RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Pkd1l1Q8R526 2615 aa6.23□□□□□ -1.41
Gtf3c1-201ENSMUST00000055506 D6Ertd527eA0A0N4SWI3 464 aa6.22□□□□□ -1.41
Gtf3c1-201ENSMUST00000055506 LrbaQ9ESE1 2856 aa6.21□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Prm2P07978 107 aa6.21□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Trank1Q8BV79 2999 aa6.21□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Tex15F8VPN2 2785 aa6.19□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Itpr1P11881 2749 aa6.17□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Csmd1Q923L3 3564 aa6.16□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Srrm2Q8BTI8 2703 aaKnown RBP6.15□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Gm2696A0A1W2P709 240 aa6.14□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Igfn1Q3KNY0 2849 aa6.11□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Col6a5A6H584 2640 aa6.11□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Tnp1P10856 55 aa6.09□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Gm5965D3Z724 196 aa6.09□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 2310057N15RikQ9D6T8 200 aa6.09□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Gm11565A2A4M7 156 aa6.08□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Gm20537G3UYK7 97 aa6.08□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 NbeaQ9EPN1 2936 aa6.08□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Itpr2Q9Z329 2701 aa6.06□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 TgO08710 2766 aa6.06□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Celsr2Q9R0M0 2920 aa6.04□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Tnp2P11378 117 aa6.04□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 2310061N02RikQ9D6S9 174 aa6.03□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Akap9Q70FJ1 3797 aa6.03□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Chd9Q8BYH8 2885 aa6.02□□□□□ -1.45
Gtf3c1-201ENSMUST00000055506 RelnQ60841 3461 aa5.97□□□□□ -1.45
Gtf3c1-201ENSMUST00000055506 Muc2Q80Z19 2680 aa5.96□□□□□ -1.46
Gtf3c1-201ENSMUST00000055506 Gm40193A0A1B0GT39 78 aa5.91□□□□□ -1.46
Gtf3c1-201ENSMUST00000055506 FcgbpE9Q0B5 2583 aa5.91□□□□□ -1.46
Gtf3c1-201ENSMUST00000055506 Hivep1Q03172 2688 aa5.9□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Zfhx4Q9JJN2 3550 aa5.89□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Rps29P62274 56 aa5.88□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Muc5acE9QAQ8 3455 aa5.85□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 SpenQ62504 3644 aaKnown RBP5.85□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 B930094E09RikQ8C4T2 136 aa5.85□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Gm9918Q8BUR5 174 aa5.84□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Smg1Q8BKX6 3658 aaKnown RBP5.84□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Vps13cQ8BX70 3748 aa5.83□□□□□ -1.48
Gtf3c1-201ENSMUST00000055506 Helz2E9QAM5 2947 aaKnown RBP5.81□□□□□ -1.48
Gtf3c1-201ENSMUST00000055506 Nf1Q04690 2841 aa5.8□□□□□ -1.48
Gtf3c1-201ENSMUST00000055506 DmdP11531 3678 aa5.78□□□□□ -1.48
Gtf3c1-201ENSMUST00000055506 Pdzd2E9Q1M1 2796 aa5.75□□□□□ -1.49
Gtf3c1-201ENSMUST00000055506 FlncQ8VHX6 2726 aaKnown RBP5.73□□□□□ -1.49
Gtf3c1-201ENSMUST00000055506 Tenm1Q9WTS4 2731 aa5.72□□□□□ -1.49
Gtf3c1-201ENSMUST00000055506 Cmya5Q70KF4 3739 aa5.7□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 Gm10318A0A1W2P728 225 aa5.67□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 2310079G19RikQ9D6L6 185 aa5.66□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 Megf8P60882 2789 aa5.65□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 Gm9736A0A1W2P7N1 277 aa5.65□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 Tenm4Q3UHK6 2771 aa5.65□□□□□ -1.51
Gtf3c1-201ENSMUST00000055506 Tenm3Q9WTS6 2715 aa5.61□□□□□ -1.51
Gtf3c1-201ENSMUST00000055506 OtogO55225 2910 aa5.55□□□□□ -1.52
Gtf3c1-201ENSMUST00000055506 A930033H14RikG5E8X6 103 aa5.55□□□□□ -1.52
Gtf3c1-201ENSMUST00000055506 Lama5Q61001 3718 aa5.5□□□□□ -1.53
Gtf3c1-201ENSMUST00000055506 VwfQ8CIZ8 2813 aa5.49□□□□□ -1.53
Gtf3c1-201ENSMUST00000055506 Tenm2Q9WTS5 2764 aa5.46□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Svep1A2AVA0 3567 aa5.45□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Gm884A2A9H6 3643 aa5.44□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Csmd2V9GX34 3611 aa5.44□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Muc4Q8JZM8 3443 aa5.41□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Crct1Q6PAI5 102 aa5.37□□□□□ -1.55
Gtf3c1-201ENSMUST00000055506 Fbn1Q61554 2873 aaKnown RBP5.35□□□□□ -1.55
Gtf3c1-201ENSMUST00000055506 4933428G20RikQ9D3X4 101 aa5.31□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 2210017I01RikA0A0A6YVV1 95 aa5.31□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 Gm19668J3QMD1 248 aa5.31□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 Gm17416Q30KP4 66 aa5.3□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 LystP97412 3788 aa5.29□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 CubnQ9JLB4 3623 aa5.27□□□□□ -1.57
Gtf3c1-201ENSMUST00000055506 Gm17402F6Z0L5 76 aa5.25□□□□□ -1.57
Gtf3c1-201ENSMUST00000055506 Col7a1Q63870 2944 aa5.21□□□□□ -1.58
Gtf3c1-201ENSMUST00000055506 Csmd3Q80T79 3707 aa5.16□□□□□ -1.58
Gtf3c1-201ENSMUST00000055506 Krtap13-1Q8K198 168 aa5.16□□□□□ -1.58
Gtf3c1-201ENSMUST00000055506 Gm6358A0A087WPH4 74 aa5.11□□□□□ -1.59
Gtf3c1-201ENSMUST00000055506 Gm11939A2A592 99 aa5.1□□□□□ -1.59
Gtf3c1-201ENSMUST00000055506 Gm18596A0A1W2P860 280 aa5.03□□□□□ -1.6
Gtf3c1-201ENSMUST00000055506 Krtap3-1A2A591 98 aa5.01□□□□□ -1.61
Gtf3c1-201ENSMUST00000055506 Hspg2Q05793 3707 aaKnown RBP4.99□□□□□ -1.61
Gtf3c1-201ENSMUST00000055506 Ank2Q8C8R3 3898 aa4.99□□□□□ -1.61
Gtf3c1-201ENSMUST00000055506 Krtap3-2Q9D638 99 aa4.93□□□□□ -1.62
Gtf3c1-201ENSMUST00000055506 Krtap3-3Q9D7P0 99 aa4.93□□□□□ -1.62
Gtf3c1-201ENSMUST00000055506 Krtap19-5O08632 62 aa4.93□□□□□ -1.62
Gtf3c1-201ENSMUST00000055506 Muc6Q80T03 2850 aa4.85□□□□□ -1.63
Gtf3c1-201ENSMUST00000055506 Krtap7-1Q9D3I6 87 aa4.82□□□□□ -1.64
Gtf3c1-201ENSMUST00000055506 Huwe1Q7TMY8 4377 aaKnown RBP4.76□□□□□ -1.65
Gtf3c1-201ENSMUST00000055506 Xirp2Q4U4S6 3784 aa4.76□□□□□ -1.65
Gtf3c1-201ENSMUST00000055506 Sprr2kO70562 68 aa4.73□□□□□ -1.65
Gtf3c1-201ENSMUST00000055506 Gm19402J3QJV4 266 aa4.69□□□□□ -1.66
Gtf3c1-201ENSMUST00000055506 Sprr2a3Q4KL71 83 aa4.63□□□□□ -1.67
Gtf3c1-201ENSMUST00000055506 Sprr2a1Q9CQK8 83 aa4.63□□□□□ -1.67
Gtf3c1-201ENSMUST00000055506 BsnO88737 3942 aa4.6□□□□□ -1.67
Gtf3c1-201ENSMUST00000055506 Dnah10D3YYQ8 4591 aa4.59□□□□□ -1.67
Gtf3c1-201ENSMUST00000055506 Dnah14A0A140LIJ4 4489 aa4.59□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 LorP18165 486 aa4.59□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 Krtap8-1O08633 61 aa4.58□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 Krtap19-9aF8WH65 55 aa4.57□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 Krtap12-1Q9Z287 130 aa4.56□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 Krtap1-5A2A590 122 aa4.51□□□□□ -1.69
Gtf3c1-201ENSMUST00000055506 Krtap19-9bQ99NG9 58 aa4.49□□□□□ -1.69
Gtf3c1-201ENSMUST00000055506 Lce1mQ9CR91 182 aa4.49□□□□□ -1.69
Gtf3c1-201ENSMUST00000055506 Krtap1-4Q3V2D6 188 aa4.47□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms