RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Cfap54Q8C6S9 3106 aa3.38□□□□□ -1.87
Scn1a-201ENSMUST00000077489 Col12a1Q60847 3120 aa3.38□□□□□ -1.87
Scn1a-201ENSMUST00000077489 NipblQ6KCD5 2798 aaKnown RBP3.38□□□□□ -1.87
Scn1a-201ENSMUST00000077489 ApcQ61315 2845 aa3.37□□□□□ -1.87
Scn1a-201ENSMUST00000077489 Myo15aQ9QZZ4 3511 aa3.37□□□□□ -1.87
Scn1a-201ENSMUST00000077489 FryE9Q8I9 3020 aa3.37□□□□□ -1.87
Scn1a-201ENSMUST00000077489 Dchs2A0A0A6YW72 3346 aa3.36□□□□□ -1.87
Scn1a-201ENSMUST00000077489 Dmxl2Q8BPN8 3032 aa3.36□□□□□ -1.87
Scn1a-201ENSMUST00000077489 Tex15F8VPN2 2785 aa3.36□□□□□ -1.87
Scn1a-201ENSMUST00000077489 Prune2Q52KR3 3084 aa3.36□□□□□ -1.87
Scn1a-201ENSMUST00000077489 Gm2696A0A1W2P709 240 aa3.36□□□□□ -1.87
Scn1a-201ENSMUST00000077489 FcgbpE9Q0B5 2583 aa3.34□□□□□ -1.88
Scn1a-201ENSMUST00000077489 Lama1P19137 3084 aa3.33□□□□□ -1.88
Scn1a-201ENSMUST00000077489 RelnQ60841 3461 aa3.32□□□□□ -1.88
Scn1a-201ENSMUST00000077489 Itpr2Q9Z329 2701 aa3.32□□□□□ -1.88
Scn1a-201ENSMUST00000077489 NbeaQ9EPN1 2936 aa3.31□□□□□ -1.88
Scn1a-201ENSMUST00000077489 Tenm3Q9WTS6 2715 aa3.31□□□□□ -1.88
Scn1a-201ENSMUST00000077489 2210017I01RikA0A0A6YVV1 95 aa3.31□□□□□ -1.88
Scn1a-201ENSMUST00000077489 Celsr1O35161 3034 aa3.31□□□□□ -1.88
Scn1a-201ENSMUST00000077489 Wdfy4E9Q2M9 3149 aa3.3□□□□□ -1.88
Scn1a-201ENSMUST00000077489 KalrnA2CG49 2964 aa3.3□□□□□ -1.88
Scn1a-201ENSMUST00000077489 AtmQ62388 3066 aa3.29□□□□□ -1.88
Scn1a-201ENSMUST00000077489 Col7a1Q63870 2944 aa3.29□□□□□ -1.88
Scn1a-201ENSMUST00000077489 A030003K21RikA0A1Y7VIM3 128 aa3.28□□□□□ -1.88
Scn1a-201ENSMUST00000077489 FlnaQ8BTM8 2647 aaKnown RBP3.28□□□□□ -1.88
Scn1a-201ENSMUST00000077489 MgaA2AWL7 3003 aaKnown RBP3.27□□□□□ -1.89
Scn1a-201ENSMUST00000077489 Muc2Q80Z19 2680 aa3.27□□□□□ -1.89
Scn1a-201ENSMUST00000077489 Zzef1Q5SSH7 2924 aa3.26□□□□□ -1.89
Scn1a-201ENSMUST00000077489 Muc5acE9QAQ8 3455 aa3.26□□□□□ -1.89
Scn1a-201ENSMUST00000077489 LystP97412 3788 aa3.24□□□□□ -1.89
Scn1a-201ENSMUST00000077489 FrylF8VQ05 3007 aa3.24□□□□□ -1.89
Scn1a-201ENSMUST00000077489 Frem2Q6NVD0 3160 aa3.24□□□□□ -1.89
Scn1a-201ENSMUST00000077489 Bod1lE9Q6J5 3032 aa3.22□□□□□ -1.89
Scn1a-201ENSMUST00000077489 Igfn1Q3KNY0 2849 aa3.21□□□□□ -1.9
Scn1a-201ENSMUST00000077489 Helz2E9QAM5 2947 aaKnown RBP3.21□□□□□ -1.9
Scn1a-201ENSMUST00000077489 TgO08710 2766 aa3.2□□□□□ -1.9
Scn1a-201ENSMUST00000077489 FlnbQ80X90 2602 aaKnown RBP3.2□□□□□ -1.9
Scn1a-201ENSMUST00000077489 Vps13cQ8BX70 3748 aa3.19□□□□□ -1.9
Scn1a-201ENSMUST00000077489 4933428G20RikQ9D3X4 101 aa3.19□□□□□ -1.9
Scn1a-201ENSMUST00000077489 Trank1Q8BV79 2999 aa3.17□□□□□ -1.9
Scn1a-201ENSMUST00000077489 Gm19668J3QMD1 248 aa3.17□□□□□ -1.9
Scn1a-201ENSMUST00000077489 Dchs1E9PVD3 3291 aa3.15□□□□□ -1.9
Scn1a-201ENSMUST00000077489 FlncQ8VHX6 2726 aaKnown RBP3.14□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Tenm1Q9WTS4 2731 aa3.14□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Ash1lQ99MY8 2958 aa3.13□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Akap9Q70FJ1 3797 aa3.12□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Gm884A2A9H6 3643 aa3.12□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Csmd1Q923L3 3564 aa3.11□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Gm11939A2A592 99 aa3.1□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Gm9736A0A1W2P7N1 277 aa3.09□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Ranbp2Q9ERU9 3053 aaKnown RBP3.09□□□□□ -1.91
Scn1a-201ENSMUST00000077489 Nf1Q04690 2841 aa3.09□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Celsr3Q91ZI0 3301 aa3.08□□□□□ -1.92
Scn1a-201ENSMUST00000077489 LrbaQ9ESE1 2856 aa3.07□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Lama5Q61001 3718 aa3.06□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Gm6217A0A1Y7VJK9 128 aa3.05□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Muc4Q8JZM8 3443 aa3.05□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Pdzd2E9Q1M1 2796 aa3.04□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Krtap3-1A2A591 98 aa3.04□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Krtap13-1Q8K198 168 aa3.04□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Smg1Q8BKX6 3658 aaKnown RBP3.04□□□□□ -1.92
Scn1a-201ENSMUST00000077489 Krtap3-2Q9D638 99 aa3.02□□□□□ -1.93
Scn1a-201ENSMUST00000077489 Krtap3-3Q9D7P0 99 aa3.02□□□□□ -1.93
Scn1a-201ENSMUST00000077489 Ank2Q8C8R3 3898 aa3.02□□□□□ -1.93
Scn1a-201ENSMUST00000077489 Krtap19-5O08632 62 aa3.01□□□□□ -1.93
Scn1a-201ENSMUST00000077489 Cmya5Q70KF4 3739 aa3.01□□□□□ -1.93
Scn1a-201ENSMUST00000077489 Adgrg4B7ZCC9 3073 aa2.98□□□□□ -1.93
Scn1a-201ENSMUST00000077489 Megf8P60882 2789 aa2.95□□□□□ -1.94
Scn1a-201ENSMUST00000077489 Fbn2Q61555 2907 aa2.95□□□□□ -1.94
Scn1a-201ENSMUST00000077489 Huwe1Q7TMY8 4377 aaKnown RBP2.95□□□□□ -1.94
Scn1a-201ENSMUST00000077489 Gm9918Q8BUR5 174 aa2.93□□□□□ -1.94
Scn1a-201ENSMUST00000077489 Celsr2Q9R0M0 2920 aa2.9□□□□□ -1.95
Scn1a-201ENSMUST00000077489 Krtap28-10A0A1Y7VP58 119 aa2.9□□□□□ -1.95
Scn1a-201ENSMUST00000077489 Krtap1-5A2A590 122 aa2.9□□□□□ -1.95
Scn1a-201ENSMUST00000077489 A0A1Y7VJH8 109 aa2.87□□□□□ -1.95
Scn1a-201ENSMUST00000077489 Tenm2Q9WTS5 2764 aa2.87□□□□□ -1.95
Scn1a-201ENSMUST00000077489 Sprr2a3Q4KL71 83 aa2.87□□□□□ -1.95
Scn1a-201ENSMUST00000077489 Sprr2a1Q9CQK8 83 aa2.87□□□□□ -1.95
Scn1a-201ENSMUST00000077489 CubnQ9JLB4 3623 aa2.84□□□□□ -1.95
Scn1a-201ENSMUST00000077489 Svep1A2AVA0 3567 aa2.83□□□□□ -1.96
Scn1a-201ENSMUST00000077489 Gm10318A0A1W2P728 225 aa2.82□□□□□ -1.96
Scn1a-201ENSMUST00000077489 Krtap19-9aF8WH65 55 aa2.81□□□□□ -1.96
Scn1a-201ENSMUST00000077489 OtogO55225 2910 aa2.81□□□□□ -1.96
Scn1a-201ENSMUST00000077489 Tenm4Q3UHK6 2771 aa2.81□□□□□ -1.96
Scn1a-201ENSMUST00000077489 BsnO88737 3942 aa2.81□□□□□ -1.96
Scn1a-201ENSMUST00000077489 Hspg2Q05793 3707 aaKnown RBP2.81□□□□□ -1.96
Scn1a-201ENSMUST00000077489 Krtap28-13A0A087WQP5 138 aa2.8□□□□□ -1.96
Scn1a-201ENSMUST00000077489 Crct1Q6PAI5 102 aa2.8□□□□□ -1.96
Scn1a-201ENSMUST00000077489 A0A1Y7VJ07 166 aa2.79□□□□□ -1.96
Scn1a-201ENSMUST00000077489 Krtap7-1Q9D3I6 87 aa2.76□□□□□ -1.97
Scn1a-201ENSMUST00000077489 Krtap19-9bQ99NG9 58 aa2.75□□□□□ -1.97
Scn1a-201ENSMUST00000077489 Krtap1-4Q3V2D6 188 aa2.75□□□□□ -1.97
Scn1a-201ENSMUST00000077489 Ryr1E9PZQ0 5035 aa2.75□□□□□ -1.97
Scn1a-201ENSMUST00000077489 Gm7544A0A1Y7VJ58 118 aa2.74□□□□□ -1.97
Scn1a-201ENSMUST00000077489 VwfQ8CIZ8 2813 aa2.74□□□□□ -1.97
Scn1a-201ENSMUST00000077489 A030005K14RikA0A1Y7VNY1 122 aa2.74□□□□□ -1.97
Scn1a-201ENSMUST00000077489 TnxbO35452 4006 aa2.74□□□□□ -1.97
Scn1a-201ENSMUST00000077489 A030005L19RikA0A1Y7VIU2 113 aa2.73□□□□□ -1.97
Scn1a-201ENSMUST00000077489 Krtap8-1O08633 61 aa2.73□□□□□ -1.97
Scn1a-201ENSMUST00000077489 Xirp2Q4U4S6 3784 aa2.71□□□□□ -1.98
Retrieved 100 of 22,080 RNA–protein pairs in 115.2 ms