RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Gm9508A0A1W2P7W0 230 aa9.22□□□□□ -0.93
Casc4-201ENSMUST00000078752 FcgbpE9Q0B5 2583 aa9.19□□□□□ -0.94
Casc4-201ENSMUST00000078752 Tenm4Q3UHK6 2771 aa9.17□□□□□ -0.94
Casc4-201ENSMUST00000078752 RetnlbQ99P86 105 aa9.17□□□□□ -0.94
Casc4-201ENSMUST00000078752 Defb11Q8R2I7 77 aa9.14□□□□□ -0.95
Casc4-201ENSMUST00000078752 Gm10139O88245 57 aa9.13□□□□□ -0.95
Casc4-201ENSMUST00000078752 Tenm1Q9WTS4 2731 aa9.08□□□□□ -0.96
Casc4-201ENSMUST00000078752 Gm2310J3QNJ2 377 aa9.07□□□□□ -0.96
Casc4-201ENSMUST00000078752 Sprr1aQ62266 144 aa9.06□□□□□ -0.96
Casc4-201ENSMUST00000078752 Gm11565A2A4M7 156 aa9.05□□□□□ -0.96
Casc4-201ENSMUST00000078752 Romo1P60603 79 aa9.02□□□□□ -0.97
Casc4-201ENSMUST00000078752 LystP97412 3788 aa8.92□□□□□ -0.98
Casc4-201ENSMUST00000078752 Gm17349F7BGH6 99 aa8.88□□□□□ -0.99
Casc4-201ENSMUST00000078752 Ndufaf8A2AMZ4 74 aa8.87□□□□□ -0.99
Casc4-201ENSMUST00000078752 Col7a1Q63870 2944 aa8.87□□□□□ -0.99
Casc4-201ENSMUST00000078752 Gm16253D3Z167 63 aa8.87□□□□□ -0.99
Casc4-201ENSMUST00000078752 Gm4491E0CX42 125 aa8.85□□□□□ -0.99
Casc4-201ENSMUST00000078752 Prm2P07978 107 aa8.83□□□□□ -1
Casc4-201ENSMUST00000078752 Gm9507D3Z5T3 223 aa8.82□□□□□ -1
Casc4-201ENSMUST00000078752 Krtap14O08640 167 aa8.81□□□□□ -1
Casc4-201ENSMUST00000078752 Gm9955Q8CEJ8 102 aa8.81□□□□□ -1
Casc4-201ENSMUST00000078752 Fbn1Q61554 2873 aaKnown RBP8.8□□□□□ -1
Casc4-201ENSMUST00000078752 Krtap10-4Q08EG8 221 aa8.76□□□□□ -1.01
Casc4-201ENSMUST00000078752 Csmd2V9GX34 3611 aa8.76□□□□□ -1.01
Casc4-201ENSMUST00000078752 Gm10382Q3V0T5 144 aa8.76□□□□□ -1.01
Casc4-201ENSMUST00000078752 CubnQ9JLB4 3623 aa8.73□□□□□ -1.01
Casc4-201ENSMUST00000078752 Krtap13O88375 197 aa8.72□□□□□ -1.01
Casc4-201ENSMUST00000078752 AW011738F6S7Q2 159 aa8.72□□□□□ -1.01
Casc4-201ENSMUST00000078752 NbdyA0A0N4SUI7 68 aa8.72□□□□□ -1.01
Casc4-201ENSMUST00000078752 Gm10065F6TJM2 114 aa8.69□□□□□ -1.02
Casc4-201ENSMUST00000078752 VwfQ8CIZ8 2813 aa8.69□□□□□ -1.02
Casc4-201ENSMUST00000078752 Rpl37Q9D823 97 aa8.67□□□□□ -1.02
Casc4-201ENSMUST00000078752 Krtap10-10A0A1W2P7T6 217 aa8.59□□□□□ -1.03
Casc4-201ENSMUST00000078752 2310050C09RikG5E8Z3 280 aa8.57□□□□□ -1.04
Casc4-201ENSMUST00000078752 Tenm2Q9WTS5 2764 aa8.55□□□□□ -1.04
Casc4-201ENSMUST00000078752 Gm20537G3UYK7 97 aa8.53□□□□□ -1.04
Casc4-201ENSMUST00000078752 D6Ertd527eA0A0N4SWI3 464 aa8.51□□□□□ -1.05
Casc4-201ENSMUST00000078752 2310061N02RikQ9D6S9 174 aa8.51□□□□□ -1.05
Casc4-201ENSMUST00000078752 Gm9112A2AI92 75 aa8.5□□□□□ -1.05
Casc4-201ENSMUST00000078752 Cox6b2Q80ZN9 88 aa8.42□□□□□ -1.06
Casc4-201ENSMUST00000078752 Gm2696A0A1W2P709 240 aa8.36□□□□□ -1.07
Casc4-201ENSMUST00000078752 Muc6Q80T03 2850 aa8.36□□□□□ -1.07
Casc4-201ENSMUST00000078752 Megf8P60882 2789 aa8.35□□□□□ -1.07
Casc4-201ENSMUST00000078752 Krtap29-1A2A5X4 342 aa8.35□□□□□ -1.07
Casc4-201ENSMUST00000078752 Krtap15-1Q9QZU5 150 aa8.33□□□□□ -1.08
Casc4-201ENSMUST00000078752 Fam229aB2KGE5 128 aa8.3□□□□□ -1.08
Casc4-201ENSMUST00000078752 Gm19426M0QWC7 77 aa8.27□□□□□ -1.08
Casc4-201ENSMUST00000078752 2310079G19RikQ9D6L6 185 aa8.26□□□□□ -1.09
Casc4-201ENSMUST00000078752 Xirp2Q4U4S6 3784 aa8.18□□□□□ -1.1
Casc4-201ENSMUST00000078752 Ank2Q8C8R3 3898 aa8.16□□□□□ -1.1
Casc4-201ENSMUST00000078752 Spink7Q6IE32 76 aa8.15□□□□□ -1.11
Casc4-201ENSMUST00000078752 Tnp2P11378 117 aa8.11□□□□□ -1.11
Casc4-201ENSMUST00000078752 Gm5965D3Z724 196 aa8.1□□□□□ -1.11
Casc4-201ENSMUST00000078752 Gm21887J3QQ04 176 aa8.1□□□□□ -1.11
Casc4-201ENSMUST00000078752 Hspg2Q05793 3707 aaKnown RBP7.99□□□□□ -1.13
Casc4-201ENSMUST00000078752 Gm5767A0A0J9YTU8 78 aa7.98□□□□□ -1.13
Casc4-201ENSMUST00000078752 Csmd3Q80T79 3707 aa7.98□□□□□ -1.13
Casc4-201ENSMUST00000078752 A930033H14RikG5E8X6 103 aa7.97□□□□□ -1.13
Casc4-201ENSMUST00000078752 Camk2n1Q6QWF9 78 aa7.95□□□□□ -1.14
Casc4-201ENSMUST00000078752 Sec61bQ9CQS8 96 aaKnown RBP7.95□□□□□ -1.14
Casc4-201ENSMUST00000078752 2310057N15RikQ9D6T8 200 aa7.95□□□□□ -1.14
Casc4-201ENSMUST00000078752 BC029722A0A0N4SW31 51 aa7.93□□□□□ -1.14
Casc4-201ENSMUST00000078752 BsnO88737 3942 aa7.79□□□□□ -1.16
Casc4-201ENSMUST00000078752 B930094E09RikQ8C4T2 136 aa7.72□□□□□ -1.17
Casc4-201ENSMUST00000078752 Gm40193A0A1B0GT39 78 aa7.7□□□□□ -1.18
Casc4-201ENSMUST00000078752 Rps29P62274 56 aa7.63□□□□□ -1.19
Casc4-201ENSMUST00000078752 Krtap3-2Q9D638 99 aa7.62□□□□□ -1.19
Casc4-201ENSMUST00000078752 Krtap3-3Q9D7P0 99 aa7.62□□□□□ -1.19
Casc4-201ENSMUST00000078752 Gm9736A0A1W2P7N1 277 aa7.61□□□□□ -1.19
Casc4-201ENSMUST00000078752 Dnah14A0A140LIJ4 4489 aa7.58□□□□□ -1.2
Casc4-201ENSMUST00000078752 Gm9918Q8BUR5 174 aa7.54□□□□□ -1.2
Casc4-201ENSMUST00000078752 Dnah7bL7N1Y0 4068 aa7.51□□□□□ -1.21
Casc4-201ENSMUST00000078752 Dnah10D3YYQ8 4591 aa7.45□□□□□ -1.22
Casc4-201ENSMUST00000078752 Gm11939A2A592 99 aa7.43□□□□□ -1.22
Casc4-201ENSMUST00000078752 Dnah11E9Q7N9 4488 aa7.41□□□□□ -1.22
Casc4-201ENSMUST00000078752 Tnp1P10856 55 aa7.34□□□□□ -1.24
Casc4-201ENSMUST00000078752 Gm10318A0A1W2P728 225 aa7.3□□□□□ -1.24
Casc4-201ENSMUST00000078752 Krtap7-1Q9D3I6 87 aa7.29□□□□□ -1.24
Casc4-201ENSMUST00000078752 Gm19668J3QMD1 248 aa7.28□□□□□ -1.24
Casc4-201ENSMUST00000078752 Dnah17Q69Z23 4481 aa7.19□□□□□ -1.26
Casc4-201ENSMUST00000078752 2210017I01RikA0A0A6YVV1 95 aa7.17□□□□□ -1.26
Casc4-201ENSMUST00000078752 Krtap3-1A2A591 98 aa7.16□□□□□ -1.26
Casc4-201ENSMUST00000078752 Gm17416Q30KP4 66 aa7.16□□□□□ -1.26
Casc4-201ENSMUST00000078752 Huwe1Q7TMY8 4377 aaKnown RBP7.14□□□□□ -1.27
Casc4-201ENSMUST00000078752 Dnah9B1AR51 4484 aa7.14□□□□□ -1.27
Casc4-201ENSMUST00000078752 Dnah5Q8VHE6 4621 aa7.12□□□□□ -1.27
Casc4-201ENSMUST00000078752 Krtap13-1Q8K198 168 aa7.12□□□□□ -1.27
Casc4-201ENSMUST00000078752 Krtap19-5O08632 62 aa7.1□□□□□ -1.27
Casc4-201ENSMUST00000078752 Crct1Q6PAI5 102 aa7.09□□□□□ -1.28
Casc4-201ENSMUST00000078752 PlecQ9QXS1 4691 aaKnown RBP7.03□□□□□ -1.28
Casc4-201ENSMUST00000078752 Kmt2aP55200 3966 aa7.01□□□□□ -1.29
Casc4-201ENSMUST00000078752 Lrp1bQ9JI18 4599 aa7□□□□□ -1.29
Casc4-201ENSMUST00000078752 Gm17402F6Z0L5 76 aa7□□□□□ -1.29
Casc4-201ENSMUST00000078752 Hectd4E9Q2E4 4418 aa6.96□□□□□ -1.3
Casc4-201ENSMUST00000078752 Dnah3Q8BW94 4083 aa6.95□□□□□ -1.3
Casc4-201ENSMUST00000078752 Ryr1E9PZQ0 5035 aa6.92□□□□□ -1.3
Casc4-201ENSMUST00000078752 ApobE9Q414 4505 aa6.9□□□□□ -1.3
Casc4-201ENSMUST00000078752 Dnah6E9Q0B6 4144 aa6.86□□□□□ -1.31
Casc4-201ENSMUST00000078752 Gm19402J3QJV4 266 aa6.84□□□□□ -1.31
Casc4-201ENSMUST00000078752 Vps13bQ80TY5 3993 aa6.83□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 112 ms