088716 Gm17402F6Z0L5 76 aa10.68□□□□□ -0.7
Smarcc1-201ENSMUST00000088716 Tenm1Q9WTS4 2731 aa10.67□□□□□ -0.7
Smarcc1-201ENSMUST00000088716 Col6a3E9PWQ3 3284 aa10.67□□□□□ -0.7
Smarcc1-201ENSMUST00000088716 LrbaQ9ESE1 2856 aa10.67□□□□□ -0.7
Smarcc1-201ENSMUST00000088716 Tenm2Q9WTS5 2764 aa10.62□□□□□ -0.71
Smarcc1-201ENSMUST00000088716 Prm2P07978 107 aa10.6□□□□□ -0.71
Smarcc1-201ENSMUST00000088716 Gm9918Q8BUR5 174 aa10.53□□□□□ -0.72
Smarcc1-201ENSMUST00000088716 VcanQ62059 3357 aa10.42□□□□□ -0.74
Smarcc1-201ENSMUST00000088716 Dchs1E9PVD3 3291 aa10.39□□□□□ -0.75
Smarcc1-201ENSMUST00000088716 Gm11939A2A592 99 aa10.36□□□□□ -0.75
Smarcc1-201ENSMUST00000088716 Helz2E9QAM5 2947 aaKnown RBP10.35□□□□□ -0.75
Smarcc1-201ENSMUST00000088716 Megf8P60882 2789 aa10.33□□□□□ -0.76
Smarcc1-201ENSMUST00000088716 Gm19668J3QMD1 248 aa10.32□□□□□ -0.76
Smarcc1-201ENSMUST00000088716 Gm10318A0A1W2P728 225 aa10.32□□□□□ -0.76
Smarcc1-201ENSMUST00000088716 SpegQ62407 3262 aa10.29□□□□□ -0.76
Smarcc1-201ENSMUST00000088716 Krtap19-5O08632 62 aa10.29□□□□□ -0.76
Smarcc1-201ENSMUST00000088716 Myo15aQ9QZZ4 3511 aa10.27□□□□□ -0.77
Smarcc1-201ENSMUST00000088716 RelnQ60841 3461 aa10.26□□□□□ -0.77
Smarcc1-201ENSMUST00000088716 Vps13cQ8BX70 3748 aa10.24□□□□□ -0.77
Smarcc1-201ENSMUST00000088716 Krtap13-1Q8K198 168 aa10.22□□□□□ -0.77
Smarcc1-201ENSMUST00000088716 Akap9Q70FJ1 3797 aa10.22□□□□□ -0.77
Smarcc1-201ENSMUST00000088716 Muc5acE9QAQ8 3455 aa10.16□□□□□ -0.78
Smarcc1-201ENSMUST00000088716 Crct1Q6PAI5 102 aa10.12□□□□□ -0.79
Smarcc1-201ENSMUST00000088716 Wdfy3Q6VNB8 3508 aa10.11□□□□□ -0.79
Smarcc1-201ENSMUST00000088716 4933428G20RikQ9D3X4 101 aa10.06□□□□□ -0.8
Smarcc1-201ENSMUST00000088716 OtogO55225 2910 aa10.01□□□□□ -0.81
Smarcc1-201ENSMUST00000088716 DmdP11531 3678 aa9.98□□□□□ -0.81
Smarcc1-201ENSMUST00000088716 Krtap3-1A2A591 98 aa9.97□□□□□ -0.81
Smarcc1-201ENSMUST00000088716 Krtap3-2Q9D638 99 aa9.94□□□□□ -0.82
Smarcc1-201ENSMUST00000088716 Krtap3-3Q9D7P0 99 aa9.94□□□□□ -0.82
Smarcc1-201ENSMUST00000088716 VwfQ8CIZ8 2813 aa9.94□□□□□ -0.82
Smarcc1-201ENSMUST00000088716 Fbn1Q61554 2873 aaKnown RBP9.77□□□□□ -0.84
Smarcc1-201ENSMUST00000088716 Csmd1Q923L3 3564 aa9.68□□□□□ -0.86
Smarcc1-201ENSMUST00000088716 Ank2Q8C8R3 3898 aa9.56□□□□□ -0.88
Smarcc1-201ENSMUST00000088716 Lama5Q61001 3718 aa9.55□□□□□ -0.88
Smarcc1-201ENSMUST00000088716 Smg1Q8BKX6 3658 aaKnown RBP9.54□□□□□ -0.88
Smarcc1-201ENSMUST00000088716 Col7a1Q63870 2944 aa9.39□□□□□ -0.91
Smarcc1-201ENSMUST00000088716 Gm6358A0A087WPH4 74 aa9.38□□□□□ -0.91
Smarcc1-201ENSMUST00000088716 Krtap1-5A2A590 122 aa9.37□□□□□ -0.91
Smarcc1-201ENSMUST00000088716 Zfhx4Q9JJN2 3550 aa9.29□□□□□ -0.92
Smarcc1-201ENSMUST00000088716 Sprr2a3Q4KL71 83 aa9.28□□□□□ -0.92
Smarcc1-201ENSMUST00000088716 Sprr2a1Q9CQK8 83 aa9.28□□□□□ -0.92
Smarcc1-201ENSMUST00000088716 Krtap19-9aF8WH65 55 aa9.27□□□□□ -0.93
Smarcc1-201ENSMUST00000088716 SpenQ62504 3644 aaKnown RBP9.21□□□□□ -0.94
Smarcc1-201ENSMUST00000088716 Huwe1Q7TMY8 4377 aaKnown RBP9.21□□□□□ -0.94
Smarcc1-201ENSMUST00000088716 Krtap8-1O08633 61 aa9.19□□□□□ -0.94
Smarcc1-201ENSMUST00000088716 Dnah14A0A140LIJ4 4489 aa9.18□□□□□ -0.94
Smarcc1-201ENSMUST00000088716 Muc6Q80T03 2850 aa9.17□□□□□ -0.94
Smarcc1-201ENSMUST00000088716 Krtap7-1Q9D3I6 87 aa9.13□□□□□ -0.95
Smarcc1-201ENSMUST00000088716 Krtap1-4Q3V2D6 188 aa9.12□□□□□ -0.95
Smarcc1-201ENSMUST00000088716 Gm18596A0A1W2P860 280 aa9.08□□□□□ -0.96
Smarcc1-201ENSMUST00000088716 Gm884A2A9H6 3643 aa9.08□□□□□ -0.96
Smarcc1-201ENSMUST00000088716 LorP18165 486 aa9.04□□□□□ -0.96
Smarcc1-201ENSMUST00000088716 Cmya5Q70KF4 3739 aa9.04□□□□□ -0.96
Smarcc1-201ENSMUST00000088716 Dnah5Q8VHE6 4621 aa8.98□□□□□ -0.97
Smarcc1-201ENSMUST00000088716 Dnah10D3YYQ8 4591 aa8.97□□□□□ -0.97
Smarcc1-201ENSMUST00000088716 Krtap19-9bQ99NG9 58 aa8.97□□□□□ -0.97
Smarcc1-201ENSMUST00000088716 Svep1A2AVA0 3567 aa8.93□□□□□ -0.98
Smarcc1-201ENSMUST00000088716 Sprr2kO70562 68 aa8.93□□□□□ -0.98
Smarcc1-201ENSMUST00000088716 Stard9Q80TF6 4561 aa8.88□□□□□ -0.99
Smarcc1-201ENSMUST00000088716 Muc4Q8JZM8 3443 aa8.87□□□□□ -0.99
Smarcc1-201ENSMUST00000088716 Krtap12-1Q9Z287 130 aa8.83□□□□□ -1
Smarcc1-201ENSMUST00000088716 Vps13dB1ART2 4390 aa8.83□□□□□ -1
Smarcc1-201ENSMUST00000088716 Csmd2V9GX34 3611 aa8.8□□□□□ -1
Smarcc1-201ENSMUST00000088716 Gm19402J3QJV4 266 aa8.75□□□□□ -1.01
Smarcc1-201ENSMUST00000088716 PlecQ9QXS1 4691 aaKnown RBP8.75□□□□□ -1.01
Smarcc1-201ENSMUST00000088716 Dnah17Q69Z23 4481 aa8.66□□□□□ -1.02
Smarcc1-201ENSMUST00000088716 LystP97412 3788 aa8.62□□□□□ -1.03
Smarcc1-201ENSMUST00000088716 Sprr2gO70558 76 aa8.46□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 81.4 ms