RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Pkd1l1Q8R526 2615 aa8,85□□□□□ -0,99
Col17a1-202ENSMUST00000086923 Tnp1P10856 55 aa8,84□□□□□ -0,99
Col17a1-202ENSMUST00000086923 Celsr1O35161 3034 aa8,8□□□□□ -1
Col17a1-202ENSMUST00000086923 FryE9Q8I9 3020 aa8,8□□□□□ -1
Col17a1-202ENSMUST00000086923 2310079G19RikQ9D6L6 185 aa8,78□□□□□ -1
Col17a1-202ENSMUST00000086923 Igfn1Q3KNY0 2849 aa8,77□□□□□ -1,01
Col17a1-202ENSMUST00000086923 Srrm2Q8BTI8 2703 aaKnown RBP8,76□□□□□ -1,01
Col17a1-202ENSMUST00000086923 VcanQ62059 3357 aa8,76□□□□□ -1,01
Col17a1-202ENSMUST00000086923 Dmxl2Q8BPN8 3032 aa8,75□□□□□ -1,01
Col17a1-202ENSMUST00000086923 NbeaQ9EPN1 2936 aa8,75□□□□□ -1,01
Col17a1-202ENSMUST00000086923 Hivep1Q03172 2688 aa8,72□□□□□ -1,01
Col17a1-202ENSMUST00000086923 B930094E09RikQ8C4T2 136 aa8,71□□□□□ -1,01
Col17a1-202ENSMUST00000086923 A930033H14RikG5E8X6 103 aa8,69□□□□□ -1,02
Col17a1-202ENSMUST00000086923 Gm9507D3Z5T3 223 aa8,69□□□□□ -1,02
Col17a1-202ENSMUST00000086923 Adgrg4B7ZCC9 3073 aa8,67□□□□□ -1,02
Col17a1-202ENSMUST00000086923 Krtap10-4Q08EG8 221 aa8,65□□□□□ -1,02
Col17a1-202ENSMUST00000086923 Wdfy3Q6VNB8 3508 aa8,64□□□□□ -1,03
Col17a1-202ENSMUST00000086923 Dchs2A0A0A6YW72 3346 aa8,59□□□□□ -1,03
Col17a1-202ENSMUST00000086923 Dchs1E9PVD3 3291 aa8,52□□□□□ -1,05
Col17a1-202ENSMUST00000086923 Zzef1Q5SSH7 2924 aa8,52□□□□□ -1,05
Col17a1-202ENSMUST00000086923 Krtap10-10A0A1W2P7T6 217 aa8,51□□□□□ -1,05
Col17a1-202ENSMUST00000086923 FlncQ8VHX6 2726 aaKnown RBP8,5□□□□□ -1,05
Col17a1-202ENSMUST00000086923 FcgbpE9Q0B5 2583 aa8,5□□□□□ -1,05
Col17a1-202ENSMUST00000086923 SpegQ62407 3262 aa8,49□□□□□ -1,05
Col17a1-202ENSMUST00000086923 DmdP11531 3678 aa8,47□□□□□ -1,05
Col17a1-202ENSMUST00000086923 Myo15aQ9QZZ4 3511 aa8,45□□□□□ -1,06
Col17a1-202ENSMUST00000086923 LrbaQ9ESE1 2856 aa8,45□□□□□ -1,06
Col17a1-202ENSMUST00000086923 RelnQ60841 3461 aa8,43□□□□□ -1,06
Col17a1-202ENSMUST00000086923 Celsr2Q9R0M0 2920 aa8,4□□□□□ -1,06
Col17a1-202ENSMUST00000086923 Trank1Q8BV79 2999 aa8,39□□□□□ -1,07
Col17a1-202ENSMUST00000086923 Itpr2Q9Z329 2701 aa8,38□□□□□ -1,07
Col17a1-202ENSMUST00000086923 Chd9Q8BYH8 2885 aa8,29□□□□□ -1,08
Col17a1-202ENSMUST00000086923 Helz2E9QAM5 2947 aaKnown RBP8,25□□□□□ -1,09
Col17a1-202ENSMUST00000086923 Vps13cQ8BX70 3748 aa8,23□□□□□ -1,09
Col17a1-202ENSMUST00000086923 Gm2696A0A1W2P709 240 aa8,22□□□□□ -1,09
Col17a1-202ENSMUST00000086923 Akap9Q70FJ1 3797 aa8,22□□□□□ -1,09
Col17a1-202ENSMUST00000086923 Tenm4Q3UHK6 2771 aa8,2□□□□□ -1,1
Col17a1-202ENSMUST00000086923 Nf1Q04690 2841 aa8,2□□□□□ -1,1
Col17a1-202ENSMUST00000086923 Zfhx3Q61329 3726 aa8,17□□□□□ -1,1
Col17a1-202ENSMUST00000086923 Pdzd2E9Q1M1 2796 aa8,17□□□□□ -1,1
Col17a1-202ENSMUST00000086923 Gm17402F6Z0L5 76 aa8,15□□□□□ -1,11
Col17a1-202ENSMUST00000086923 Tenm3Q9WTS6 2715 aa8,14□□□□□ -1,11
Col17a1-202ENSMUST00000086923 Gm17416Q30KP4 66 aa8,1□□□□□ -1,11
Col17a1-202ENSMUST00000086923 Zfhx4Q9JJN2 3550 aa8,03□□□□□ -1,12
Col17a1-202ENSMUST00000086923 2210017I01RikA0A0A6YVV1 95 aa8,03□□□□□ -1,12
Col17a1-202ENSMUST00000086923 Muc5acE9QAQ8 3455 aa7,98□□□□□ -1,13
Col17a1-202ENSMUST00000086923 Megf8P60882 2789 aa7,94□□□□□ -1,14
Col17a1-202ENSMUST00000086923 Lama5Q61001 3718 aa7,92□□□□□ -1,14
Col17a1-202ENSMUST00000086923 Smg1Q8BKX6 3658 aaKnown RBP7,89□□□□□ -1,15
Col17a1-202ENSMUST00000086923 SpenQ62504 3644 aaKnown RBP7,86□□□□□ -1,15
Col17a1-202ENSMUST00000086923 4933428G20RikQ9D3X4 101 aa7,85□□□□□ -1,15
Col17a1-202ENSMUST00000086923 Tenm1Q9WTS4 2731 aa7,83□□□□□ -1,16
Col17a1-202ENSMUST00000086923 Csmd1Q923L3 3564 aa7,82□□□□□ -1,16
Col17a1-202ENSMUST00000086923 Krtap3-2Q9D638 99 aa7,79□□□□□ -1,16
Col17a1-202ENSMUST00000086923 Krtap3-3Q9D7P0 99 aa7,79□□□□□ -1,16
Col17a1-202ENSMUST00000086923 Krtap13-1Q8K198 168 aa7,77□□□□□ -1,17
Col17a1-202ENSMUST00000086923 Gm884A2A9H6 3643 aa7,76□□□□□ -1,17
Col17a1-202ENSMUST00000086923 OtogO55225 2910 aa7,75□□□□□ -1,17
Col17a1-202ENSMUST00000086923 Gm11939A2A592 99 aa7,75□□□□□ -1,17
Col17a1-202ENSMUST00000086923 Gm19668J3QMD1 248 aa7,71□□□□□ -1,18
Col17a1-202ENSMUST00000086923 Krtap7-1Q9D3I6 87 aa7,65□□□□□ -1,18
Col17a1-202ENSMUST00000086923 Gm9736A0A1W2P7N1 277 aa7,65□□□□□ -1,18
Col17a1-202ENSMUST00000086923 Krtap3-1A2A591 98 aa7,64□□□□□ -1,19
Col17a1-202ENSMUST00000086923 Gm9918Q8BUR5 174 aa7,59□□□□□ -1,19
Col17a1-202ENSMUST00000086923 Svep1A2AVA0 3567 aa7,54□□□□□ -1,2
Col17a1-202ENSMUST00000086923 Fbn1Q61554 2873 aaKnown RBP7,54□□□□□ -1,2
Col17a1-202ENSMUST00000086923 Tenm2Q9WTS5 2764 aa7,48□□□□□ -1,21
Col17a1-202ENSMUST00000086923 Muc4Q8JZM8 3443 aa7,39□□□□□ -1,23
Col17a1-202ENSMUST00000086923 Cmya5Q70KF4 3739 aa7,37□□□□□ -1,23
Col17a1-202ENSMUST00000086923 VwfQ8CIZ8 2813 aa7,33□□□□□ -1,24
Col17a1-202ENSMUST00000086923 Gm10318A0A1W2P728 225 aa7,32□□□□□ -1,24
Col17a1-202ENSMUST00000086923 Col7a1Q63870 2944 aa7,3□□□□□ -1,24
Col17a1-202ENSMUST00000086923 Ank2Q8C8R3 3898 aa7,27□□□□□ -1,24
Col17a1-202ENSMUST00000086923 Csmd2V9GX34 3611 aa7,22□□□□□ -1,25
Col17a1-202ENSMUST00000086923 Sprr2a3Q4KL71 83 aa7,12□□□□□ -1,27
Col17a1-202ENSMUST00000086923 Sprr2a1Q9CQK8 83 aa7,12□□□□□ -1,27
Col17a1-202ENSMUST00000086923 Muc6Q80T03 2850 aa7,11□□□□□ -1,27
Col17a1-202ENSMUST00000086923 Krtap19-5O08632 62 aa7,02□□□□□ -1,29
Col17a1-202ENSMUST00000086923 Crct1Q6PAI5 102 aa7,02□□□□□ -1,29
Col17a1-202ENSMUST00000086923 Gm19402J3QJV4 266 aa6,94□□□□□ -1,3
Col17a1-202ENSMUST00000086923 LystP97412 3788 aa6,93□□□□□ -1,3
Col17a1-202ENSMUST00000086923 Krtap1-5A2A590 122 aa6,83□□□□□ -1,32
Col17a1-202ENSMUST00000086923 CubnQ9JLB4 3623 aa6,81□□□□□ -1,32
Col17a1-202ENSMUST00000086923 Dnah14A0A140LIJ4 4489 aa6,8□□□□□ -1,32
Col17a1-202ENSMUST00000086923 Gm6358A0A087WPH4 74 aa6,74□□□□□ -1,33
Col17a1-202ENSMUST00000086923 BsnO88737 3942 aa6,69□□□□□ -1,34
Col17a1-202ENSMUST00000086923 Xirp2Q4U4S6 3784 aa6,68□□□□□ -1,34
Col17a1-202ENSMUST00000086923 Krtap19-9bQ99NG9 58 aa6,64□□□□□ -1,35
Col17a1-202ENSMUST00000086923 Krtap12-1Q9Z287 130 aa6,63□□□□□ -1,35
Col17a1-202ENSMUST00000086923 Huwe1Q7TMY8 4377 aaKnown RBP6,62□□□□□ -1,35
Col17a1-202ENSMUST00000086923 Krtap19-9aF8WH65 55 aa6,6□□□□□ -1,35
Col17a1-202ENSMUST00000086923 Krtap1-4Q3V2D6 188 aa6,59□□□□□ -1,35
Col17a1-202ENSMUST00000086923 Dnah10D3YYQ8 4591 aa6,56□□□□□ -1,36
Col17a1-202ENSMUST00000086923 Hspg2Q05793 3707 aaKnown RBP6,5□□□□□ -1,37
Col17a1-202ENSMUST00000086923 Csmd3Q80T79 3707 aa6,46□□□□□ -1,37
Col17a1-202ENSMUST00000086923 Dnah5Q8VHE6 4621 aa6,4□□□□□ -1,39
Col17a1-202ENSMUST00000086923 Dnah17Q69Z23 4481 aa6,38□□□□□ -1,39
Col17a1-202ENSMUST00000086923 Gm18596A0A1W2P860 280 aa6,38□□□□□ -1,39
Col17a1-202ENSMUST00000086923 Krtap8-1O08633 61 aa6,35□□□□□ -1,39
Col17a1-202ENSMUST00000086923 PlecQ9QXS1 4691 aaKnown RBP6,33□□□□□ -1,4
Retrieved 100 of 22,080 RNA–protein pairs in 11,3 ms