RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Helz2E9QAM5 2947 aaKnown RBP10,71□□□□□ -0,7
Ebf3-201ENSMUST00000033378 Rpl37Q9D823 97 aa10,69□□□□□ -0,7
Ebf3-201ENSMUST00000033378 LrbaQ9ESE1 2856 aa10,69□□□□□ -0,7
Ebf3-201ENSMUST00000033378 Spink7Q6IE32 76 aa10,69□□□□□ -0,7
Ebf3-201ENSMUST00000033378 Gm9507D3Z5T3 223 aa10,68□□□□□ -0,7
Ebf3-201ENSMUST00000033378 Krtap14O08640 167 aa10,68□□□□□ -0,7
Ebf3-201ENSMUST00000033378 Tenm3Q9WTS6 2715 aa10,65□□□□□ -0,7
Ebf3-201ENSMUST00000033378 Romo1P60603 79 aa10,64□□□□□ -0,71
Ebf3-201ENSMUST00000033378 Myo15aQ9QZZ4 3511 aa10,58□□□□□ -0,72
Ebf3-201ENSMUST00000033378 DmdP11531 3678 aa10,58□□□□□ -0,72
Ebf3-201ENSMUST00000033378 Gm20538F6Z9R1 75 aa10,56□□□□□ -0,72
Ebf3-201ENSMUST00000033378 Krtap10-4Q08EG8 221 aa10,56□□□□□ -0,72
Ebf3-201ENSMUST00000033378 Gm5767A0A0J9YTU8 78 aa10,55□□□□□ -0,72
Ebf3-201ENSMUST00000033378 Gm10382Q3V0T5 144 aa10,55□□□□□ -0,72
Ebf3-201ENSMUST00000033378 Tnp2P11378 117 aa10,49□□□□□ -0,73
Ebf3-201ENSMUST00000033378 Cox6b2Q80ZN9 88 aa10,42□□□□□ -0,74
Ebf3-201ENSMUST00000033378 Zfhx3Q61329 3726 aa10,41□□□□□ -0,74
Ebf3-201ENSMUST00000033378 D6Ertd527eA0A0N4SWI3 464 aa10,38□□□□□ -0,75
Ebf3-201ENSMUST00000033378 Krtap10-10A0A1W2P7T6 217 aa10,37□□□□□ -0,75
Ebf3-201ENSMUST00000033378 Tenm4Q3UHK6 2771 aa10,36□□□□□ -0,75
Ebf3-201ENSMUST00000033378 BC029722A0A0N4SW31 51 aa10,35□□□□□ -0,75
Ebf3-201ENSMUST00000033378 Camk2n1Q6QWF9 78 aa10,35□□□□□ -0,75
Ebf3-201ENSMUST00000033378 Akap9Q70FJ1 3797 aa10,33□□□□□ -0,76
Ebf3-201ENSMUST00000033378 Fam229aB2KGE5 128 aa10,27□□□□□ -0,77
Ebf3-201ENSMUST00000033378 Muc5acE9QAQ8 3455 aa10,26□□□□□ -0,77
Ebf3-201ENSMUST00000033378 Rps29P62274 56 aa10,26□□□□□ -0,77
Ebf3-201ENSMUST00000033378 Gm19426M0QWC7 77 aa10,25□□□□□ -0,77
Ebf3-201ENSMUST00000033378 Csmd1Q923L3 3564 aa10,24□□□□□ -0,77
Ebf3-201ENSMUST00000033378 Vps13cQ8BX70 3748 aa10,22□□□□□ -0,77
Ebf3-201ENSMUST00000033378 Sec61bQ9CQS8 96 aaKnown RBP10,21□□□□□ -0,78
Ebf3-201ENSMUST00000033378 Tenm1Q9WTS4 2731 aa10,13□□□□□ -0,79
Ebf3-201ENSMUST00000033378 SpenQ62504 3644 aaKnown RBP10,13□□□□□ -0,79
Ebf3-201ENSMUST00000033378 Gm2696A0A1W2P709 240 aa10,1□□□□□ -0,79
Ebf3-201ENSMUST00000033378 Smg1Q8BKX6 3658 aaKnown RBP10,03□□□□□ -0,8
Ebf3-201ENSMUST00000033378 OtogO55225 2910 aa10,02□□□□□ -0,81
Ebf3-201ENSMUST00000033378 Ndufaf8A2AMZ4 74 aa10□□□□□ -0,81
Ebf3-201ENSMUST00000033378 Gm20537G3UYK7 97 aa9,96□□□□□ -0,81
Ebf3-201ENSMUST00000033378 Zfhx4Q9JJN2 3550 aa9,89□□□□□ -0,83
Ebf3-201ENSMUST00000033378 2310079G19RikQ9D6L6 185 aa9,85□□□□□ -0,83
Ebf3-201ENSMUST00000033378 Gm5965D3Z724 196 aa9,82□□□□□ -0,84
Ebf3-201ENSMUST00000033378 A930033H14RikG5E8X6 103 aa9,8□□□□□ -0,84
Ebf3-201ENSMUST00000033378 Tenm2Q9WTS5 2764 aa9,78□□□□□ -0,84
Ebf3-201ENSMUST00000033378 Gm884A2A9H6 3643 aa9,78□□□□□ -0,84
Ebf3-201ENSMUST00000033378 Lama5Q61001 3718 aa9,77□□□□□ -0,84
Ebf3-201ENSMUST00000033378 VwfQ8CIZ8 2813 aa9,7□□□□□ -0,86
Ebf3-201ENSMUST00000033378 Megf8P60882 2789 aa9,67□□□□□ -0,86
Ebf3-201ENSMUST00000033378 Gm21887J3QQ04 176 aa9,67□□□□□ -0,86
Ebf3-201ENSMUST00000033378 Gm9112A2AI92 75 aa9,58□□□□□ -0,88
Ebf3-201ENSMUST00000033378 Gm40193A0A1B0GT39 78 aa9,55□□□□□ -0,88
Ebf3-201ENSMUST00000033378 Fbn1Q61554 2873 aaKnown RBP9,52□□□□□ -0,88
Ebf3-201ENSMUST00000033378 2310057N15RikQ9D6T8 200 aa9,52□□□□□ -0,89
Ebf3-201ENSMUST00000033378 B930094E09RikQ8C4T2 136 aa9,51□□□□□ -0,89
Ebf3-201ENSMUST00000033378 Muc4Q8JZM8 3443 aa9,5□□□□□ -0,89
Ebf3-201ENSMUST00000033378 Svep1A2AVA0 3567 aa9,46□□□□□ -0,9
Ebf3-201ENSMUST00000033378 Cmya5Q70KF4 3739 aa9,43□□□□□ -0,9
Ebf3-201ENSMUST00000033378 Tnp1P10856 55 aa9,37□□□□□ -0,91
Ebf3-201ENSMUST00000033378 Col7a1Q63870 2944 aa9,36□□□□□ -0,91
Ebf3-201ENSMUST00000033378 Gm17416Q30KP4 66 aa9,34□□□□□ -0,91
Ebf3-201ENSMUST00000033378 Gm9736A0A1W2P7N1 277 aa9,27□□□□□ -0,93
Ebf3-201ENSMUST00000033378 2210017I01RikA0A0A6YVV1 95 aa9,21□□□□□ -0,93
Ebf3-201ENSMUST00000033378 Gm11939A2A592 99 aa9,19□□□□□ -0,94
Ebf3-201ENSMUST00000033378 Prm2P07978 107 aa9,15□□□□□ -0,95
Ebf3-201ENSMUST00000033378 Krtap3-2Q9D638 99 aa9,1□□□□□ -0,95
Ebf3-201ENSMUST00000033378 Krtap3-3Q9D7P0 99 aa9,1□□□□□ -0,95
Ebf3-201ENSMUST00000033378 Muc6Q80T03 2850 aa9,08□□□□□ -0,96
Ebf3-201ENSMUST00000033378 Gm9918Q8BUR5 174 aa9,03□□□□□ -0,96
Ebf3-201ENSMUST00000033378 Csmd2V9GX34 3611 aa9,01□□□□□ -0,97
Ebf3-201ENSMUST00000033378 Gm17402F6Z0L5 76 aa9,01□□□□□ -0,97
Ebf3-201ENSMUST00000033378 LystP97412 3788 aa8,86□□□□□ -0,99
Ebf3-201ENSMUST00000033378 Ank2Q8C8R3 3898 aa8,86□□□□□ -0,99
Ebf3-201ENSMUST00000033378 CubnQ9JLB4 3623 aa8,79□□□□□ -1
Ebf3-201ENSMUST00000033378 Krtap19-5O08632 62 aa8,78□□□□□ -1
Ebf3-201ENSMUST00000033378 Krtap3-1A2A591 98 aa8,78□□□□□ -1
Ebf3-201ENSMUST00000033378 Krtap13-1Q8K198 168 aa8,76□□□□□ -1,01
Ebf3-201ENSMUST00000033378 Gm10318A0A1W2P728 225 aa8,72□□□□□ -1,01
Ebf3-201ENSMUST00000033378 Gm19668J3QMD1 248 aa8,6□□□□□ -1,03
Ebf3-201ENSMUST00000033378 Dnah14A0A140LIJ4 4489 aa8,53□□□□□ -1,04
Ebf3-201ENSMUST00000033378 Crct1Q6PAI5 102 aa8,5□□□□□ -1,05
Ebf3-201ENSMUST00000033378 Dnah10D3YYQ8 4591 aa8,37□□□□□ -1,07
Ebf3-201ENSMUST00000033378 Csmd3Q80T79 3707 aa8,34□□□□□ -1,07
Ebf3-201ENSMUST00000033378 Xirp2Q4U4S6 3784 aa8,32□□□□□ -1,08
Ebf3-201ENSMUST00000033378 Huwe1Q7TMY8 4377 aaKnown RBP8,23□□□□□ -1,09
Ebf3-201ENSMUST00000033378 BsnO88737 3942 aa8,23□□□□□ -1,09
Ebf3-201ENSMUST00000033378 Hspg2Q05793 3707 aaKnown RBP8,22□□□□□ -1,09
Ebf3-201ENSMUST00000033378 Krtap7-1Q9D3I6 87 aa8,22□□□□□ -1,09
Ebf3-201ENSMUST00000033378 Dnah5Q8VHE6 4621 aa8,21□□□□□ -1,09
Ebf3-201ENSMUST00000033378 4933428G20RikQ9D3X4 101 aa8,16□□□□□ -1,1
Ebf3-201ENSMUST00000033378 Sprr2a3Q4KL71 83 aa8,1□□□□□ -1,11
Ebf3-201ENSMUST00000033378 Sprr2a1Q9CQK8 83 aa8,1□□□□□ -1,11
Ebf3-201ENSMUST00000033378 Stard9Q80TF6 4561 aa8,07□□□□□ -1,12
Ebf3-201ENSMUST00000033378 Krtap1-5A2A590 122 aa8,06□□□□□ -1,12
Ebf3-201ENSMUST00000033378 Dnah17Q69Z23 4481 aa8,03□□□□□ -1,12
Ebf3-201ENSMUST00000033378 Vps13dB1ART2 4390 aa8,01□□□□□ -1,13
Ebf3-201ENSMUST00000033378 PlecQ9QXS1 4691 aaKnown RBP7,98□□□□□ -1,13
Ebf3-201ENSMUST00000033378 Gm19402J3QJV4 266 aa7,92□□□□□ -1,14
Ebf3-201ENSMUST00000033378 Dnah11E9Q7N9 4488 aa7,88□□□□□ -1,15
Ebf3-201ENSMUST00000033378 Dnah7bL7N1Y0 4068 aa7,82□□□□□ -1,16
Ebf3-201ENSMUST00000033378 Krtap1-4Q3V2D6 188 aa7,78□□□□□ -1,16
Ebf3-201ENSMUST00000033378 Dnah9B1AR51 4484 aa7,78□□□□□ -1,16
Ebf3-201ENSMUST00000033378 Krtap19-9aF8WH65 55 aa7,74□□□□□ -1,17
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms