RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Tenm4Q3UHK6 2771 aa9.94□□□□□ -0.82
Usp48-201ENSMUST00000055131 Zzef1Q5SSH7 2924 aa9.93□□□□□ -0.82
Usp48-201ENSMUST00000055131 Myo15aQ9QZZ4 3511 aa9.91□□□□□ -0.82
Usp48-201ENSMUST00000055131 Wdfy3Q6VNB8 3508 aa9.89□□□□□ -0.83
Usp48-201ENSMUST00000055131 SpegQ62407 3262 aa9.86□□□□□ -0.83
Usp48-201ENSMUST00000055131 FlncQ8VHX6 2726 aaKnown RBP9.85□□□□□ -0.83
Usp48-201ENSMUST00000055131 SmcpP15265 143 aa9.84□□□□□ -0.83
Usp48-201ENSMUST00000055131 Zfhx3Q61329 3726 aa9.79□□□□□ -0.84
Usp48-201ENSMUST00000055131 RelnQ60841 3461 aa9.78□□□□□ -0.84
Usp48-201ENSMUST00000055131 Gm2696A0A1W2P709 240 aa9.78□□□□□ -0.84
Usp48-201ENSMUST00000055131 Celsr2Q9R0M0 2920 aa9.77□□□□□ -0.84
Usp48-201ENSMUST00000055131 FcgbpE9Q0B5 2583 aa9.77□□□□□ -0.85
Usp48-201ENSMUST00000055131 Tnp2P11378 117 aa9.77□□□□□ -0.85
Usp48-201ENSMUST00000055131 Cox6b2Q80ZN9 88 aa9.75□□□□□ -0.85
Usp48-201ENSMUST00000055131 Rps29P62274 56 aa9.74□□□□□ -0.85
Usp48-201ENSMUST00000055131 Trank1Q8BV79 2999 aa9.73□□□□□ -0.85
Usp48-201ENSMUST00000055131 Chd9Q8BYH8 2885 aa9.72□□□□□ -0.85
Usp48-201ENSMUST00000055131 D6Ertd527eA0A0N4SWI3 464 aa9.64□□□□□ -0.87
Usp48-201ENSMUST00000055131 DmdP11531 3678 aa9.57□□□□□ -0.88
Usp48-201ENSMUST00000055131 Akap9Q70FJ1 3797 aa9.56□□□□□ -0.88
Usp48-201ENSMUST00000055131 Nf1Q04690 2841 aa9.56□□□□□ -0.88
Usp48-201ENSMUST00000055131 LrbaQ9ESE1 2856 aa9.55□□□□□ -0.88
Usp48-201ENSMUST00000055131 Vps13cQ8BX70 3748 aa9.55□□□□□ -0.88
Usp48-201ENSMUST00000055131 Tenm3Q9WTS6 2715 aa9.55□□□□□ -0.88
Usp48-201ENSMUST00000055131 Srrm2Q8BTI8 2703 aaKnown RBP9.52□□□□□ -0.89
Usp48-201ENSMUST00000055131 Pdzd2E9Q1M1 2796 aa9.5□□□□□ -0.89
Usp48-201ENSMUST00000055131 Muc5acE9QAQ8 3455 aa9.5□□□□□ -0.89
Usp48-201ENSMUST00000055131 Gm21887J3QQ04 176 aa9.46□□□□□ -0.89
Usp48-201ENSMUST00000055131 ApcQ61315 2845 aa9.46□□□□□ -0.89
Usp48-201ENSMUST00000055131 Gm5965D3Z724 196 aa9.43□□□□□ -0.9
Usp48-201ENSMUST00000055131 TgO08710 2766 aa9.43□□□□□ -0.9
Usp48-201ENSMUST00000055131 Ndufaf8A2AMZ4 74 aa9.43□□□□□ -0.9
Usp48-201ENSMUST00000055131 2310057N15RikQ9D6T8 200 aa9.38□□□□□ -0.91
Usp48-201ENSMUST00000055131 Lama5Q61001 3718 aa9.19□□□□□ -0.94
Usp48-201ENSMUST00000055131 Helz2E9QAM5 2947 aaKnown RBP9.19□□□□□ -0.94
Usp48-201ENSMUST00000055131 Tnp1P10856 55 aa9.17□□□□□ -0.94
Usp48-201ENSMUST00000055131 OtogO55225 2910 aa9.15□□□□□ -0.94
Usp48-201ENSMUST00000055131 Smg1Q8BKX6 3658 aaKnown RBP9.15□□□□□ -0.94
Usp48-201ENSMUST00000055131 Gm20537G3UYK7 97 aa9.15□□□□□ -0.94
Usp48-201ENSMUST00000055131 Tenm1Q9WTS4 2731 aa9.13□□□□□ -0.95
Usp48-201ENSMUST00000055131 Tenm2Q9WTS5 2764 aa9.13□□□□□ -0.95
Usp48-201ENSMUST00000055131 Csmd1Q923L3 3564 aa9.1□□□□□ -0.95
Usp48-201ENSMUST00000055131 Zfhx4Q9JJN2 3550 aa9.08□□□□□ -0.96
Usp48-201ENSMUST00000055131 Gm9112A2AI92 75 aa9.06□□□□□ -0.96
Usp48-201ENSMUST00000055131 Gm40193A0A1B0GT39 78 aa9.05□□□□□ -0.96
Usp48-201ENSMUST00000055131 SpenQ62504 3644 aaKnown RBP8.97□□□□□ -0.97
Usp48-201ENSMUST00000055131 B930094E09RikQ8C4T2 136 aa8.97□□□□□ -0.97
Usp48-201ENSMUST00000055131 A930033H14RikG5E8X6 103 aa8.94□□□□□ -0.98
Usp48-201ENSMUST00000055131 2310079G19RikQ9D6L6 185 aa8.9□□□□□ -0.98
Usp48-201ENSMUST00000055131 Gm9736A0A1W2P7N1 277 aa8.85□□□□□ -0.99
Usp48-201ENSMUST00000055131 Fbn1Q61554 2873 aaKnown RBP8.81□□□□□ -1
Usp48-201ENSMUST00000055131 Gm884A2A9H6 3643 aa8.8□□□□□ -1
Usp48-201ENSMUST00000055131 Col7a1Q63870 2944 aa8.78□□□□□ -1
Usp48-201ENSMUST00000055131 VwfQ8CIZ8 2813 aa8.77□□□□□ -1.01
Usp48-201ENSMUST00000055131 Svep1A2AVA0 3567 aa8.75□□□□□ -1.01
Usp48-201ENSMUST00000055131 Gm17416Q30KP4 66 aa8.7□□□□□ -1.02
Usp48-201ENSMUST00000055131 Gm9918Q8BUR5 174 aa8.59□□□□□ -1.03
Usp48-201ENSMUST00000055131 2210017I01RikA0A0A6YVV1 95 aa8.58□□□□□ -1.04
Usp48-201ENSMUST00000055131 Cmya5Q70KF4 3739 aa8.58□□□□□ -1.04
Usp48-201ENSMUST00000055131 Csmd2V9GX34 3611 aa8.53□□□□□ -1.04
Usp48-201ENSMUST00000055131 Prm2P07978 107 aa8.53□□□□□ -1.04
Usp48-201ENSMUST00000055131 Gm10318A0A1W2P728 225 aa8.49□□□□□ -1.05
Usp48-201ENSMUST00000055131 Muc4Q8JZM8 3443 aa8.48□□□□□ -1.05
Usp48-201ENSMUST00000055131 Gm17402F6Z0L5 76 aa8.43□□□□□ -1.06
Usp48-201ENSMUST00000055131 Megf8P60882 2789 aa8.43□□□□□ -1.06
Usp48-201ENSMUST00000055131 Ank2Q8C8R3 3898 aa8.43□□□□□ -1.06
Usp48-201ENSMUST00000055131 Muc6Q80T03 2850 aa8.37□□□□□ -1.07
Usp48-201ENSMUST00000055131 Crct1Q6PAI5 102 aa8.31□□□□□ -1.08
Usp48-201ENSMUST00000055131 Gm11939A2A592 99 aa8.31□□□□□ -1.08
Usp48-201ENSMUST00000055131 Krtap19-5O08632 62 aa8.3□□□□□ -1.08
Usp48-201ENSMUST00000055131 Gm19668J3QMD1 248 aa8.26□□□□□ -1.09
Usp48-201ENSMUST00000055131 Krtap13-1Q8K198 168 aa8.2□□□□□ -1.1
Usp48-201ENSMUST00000055131 LystP97412 3788 aa8.07□□□□□ -1.12
Usp48-201ENSMUST00000055131 Dnah14A0A140LIJ4 4489 aa8.03□□□□□ -1.12
Usp48-201ENSMUST00000055131 Krtap3-1A2A591 98 aa8.01□□□□□ -1.13
Usp48-201ENSMUST00000055131 Krtap3-2Q9D638 99 aa8□□□□□ -1.13
Usp48-201ENSMUST00000055131 Krtap3-3Q9D7P0 99 aa8□□□□□ -1.13
Usp48-201ENSMUST00000055131 4933428G20RikQ9D3X4 101 aa8□□□□□ -1.13
Usp48-201ENSMUST00000055131 CubnQ9JLB4 3623 aa7.94□□□□□ -1.14
Usp48-201ENSMUST00000055131 Huwe1Q7TMY8 4377 aaKnown RBP7.91□□□□□ -1.14
Usp48-201ENSMUST00000055131 Dnah10D3YYQ8 4591 aa7.71□□□□□ -1.17
Usp48-201ENSMUST00000055131 Gm18596A0A1W2P860 280 aa7.7□□□□□ -1.18
Usp48-201ENSMUST00000055131 BsnO88737 3942 aa7.63□□□□□ -1.19
Usp48-201ENSMUST00000055131 Hspg2Q05793 3707 aaKnown RBP7.61□□□□□ -1.19
Usp48-201ENSMUST00000055131 Dnah5Q8VHE6 4621 aa7.6□□□□□ -1.19
Usp48-201ENSMUST00000055131 Csmd3Q80T79 3707 aa7.6□□□□□ -1.19
Usp48-201ENSMUST00000055131 Gm6358A0A087WPH4 74 aa7.59□□□□□ -1.19
Usp48-201ENSMUST00000055131 Xirp2Q4U4S6 3784 aa7.58□□□□□ -1.2
Usp48-201ENSMUST00000055131 PlecQ9QXS1 4691 aaKnown RBP7.48□□□□□ -1.21
Usp48-201ENSMUST00000055131 Krtap1-5A2A590 122 aa7.46□□□□□ -1.22
Usp48-201ENSMUST00000055131 LorP18165 486 aa7.45□□□□□ -1.22
Usp48-201ENSMUST00000055131 Sprr2a3Q4KL71 83 aa7.42□□□□□ -1.22
Usp48-201ENSMUST00000055131 Sprr2a1Q9CQK8 83 aa7.42□□□□□ -1.22
Usp48-201ENSMUST00000055131 Stard9Q80TF6 4561 aa7.41□□□□□ -1.22
Usp48-201ENSMUST00000055131 Vps13dB1ART2 4390 aa7.41□□□□□ -1.22
Usp48-201ENSMUST00000055131 Krtap19-9aF8WH65 55 aa7.38□□□□□ -1.23
Usp48-201ENSMUST00000055131 Krtap7-1Q9D3I6 87 aa7.35□□□□□ -1.23
Usp48-201ENSMUST00000055131 Dnah17Q69Z23 4481 aa7.32□□□□□ -1.24
Usp48-201ENSMUST00000055131 Krtap8-1O08633 61 aa7.3□□□□□ -1.24
Usp48-201ENSMUST00000055131 Krtap1-4Q3V2D6 188 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms