RNA–Protein interactions for RNA: ENSMUST00000064190.12

Rai1-201, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,348 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-201ENSMUST00000064190 D6Ertd527eA0A0N4SWI3 464 aa8,83□□□□□ -1
Rai1-201ENSMUST00000064190 Adgrg4B7ZCC9 3073 aa8,8□□□□□ -1
Rai1-201ENSMUST00000064190 Pkd1l1Q8R526 2615 aa8,79□□□□□ -1
Rai1-201ENSMUST00000064190 Igfn1Q3KNY0 2849 aa8,79□□□□□ -1
Rai1-201ENSMUST00000064190 Stab2Q8R4U0 2559 aa8,77□□□□□ -1,01
Rai1-201ENSMUST00000064190 Itpr2Q9Z329 2701 aa8,77□□□□□ -1,01
Rai1-201ENSMUST00000064190 DspE9Q557 2883 aaKnown RBP8,75□□□□□ -1,01
Rai1-201ENSMUST00000064190 ApcQ61315 2845 aa8,73□□□□□ -1,01
Rai1-201ENSMUST00000064190 Rps29P62274 56 aa8,73□□□□□ -1,01
Rai1-201ENSMUST00000064190 2310061N02RikQ9D6S9 174 aa8,71□□□□□ -1,02
Rai1-201ENSMUST00000064190 Wdfy3Q6VNB8 3508 aa8,69□□□□□ -1,02
Rai1-201ENSMUST00000064190 Utp20Q5XG71 2788 aaKnown RBP8,68□□□□□ -1,02
Rai1-201ENSMUST00000064190 Muc2Q80Z19 2680 aa8,68□□□□□ -1,02
Rai1-201ENSMUST00000064190 Gm9918Q8BUR5 174 aa8,67□□□□□ -1,02
Rai1-201ENSMUST00000064190 Gm40193A0A1B0GT39 78 aa8,65□□□□□ -1,03
Rai1-201ENSMUST00000064190 NbeaQ9EPN1 2936 aa8,62□□□□□ -1,03
Rai1-201ENSMUST00000064190 SmcpP15265 143 aa8,58□□□□□ -1,04
Rai1-201ENSMUST00000064190 Trank1Q8BV79 2999 aa8,54□□□□□ -1,04
Rai1-201ENSMUST00000064190 Akap9Q70FJ1 3797 aa8,51□□□□□ -1,05
Rai1-201ENSMUST00000064190 Gm20537G3UYK7 97 aa8,51□□□□□ -1,05
Rai1-201ENSMUST00000064190 Prm2P07978 107 aa8,45□□□□□ -1,06
Rai1-201ENSMUST00000064190 B930094E09RikQ8C4T2 136 aa8,45□□□□□ -1,06
Rai1-201ENSMUST00000064190 Zzef1Q5SSH7 2924 aa8,44□□□□□ -1,06
Rai1-201ENSMUST00000064190 Srrm2Q8BTI8 2703 aaKnown RBP8,44□□□□□ -1,06
Rai1-201ENSMUST00000064190 Hivep1Q03172 2688 aa8,43□□□□□ -1,06
Rai1-201ENSMUST00000064190 FlncQ8VHX6 2726 aaKnown RBP8,41□□□□□ -1,06
Rai1-201ENSMUST00000064190 Tex15F8VPN2 2785 aa8,41□□□□□ -1,06
Rai1-201ENSMUST00000064190 Chd9Q8BYH8 2885 aa8,4□□□□□ -1,06
Rai1-201ENSMUST00000064190 DmdP11531 3678 aa8,4□□□□□ -1,07
Rai1-201ENSMUST00000064190 Vps13cQ8BX70 3748 aa8,38□□□□□ -1,07
Rai1-201ENSMUST00000064190 Tenm4Q3UHK6 2771 aa8,34□□□□□ -1,07
Rai1-201ENSMUST00000064190 A930033H14RikG5E8X6 103 aa8,33□□□□□ -1,08
Rai1-201ENSMUST00000064190 RelnQ60841 3461 aa8,32□□□□□ -1,08
Rai1-201ENSMUST00000064190 LrbaQ9ESE1 2856 aa8,32□□□□□ -1,08
Rai1-201ENSMUST00000064190 FcgbpE9Q0B5 2583 aa8,29□□□□□ -1,08
Rai1-201ENSMUST00000064190 Celsr2Q9R0M0 2920 aa8,29□□□□□ -1,08
Rai1-201ENSMUST00000064190 4933428G20RikQ9D3X4 101 aa8,26□□□□□ -1,09
Rai1-201ENSMUST00000064190 Smg1Q8BKX6 3658 aaKnown RBP8,26□□□□□ -1,09
Rai1-201ENSMUST00000064190 Csmd1Q923L3 3564 aa8,24□□□□□ -1,09
Rai1-201ENSMUST00000064190 Muc5acE9QAQ8 3455 aa8,24□□□□□ -1,09
Rai1-201ENSMUST00000064190 Nf1Q04690 2841 aa8,16□□□□□ -1,1
Rai1-201ENSMUST00000064190 TgO08710 2766 aa8,15□□□□□ -1,11
Rai1-201ENSMUST00000064190 Gm10318A0A1W2P728 225 aa8,13□□□□□ -1,11
Rai1-201ENSMUST00000064190 Tenm1Q9WTS4 2731 aa8,12□□□□□ -1,11
Rai1-201ENSMUST00000064190 Zfhx4Q9JJN2 3550 aa8,12□□□□□ -1,11
Rai1-201ENSMUST00000064190 Gm9736A0A1W2P7N1 277 aa8,11□□□□□ -1,11
Rai1-201ENSMUST00000064190 Pdzd2E9Q1M1 2796 aa8,06□□□□□ -1,12
Rai1-201ENSMUST00000064190 OtogO55225 2910 aa8,02□□□□□ -1,13
Rai1-201ENSMUST00000064190 Lama5Q61001 3718 aa7,96□□□□□ -1,14
Rai1-201ENSMUST00000064190 Cmya5Q70KF4 3739 aa7,93□□□□□ -1,14
Rai1-201ENSMUST00000064190 SpenQ62504 3644 aaKnown RBP7,89□□□□□ -1,15
Rai1-201ENSMUST00000064190 Csmd2V9GX34 3611 aa7,88□□□□□ -1,15
Rai1-201ENSMUST00000064190 2310079G19RikQ9D6L6 185 aa7,87□□□□□ -1,15
Rai1-201ENSMUST00000064190 Gm19668J3QMD1 248 aa7,83□□□□□ -1,16
Rai1-201ENSMUST00000064190 Tenm2Q9WTS5 2764 aa7,83□□□□□ -1,16
Rai1-201ENSMUST00000064190 Crct1Q6PAI5 102 aa7,78□□□□□ -1,16
Rai1-201ENSMUST00000064190 VwfQ8CIZ8 2813 aa7,74□□□□□ -1,17
Rai1-201ENSMUST00000064190 Gm6358A0A087WPH4 74 aa7,71□□□□□ -1,18
Rai1-201ENSMUST00000064190 Gm17416Q30KP4 66 aa7,69□□□□□ -1,18
Rai1-201ENSMUST00000064190 Col7a1Q63870 2944 aa7,69□□□□□ -1,18
Rai1-201ENSMUST00000064190 Gm17402F6Z0L5 76 aa7,67□□□□□ -1,18
Rai1-201ENSMUST00000064190 Tenm3Q9WTS6 2715 aa7,67□□□□□ -1,18
Rai1-201ENSMUST00000064190 2210017I01RikA0A0A6YVV1 95 aa7,66□□□□□ -1,18
Rai1-201ENSMUST00000064190 Gm884A2A9H6 3643 aa7,66□□□□□ -1,18
Rai1-201ENSMUST00000064190 Megf8P60882 2789 aa7,64□□□□□ -1,19
Rai1-201ENSMUST00000064190 Helz2E9QAM5 2947 aaKnown RBP7,63□□□□□ -1,19
Rai1-201ENSMUST00000064190 Svep1A2AVA0 3567 aa7,57□□□□□ -1,2
Rai1-201ENSMUST00000064190 Muc4Q8JZM8 3443 aa7,53□□□□□ -1,2
Rai1-201ENSMUST00000064190 Krtap13-1Q8K198 168 aa7,41□□□□□ -1,22
Rai1-201ENSMUST00000064190 CubnQ9JLB4 3623 aa7,27□□□□□ -1,25
Rai1-201ENSMUST00000064190 Sprr2kO70562 68 aa7,25□□□□□ -1,25
Rai1-201ENSMUST00000064190 LystP97412 3788 aa7,24□□□□□ -1,25
Rai1-201ENSMUST00000064190 Gm18596A0A1W2P860 280 aa7,23□□□□□ -1,25
Rai1-201ENSMUST00000064190 Krtap19-5O08632 62 aa7,22□□□□□ -1,25
Rai1-201ENSMUST00000064190 Ank2Q8C8R3 3898 aa7,21□□□□□ -1,26
Rai1-201ENSMUST00000064190 Gm11939A2A592 99 aa7,2□□□□□ -1,26
Rai1-201ENSMUST00000064190 Fbn1Q61554 2873 aaKnown RBP7,14□□□□□ -1,27
Rai1-201ENSMUST00000064190 Krtap7-1Q9D3I6 87 aa7,07□□□□□ -1,28
Rai1-201ENSMUST00000064190 Krtap3-1A2A591 98 aa7,07□□□□□ -1,28
Rai1-201ENSMUST00000064190 Csmd3Q80T79 3707 aa7,06□□□□□ -1,28
Rai1-201ENSMUST00000064190 Gm19402J3QJV4 266 aa7,05□□□□□ -1,28
Rai1-201ENSMUST00000064190 Muc6Q80T03 2850 aa7,03□□□□□ -1,28
Rai1-201ENSMUST00000064190 Krtap8-1O08633 61 aa7,03□□□□□ -1,28
Rai1-201ENSMUST00000064190 Hspg2Q05793 3707 aaKnown RBP6,97□□□□□ -1,29
Rai1-201ENSMUST00000064190 BsnO88737 3942 aa6,84□□□□□ -1,32
Rai1-201ENSMUST00000064190 Krtap3-2Q9D638 99 aa6,83□□□□□ -1,32
Rai1-201ENSMUST00000064190 Krtap3-3Q9D7P0 99 aa6,83□□□□□ -1,32
Rai1-201ENSMUST00000064190 Sprr2gO70558 76 aa6,82□□□□□ -1,32
Rai1-201ENSMUST00000064190 Krtap19-9aF8WH65 55 aa6,76□□□□□ -1,33
Rai1-201ENSMUST00000064190 Huwe1Q7TMY8 4377 aaKnown RBP6,75□□□□□ -1,33
Rai1-201ENSMUST00000064190 Xirp2Q4U4S6 3784 aa6,7□□□□□ -1,34
Rai1-201ENSMUST00000064190 LorP18165 486 aa6,63□□□□□ -1,35
Rai1-201ENSMUST00000064190 Krtap12-1Q9Z287 130 aa6,61□□□□□ -1,35
Rai1-201ENSMUST00000064190 Krtap19-9bQ99NG9 58 aa6,57□□□□□ -1,36
Rai1-201ENSMUST00000064190 Sprr2a3Q4KL71 83 aa6,56□□□□□ -1,36
Rai1-201ENSMUST00000064190 Sprr2a1Q9CQK8 83 aa6,56□□□□□ -1,36
Rai1-201ENSMUST00000064190 Krtap1-5A2A590 122 aa6,54□□□□□ -1,36
Rai1-201ENSMUST00000064190 Dnah14A0A140LIJ4 4489 aa6,49□□□□□ -1,37
Rai1-201ENSMUST00000064190 Krtap1-4Q3V2D6 188 aa6,46□□□□□ -1,38
Rai1-201ENSMUST00000064190 Lce3bQ9CQM7 98 aa6,38□□□□□ -1,39
Retrieved 100 of 22,080 RNA–protein pairs in 36,9 ms