RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

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Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Tenm4Q3UHK6 2771 aa9,94□□□□□ -0,82
Usp48-201ENSMUST00000055131 Zzef1Q5SSH7 2924 aa9,93□□□□□ -0,82
Usp48-201ENSMUST00000055131 Myo15aQ9QZZ4 3511 aa9,91□□□□□ -0,82
Usp48-201ENSMUST00000055131 Wdfy3Q6VNB8 3508 aa9,89□□□□□ -0,83
Usp48-201ENSMUST00000055131 SpegQ62407 3262 aa9,86□□□□□ -0,83
Usp48-201ENSMUST00000055131 FlncQ8VHX6 2726 aaKnown RBP9,85□□□□□ -0,83
Usp48-201ENSMUST00000055131 SmcpP15265 143 aa9,84□□□□□ -0,83
Usp48-201ENSMUST00000055131 Zfhx3Q61329 3726 aa9,79□□□□□ -0,84
Usp48-201ENSMUST00000055131 RelnQ60841 3461 aa9,78□□□□□ -0,84
Usp48-201ENSMUST00000055131 Gm2696A0A1W2P709 240 aa9,78□□□□□ -0,84
Usp48-201ENSMUST00000055131 Celsr2Q9R0M0 2920 aa9,77□□□□□ -0,84
Usp48-201ENSMUST00000055131 FcgbpE9Q0B5 2583 aa9,77□□□□□ -0,85
Usp48-201ENSMUST00000055131 Tnp2P11378 117 aa9,77□□□□□ -0,85
Usp48-201ENSMUST00000055131 Cox6b2Q80ZN9 88 aa9,75□□□□□ -0,85
Usp48-201ENSMUST00000055131 Rps29P62274 56 aa9,74□□□□□ -0,85
Usp48-201ENSMUST00000055131 Trank1Q8BV79 2999 aa9,73□□□□□ -0,85
Usp48-201ENSMUST00000055131 Chd9Q8BYH8 2885 aa9,72□□□□□ -0,85
Usp48-201ENSMUST00000055131 D6Ertd527eA0A0N4SWI3 464 aa9,64□□□□□ -0,87
Usp48-201ENSMUST00000055131 DmdP11531 3678 aa9,57□□□□□ -0,88
Usp48-201ENSMUST00000055131 Akap9Q70FJ1 3797 aa9,56□□□□□ -0,88
Usp48-201ENSMUST00000055131 Nf1Q04690 2841 aa9,56□□□□□ -0,88
Usp48-201ENSMUST00000055131 LrbaQ9ESE1 2856 aa9,55□□□□□ -0,88
Usp48-201ENSMUST00000055131 Vps13cQ8BX70 3748 aa9,55□□□□□ -0,88
Usp48-201ENSMUST00000055131 Tenm3Q9WTS6 2715 aa9,55□□□□□ -0,88
Usp48-201ENSMUST00000055131 Srrm2Q8BTI8 2703 aaKnown RBP9,52□□□□□ -0,89
Usp48-201ENSMUST00000055131 Pdzd2E9Q1M1 2796 aa9,5□□□□□ -0,89
Usp48-201ENSMUST00000055131 Muc5acE9QAQ8 3455 aa9,5□□□□□ -0,89
Usp48-201ENSMUST00000055131 Gm21887J3QQ04 176 aa9,46□□□□□ -0,89
Usp48-201ENSMUST00000055131 ApcQ61315 2845 aa9,46□□□□□ -0,89
Usp48-201ENSMUST00000055131 Gm5965D3Z724 196 aa9,43□□□□□ -0,9
Usp48-201ENSMUST00000055131 TgO08710 2766 aa9,43□□□□□ -0,9
Usp48-201ENSMUST00000055131 Ndufaf8A2AMZ4 74 aa9,43□□□□□ -0,9
Usp48-201ENSMUST00000055131 2310057N15RikQ9D6T8 200 aa9,38□□□□□ -0,91
Usp48-201ENSMUST00000055131 Lama5Q61001 3718 aa9,19□□□□□ -0,94
Usp48-201ENSMUST00000055131 Helz2E9QAM5 2947 aaKnown RBP9,19□□□□□ -0,94
Usp48-201ENSMUST00000055131 Tnp1P10856 55 aa9,17□□□□□ -0,94
Usp48-201ENSMUST00000055131 OtogO55225 2910 aa9,15□□□□□ -0,94
Usp48-201ENSMUST00000055131 Smg1Q8BKX6 3658 aaKnown RBP9,15□□□□□ -0,94
Usp48-201ENSMUST00000055131 Gm20537G3UYK7 97 aa9,15□□□□□ -0,94
Usp48-201ENSMUST00000055131 Tenm1Q9WTS4 2731 aa9,13□□□□□ -0,95
Usp48-201ENSMUST00000055131 Tenm2Q9WTS5 2764 aa9,13□□□□□ -0,95
Usp48-201ENSMUST00000055131 Csmd1Q923L3 3564 aa9,1□□□□□ -0,95
Usp48-201ENSMUST00000055131 Zfhx4Q9JJN2 3550 aa9,08□□□□□ -0,96
Usp48-201ENSMUST00000055131 Gm9112A2AI92 75 aa9,06□□□□□ -0,96
Usp48-201ENSMUST00000055131 Gm40193A0A1B0GT39 78 aa9,05□□□□□ -0,96
Usp48-201ENSMUST00000055131 SpenQ62504 3644 aaKnown RBP8,97□□□□□ -0,97
Usp48-201ENSMUST00000055131 B930094E09RikQ8C4T2 136 aa8,97□□□□□ -0,97
Usp48-201ENSMUST00000055131 A930033H14RikG5E8X6 103 aa8,94□□□□□ -0,98
Usp48-201ENSMUST00000055131 2310079G19RikQ9D6L6 185 aa8,9□□□□□ -0,98
Usp48-201ENSMUST00000055131 Gm9736A0A1W2P7N1 277 aa8,85□□□□□ -0,99
Usp48-201ENSMUST00000055131 Fbn1Q61554 2873 aaKnown RBP8,81□□□□□ -1
Usp48-201ENSMUST00000055131 Gm884A2A9H6 3643 aa8,8□□□□□ -1
Usp48-201ENSMUST00000055131 Col7a1Q63870 2944 aa8,78□□□□□ -1
Usp48-201ENSMUST00000055131 VwfQ8CIZ8 2813 aa8,77□□□□□ -1,01
Usp48-201ENSMUST00000055131 Svep1A2AVA0 3567 aa8,75□□□□□ -1,01
Usp48-201ENSMUST00000055131 Gm17416Q30KP4 66 aa8,7□□□□□ -1,02
Usp48-201ENSMUST00000055131 Gm9918Q8BUR5 174 aa8,59□□□□□ -1,03
Usp48-201ENSMUST00000055131 2210017I01RikA0A0A6YVV1 95 aa8,58□□□□□ -1,04
Usp48-201ENSMUST00000055131 Cmya5Q70KF4 3739 aa8,58□□□□□ -1,04
Usp48-201ENSMUST00000055131 Csmd2V9GX34 3611 aa8,53□□□□□ -1,04
Usp48-201ENSMUST00000055131 Prm2P07978 107 aa8,53□□□□□ -1,04
Usp48-201ENSMUST00000055131 Gm10318A0A1W2P728 225 aa8,49□□□□□ -1,05
Usp48-201ENSMUST00000055131 Muc4Q8JZM8 3443 aa8,48□□□□□ -1,05
Usp48-201ENSMUST00000055131 Gm17402F6Z0L5 76 aa8,43□□□□□ -1,06
Usp48-201ENSMUST00000055131 Megf8P60882 2789 aa8,43□□□□□ -1,06
Usp48-201ENSMUST00000055131 Ank2Q8C8R3 3898 aa8,43□□□□□ -1,06
Usp48-201ENSMUST00000055131 Muc6Q80T03 2850 aa8,37□□□□□ -1,07
Usp48-201ENSMUST00000055131 Crct1Q6PAI5 102 aa8,31□□□□□ -1,08
Usp48-201ENSMUST00000055131 Gm11939A2A592 99 aa8,31□□□□□ -1,08
Usp48-201ENSMUST00000055131 Krtap19-5O08632 62 aa8,3□□□□□ -1,08
Usp48-201ENSMUST00000055131 Gm19668J3QMD1 248 aa8,26□□□□□ -1,09
Usp48-201ENSMUST00000055131 Krtap13-1Q8K198 168 aa8,2□□□□□ -1,1
Usp48-201ENSMUST00000055131 LystP97412 3788 aa8,07□□□□□ -1,12
Usp48-201ENSMUST00000055131 Dnah14A0A140LIJ4 4489 aa8,03□□□□□ -1,12
Usp48-201ENSMUST00000055131 Krtap3-1A2A591 98 aa8,01□□□□□ -1,13
Usp48-201ENSMUST00000055131 Krtap3-2Q9D638 99 aa8□□□□□ -1,13
Usp48-201ENSMUST00000055131 Krtap3-3Q9D7P0 99 aa8□□□□□ -1,13
Usp48-201ENSMUST00000055131 4933428G20RikQ9D3X4 101 aa8□□□□□ -1,13
Usp48-201ENSMUST00000055131 CubnQ9JLB4 3623 aa7,94□□□□□ -1,14
Usp48-201ENSMUST00000055131 Huwe1Q7TMY8 4377 aaKnown RBP7,91□□□□□ -1,14
Usp48-201ENSMUST00000055131 Dnah10D3YYQ8 4591 aa7,71□□□□□ -1,17
Usp48-201ENSMUST00000055131 Gm18596A0A1W2P860 280 aa7,7□□□□□ -1,18
Usp48-201ENSMUST00000055131 BsnO88737 3942 aa7,63□□□□□ -1,19
Usp48-201ENSMUST00000055131 Hspg2Q05793 3707 aaKnown RBP7,61□□□□□ -1,19
Usp48-201ENSMUST00000055131 Dnah5Q8VHE6 4621 aa7,6□□□□□ -1,19
Usp48-201ENSMUST00000055131 Csmd3Q80T79 3707 aa7,6□□□□□ -1,19
Usp48-201ENSMUST00000055131 Gm6358A0A087WPH4 74 aa7,59□□□□□ -1,19
Usp48-201ENSMUST00000055131 Xirp2Q4U4S6 3784 aa7,58□□□□□ -1,2
Usp48-201ENSMUST00000055131 PlecQ9QXS1 4691 aaKnown RBP7,48□□□□□ -1,21
Usp48-201ENSMUST00000055131 Krtap1-5A2A590 122 aa7,46□□□□□ -1,22
Usp48-201ENSMUST00000055131 LorP18165 486 aa7,45□□□□□ -1,22
Usp48-201ENSMUST00000055131 Sprr2a3Q4KL71 83 aa7,42□□□□□ -1,22
Usp48-201ENSMUST00000055131 Sprr2a1Q9CQK8 83 aa7,42□□□□□ -1,22
Usp48-201ENSMUST00000055131 Stard9Q80TF6 4561 aa7,41□□□□□ -1,22
Usp48-201ENSMUST00000055131 Vps13dB1ART2 4390 aa7,41□□□□□ -1,22
Usp48-201ENSMUST00000055131 Krtap19-9aF8WH65 55 aa7,38□□□□□ -1,23
Usp48-201ENSMUST00000055131 Krtap7-1Q9D3I6 87 aa7,35□□□□□ -1,23
Usp48-201ENSMUST00000055131 Dnah17Q69Z23 4481 aa7,32□□□□□ -1,24
Usp48-201ENSMUST00000055131 Krtap8-1O08633 61 aa7,3□□□□□ -1,24
Usp48-201ENSMUST00000055131 Krtap1-4Q3V2D6 188 aa7,28□□□□□ -1,24
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms