RNA–Protein interactions for RNA: ENSMUST00000072551.6

Clrn1-203, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 1,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-203ENSMUST00000072551 Smim20D3Z7Q2 69 aa6.54□□□□□ -1.36
Clrn1-203ENSMUST00000072551 Gm28230A0A0A0MQ91 144 aa6.53□□□□□ -1.36
Clrn1-203ENSMUST00000072551 Sfta2E9PXB6 77 aa6.53□□□□□ -1.36
Clrn1-203ENSMUST00000072551 Chchd10Q7TNL9 138 aa6.52□□□□□ -1.37
Clrn1-203ENSMUST00000072551 Gm18596A0A1W2P860 280 aa6.51□□□□□ -1.37
Clrn1-203ENSMUST00000072551 SmcpP15265 143 aa6.49□□□□□ -1.37
Clrn1-203ENSMUST00000072551 Gm16253D3Z167 63 aa6.49□□□□□ -1.37
Clrn1-203ENSMUST00000072551 Igkv3-4A0A140T8Q4 119 aa6.47□□□□□ -1.37
Clrn1-203ENSMUST00000072551 Gm17689B3GLJ4 109 aa6.47□□□□□ -1.37
Clrn1-203ENSMUST00000072551 Gm21886J3QJU9 214 aa6.46□□□□□ -1.37
Clrn1-203ENSMUST00000072551 Sprr2jO70561 109 aa6.46□□□□□ -1.37
Clrn1-203ENSMUST00000072551 Rbm3O89086 153 aaKnown RBP6.46□□□□□ -1.37
Clrn1-203ENSMUST00000072551 Gm2310J3QNJ2 377 aa6.45□□□□□ -1.38
Clrn1-203ENSMUST00000072551 Tmem213Q08EA8 116 aa6.45□□□□□ -1.38
Clrn1-203ENSMUST00000072551 A0A1Y7VLE6 161 aa6.45□□□□□ -1.38
Clrn1-203ENSMUST00000072551 Gm12353A2AGJ4 60 aa6.45□□□□□ -1.38
Clrn1-203ENSMUST00000072551 Gm44790A0A0N4SV91 103 aa6.44□□□□□ -1.38
Clrn1-203ENSMUST00000072551 BatfO35284 125 aa6.44□□□□□ -1.38
Clrn1-203ENSMUST00000072551 Dph3Q8K0W9 82 aa6.44□□□□□ -1.38
Clrn1-203ENSMUST00000072551 4930535I16RikQ9CUI2 172 aa6.44□□□□□ -1.38
Clrn1-203ENSMUST00000072551 Samd13D3YUG0 102 aa6.43□□□□□ -1.38
Clrn1-203ENSMUST00000072551 Gm5965D3Z724 196 aa6.42□□□□□ -1.38
Clrn1-203ENSMUST00000072551 Rps29P62274 56 aa6.39□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Gm37013Q8K491 104 aa6.39□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Gm10337F7DEP7 55 aa6.39□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Xcl1P47993 114 aa6.39□□□□□ -1.39
Clrn1-203ENSMUST00000072551 C130032M10RikQ8C888 123 aa6.39□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Trav14d-3-dv8A0A075B619 120 aa6.38□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Mrpl34Q99N91 92 aa6.38□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Pde6gP09174 87 aa6.37□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Lyrm7Q9DA03 104 aa6.37□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Krtap28-13A0A087WQP5 138 aa6.36□□□□□ -1.39
Clrn1-203ENSMUST00000072551 H2al1aQ5M8Q2 105 aa6.36□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Atp5eP56382 52 aa6.36□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Igkv8-21A0A140T8P7 120 aa6.35□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Anapc13Q8R034 74 aa6.35□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Ormdl1Q921I0 153 aa6.35□□□□□ -1.39
Clrn1-203ENSMUST00000072551 UqcrqQ9CQ69 82 aa6.35□□□□□ -1.39
Clrn1-203ENSMUST00000072551 Ush2AQ2QI47 5193 aa6.34□□□□□ -1.39
Clrn1-203ENSMUST00000072551 H2al1bA0A087WP11 105 aa6.32□□□□□ -1.4
Clrn1-203ENSMUST00000072551 A930033H14RikG5E8X6 103 aa6.32□□□□□ -1.4
Clrn1-203ENSMUST00000072551 H2al1kJ3QP08 105 aa6.32□□□□□ -1.4
Clrn1-203ENSMUST00000072551 H2al1eQ810S6 105 aa6.32□□□□□ -1.4
Clrn1-203ENSMUST00000072551 H2al1mQ9DAD9 105 aa6.32□□□□□ -1.4
Clrn1-203ENSMUST00000072551 Reg3aO09037 175 aa6.3□□□□□ -1.4
Clrn1-203ENSMUST00000072551 Rps28P62858 69 aaKnown RBP6.29□□□□□ -1.4
Clrn1-203ENSMUST00000072551 MplkipQ9D011 178 aa6.29□□□□□ -1.4
Clrn1-203ENSMUST00000072551 Cypt15B1AXS0 87 aa6.28□□□□□ -1.4
Clrn1-203ENSMUST00000072551 Defa21Q8C1P2 93 aa6.27□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Gm5767A0A0J9YTU8 78 aa6.26□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Cystm1Q8K353 104 aa6.26□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Hmcn2A2AJ76 5100 aa6.25□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Prm1P02319 51 aa6.24□□□□□ -1.41
Clrn1-203ENSMUST00000072551 GhrhP16043 103 aa6.24□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Gm9789Q8BIG3 52 aa6.23□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Gm7735D3YX18 52 aa6.23□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Gm10160F6Y577 67 aa6.23□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Ubl5Q9EPV8 73 aa6.22□□□□□ -1.41
Clrn1-203ENSMUST00000072551 Igkv8-19A0A0G2JFN8 121 aa6.2□□□□□ -1.42
Clrn1-203ENSMUST00000072551 Hist1h4aP62806 103 aaKnown RBP6.2□□□□□ -1.42
Clrn1-203ENSMUST00000072551 Ubr4A2AN08 5180 aa6.19□□□□□ -1.42
Clrn1-203ENSMUST00000072551 A030005K14RikA0A1Y7VNY1 122 aa6.19□□□□□ -1.42
Clrn1-203ENSMUST00000072551 Gm26620Q9CY65 116 aa6.17□□□□□ -1.42
Clrn1-203ENSMUST00000072551 Krtap15-1Q9QZU5 150 aa6.16□□□□□ -1.42
Clrn1-203ENSMUST00000072551 Gm38119A0A0A6YX29 146 aa6.15□□□□□ -1.42
Clrn1-203ENSMUST00000072551 Igkv3-3A0A140T8Q0 119 aa6.15□□□□□ -1.42
Clrn1-203ENSMUST00000072551 Gm19668J3QMD1 248 aa6.14□□□□□ -1.43
Clrn1-203ENSMUST00000072551 Gm10267M0QWD8 85 aa6.13□□□□□ -1.43
Clrn1-203ENSMUST00000072551 Apoc4Q61268 124 aa6.13□□□□□ -1.43
Clrn1-203ENSMUST00000072551 Prr15lQ8JZM2 100 aa6.12□□□□□ -1.43
Clrn1-203ENSMUST00000072551 4932415D10RikA0A1W2P6U8 4986 aa6.12□□□□□ -1.43
Clrn1-203ENSMUST00000072551 Tmem254aP0DN89 123 aa6.11□□□□□ -1.43
Clrn1-203ENSMUST00000072551 Tmem254bP0DN90 123 aa6.11□□□□□ -1.43
Clrn1-203ENSMUST00000072551 Tmem254cP0DN91 123 aa6.11□□□□□ -1.43
Clrn1-203ENSMUST00000072551 Gm9821Q8K076 103 aa6.1□□□□□ -1.43
Clrn1-203ENSMUST00000072551 Gm19935A0A1B0GSF9 52 aa6.09□□□□□ -1.43
Clrn1-203ENSMUST00000072551 A030005L19RikA0A1Y7VIU2 113 aa6.09□□□□□ -1.43
Clrn1-203ENSMUST00000072551 7530416G11RikJ3QJX6 159 aa6.08□□□□□ -1.44
Clrn1-203ENSMUST00000072551 2310057N15RikQ9D6T8 200 aa6.08□□□□□ -1.44
Clrn1-203ENSMUST00000072551 Fam229bQ8CF36 80 aa6.07□□□□□ -1.44
Clrn1-203ENSMUST00000072551 Defb13Q8R2I4 64 aa6.07□□□□□ -1.44
Clrn1-203ENSMUST00000072551 Rpl37Q9D823 97 aa6.05□□□□□ -1.44
Clrn1-203ENSMUST00000072551 BikO70337 150 aa6.04□□□□□ -1.44
Clrn1-203ENSMUST00000072551 Serp2Q6TAW2 65 aa6.04□□□□□ -1.44
Clrn1-203ENSMUST00000072551 2310034C09RikQ9D746 214 aa6.02□□□□□ -1.45
Clrn1-203ENSMUST00000072551 Spink8Q09TK9 105 aa6.01□□□□□ -1.45
Clrn1-203ENSMUST00000072551 A0A286YE49 62 aa6□□□□□ -1.45
Clrn1-203ENSMUST00000072551 Krtap1-3A2A588 173 aa5.99□□□□□ -1.45
Clrn1-203ENSMUST00000072551 4930518I15RikQ3V2W7 57 aa5.99□□□□□ -1.45
Clrn1-203ENSMUST00000072551 Crct1Q6PAI5 102 aa5.99□□□□□ -1.45
Clrn1-203ENSMUST00000072551 Sec61bQ9CQS8 96 aaKnown RBP5.98□□□□□ -1.45
Clrn1-203ENSMUST00000072551 Ndufc1Q9CQY9 76 aa5.98□□□□□ -1.45
Clrn1-203ENSMUST00000072551 ZanO88799 5376 aa5.94□□□□□ -1.46
Clrn1-203ENSMUST00000072551 Tmem258P61166 79 aa5.94□□□□□ -1.46
Clrn1-203ENSMUST00000072551 Naa38Q9D2U5 125 aa5.91□□□□□ -1.46
Clrn1-203ENSMUST00000072551 1700074P13RikQ9D9G7 251 aa5.91□□□□□ -1.46
Clrn1-203ENSMUST00000072551 Krtap16-3Q8C1I6 86 aa5.88□□□□□ -1.47
Clrn1-203ENSMUST00000072551 Pet100P0DJE0 76 aa5.88□□□□□ -1.47
Clrn1-203ENSMUST00000072551 Rnase13Q5GAM7 153 aa5.88□□□□□ -1.47
Clrn1-203ENSMUST00000072551 Gm4491E0CX42 125 aa5.87□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms