RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Dnah9B1AR51 4484 aa5.68□□□□□ -1.5
Copb1-201ENSMUST00000033012 4930507D05RikQ8C9C9 103 aa5.68□□□□□ -1.5
Copb1-201ENSMUST00000033012 D6Ertd527eA0A0N4SWI3 464 aa5.67□□□□□ -1.5
Copb1-201ENSMUST00000033012 A930033H14RikG5E8X6 103 aa5.67□□□□□ -1.5
Copb1-201ENSMUST00000033012 FlnbQ80X90 2602 aaKnown RBP5.67□□□□□ -1.5
Copb1-201ENSMUST00000033012 AtrQ9JKK8 2635 aa5.67□□□□□ -1.5
Copb1-201ENSMUST00000033012 Hivep1Q03172 2688 aa5.67□□□□□ -1.5
Copb1-201ENSMUST00000033012 Gm10065F6TJM2 114 aa5.66□□□□□ -1.5
Copb1-201ENSMUST00000033012 Nsd1O88491 2588 aaKnown RBP5.66□□□□□ -1.5
Copb1-201ENSMUST00000033012 Itpr2Q9Z329 2701 aa5.66□□□□□ -1.5
Copb1-201ENSMUST00000033012 CicQ924A2 2510 aa5.65□□□□□ -1.5
Copb1-201ENSMUST00000033012 Defb39Q70KL3 74 aa5.65□□□□□ -1.51
Copb1-201ENSMUST00000033012 Sslp1Q3UN54 99 aa5.64□□□□□ -1.51
Copb1-201ENSMUST00000033012 Gm7138L7N2C3 230 aa5.64□□□□□ -1.51
Copb1-201ENSMUST00000033012 Gm3238W4VSP7 230 aa5.64□□□□□ -1.51
Copb1-201ENSMUST00000033012 Gm9508A0A1W2P7W0 230 aa5.63□□□□□ -1.51
Copb1-201ENSMUST00000033012 Krtap29-1A2A5X4 342 aa5.63□□□□□ -1.51
Copb1-201ENSMUST00000033012 Krtap3-2Q9D638 99 aa5.63□□□□□ -1.51
Copb1-201ENSMUST00000033012 Krtap3-3Q9D7P0 99 aa5.63□□□□□ -1.51
Copb1-201ENSMUST00000033012 CriptO70333 101 aa5.62□□□□□ -1.51
Copb1-201ENSMUST00000033012 Krtap13O88375 197 aa5.62□□□□□ -1.51
Copb1-201ENSMUST00000033012 NbdyA0A0N4SUI7 68 aa5.61□□□□□ -1.51
Copb1-201ENSMUST00000033012 Tenm4Q3UHK6 2771 aa5.61□□□□□ -1.51
Copb1-201ENSMUST00000033012 Wfdc3Q14AE4 130 aa5.59□□□□□ -1.52
Copb1-201ENSMUST00000033012 Igsf10Q3V1M1 2594 aa5.59□□□□□ -1.52
Copb1-201ENSMUST00000033012 Wfdc17Q5SSJ1 76 aa5.58□□□□□ -1.52
Copb1-201ENSMUST00000033012 Nupr2Q497P3 102 aa5.58□□□□□ -1.52
Copb1-201ENSMUST00000033012 Adm2Q7TNK8 150 aa5.58□□□□□ -1.52
Copb1-201ENSMUST00000033012 Mast4Q811L6 2618 aa5.57□□□□□ -1.52
Copb1-201ENSMUST00000033012 Dnah14A0A140LIJ4 4489 aa5.57□□□□□ -1.52
Copb1-201ENSMUST00000033012 Krtap10-10A0A1W2P7T6 217 aa5.56□□□□□ -1.52
Copb1-201ENSMUST00000033012 2310050C09RikG5E8Z3 280 aa5.56□□□□□ -1.52
Copb1-201ENSMUST00000033012 Spaca4Q80ZQ0 127 aa5.55□□□□□ -1.52
Copb1-201ENSMUST00000033012 Tnp2P11378 117 aa5.54□□□□□ -1.52
Copb1-201ENSMUST00000033012 Dnah10D3YYQ8 4591 aa5.53□□□□□ -1.52
Copb1-201ENSMUST00000033012 Hectd4E9Q2E4 4418 aa5.53□□□□□ -1.52
Copb1-201ENSMUST00000033012 Gpr15lA0A0B4J1N3 78 aa5.52□□□□□ -1.53
Copb1-201ENSMUST00000033012 Dync2h1Q45VK7 4306 aa5.5□□□□□ -1.53
Copb1-201ENSMUST00000033012 Ndufaf8A2AMZ4 74 aa5.5□□□□□ -1.53
Copb1-201ENSMUST00000033012 Cox6b2Q80ZN9 88 aa5.5□□□□□ -1.53
Copb1-201ENSMUST00000033012 Gm4491E0CX42 125 aa5.49□□□□□ -1.53
Copb1-201ENSMUST00000033012 Pkd1l1Q8R526 2615 aa5.49□□□□□ -1.53
Copb1-201ENSMUST00000033012 Gm9955Q8CEJ8 102 aa5.46□□□□□ -1.53
Copb1-201ENSMUST00000033012 Dnah7aE9Q0T8 4024 aa5.46□□□□□ -1.54
Copb1-201ENSMUST00000033012 Dnah6E9Q0B6 4144 aa5.45□□□□□ -1.54
Copb1-201ENSMUST00000033012 Stab1Q8R4Y4 2571 aa5.43□□□□□ -1.54
Copb1-201ENSMUST00000033012 Muc6Q80T03 2850 aa5.42□□□□□ -1.54
Copb1-201ENSMUST00000033012 Dnah2P0C6F1 4456 aa5.42□□□□□ -1.54
Copb1-201ENSMUST00000033012 Gm10382Q3V0T5 144 aa5.41□□□□□ -1.54
Copb1-201ENSMUST00000033012 Gm7137J3QMW1 236 aa5.4□□□□□ -1.55
Copb1-201ENSMUST00000033012 Fn1P11276 2477 aaKnown RBP5.4□□□□□ -1.55
Copb1-201ENSMUST00000033012 1600014C23RikQ9DAX4 101 aa5.39□□□□□ -1.55
Copb1-201ENSMUST00000033012 Gm36176A0A1W2P8D5 158 aa5.39□□□□□ -1.55
Copb1-201ENSMUST00000033012 Rpl37Q9D823 97 aa5.39□□□□□ -1.55
Copb1-201ENSMUST00000033012 Stab2Q8R4U0 2559 aa5.36□□□□□ -1.55
Copb1-201ENSMUST00000033012 9530053A07RikE9PVG8 2581 aa5.36□□□□□ -1.55
Copb1-201ENSMUST00000033012 Vps13dB1ART2 4390 aa5.36□□□□□ -1.55
Copb1-201ENSMUST00000033012 Dnah7cA0A087WR13 4024 aa5.35□□□□□ -1.55
Copb1-201ENSMUST00000033012 Gm9918Q8BUR5 174 aa5.34□□□□□ -1.55
Copb1-201ENSMUST00000033012 ApobE9Q414 4505 aa5.33□□□□□ -1.56
Copb1-201ENSMUST00000033012 Fras1Q80T14 4010 aa5.32□□□□□ -1.56
Copb1-201ENSMUST00000033012 Dnah5Q8VHE6 4621 aa5.31□□□□□ -1.56
Copb1-201ENSMUST00000033012 Huwe1Q7TMY8 4377 aaKnown RBP5.3□□□□□ -1.56
Copb1-201ENSMUST00000033012 Rnase13Q5GAM7 153 aa5.3□□□□□ -1.56
Copb1-201ENSMUST00000033012 Gm17606F6ZL36 78 aa5.26□□□□□ -1.57
Copb1-201ENSMUST00000033012 RetnlbQ99P86 105 aa5.26□□□□□ -1.57
Copb1-201ENSMUST00000033012 Stard9Q80TF6 4561 aa5.25□□□□□ -1.57
Copb1-201ENSMUST00000033012 Ly6g6cQ9Z1Q4 126 aa5.25□□□□□ -1.57
Copb1-201ENSMUST00000033012 Gm21887J3QQ04 176 aa5.24□□□□□ -1.57
Copb1-201ENSMUST00000033012 PlecQ9QXS1 4691 aaKnown RBP5.24□□□□□ -1.57
Copb1-201ENSMUST00000033012 Gm11939A2A592 99 aa5.23□□□□□ -1.57
Copb1-201ENSMUST00000033012 Defb10Q8R2I8 73 aa5.22□□□□□ -1.57
Copb1-201ENSMUST00000033012 Lrp1bQ9JI18 4599 aa5.2□□□□□ -1.58
Copb1-201ENSMUST00000033012 Gm5965D3Z724 196 aa5.2□□□□□ -1.58
Copb1-201ENSMUST00000033012 Krtap7-1Q9D3I6 87 aa5.19□□□□□ -1.58
Copb1-201ENSMUST00000033012 Pkd1O08852 4293 aa5.19□□□□□ -1.58
Copb1-201ENSMUST00000033012 PrkdcP97313 4128 aa5.17□□□□□ -1.58
Copb1-201ENSMUST00000033012 Rps29P62274 56 aa5.17□□□□□ -1.58
Copb1-201ENSMUST00000033012 Gm9112A2AI92 75 aa5.15□□□□□ -1.58
Copb1-201ENSMUST00000033012 B930094E09RikQ8C4T2 136 aa5.15□□□□□ -1.59
Copb1-201ENSMUST00000033012 Pkhd1E9PZ36 4059 aa5.14□□□□□ -1.59
Copb1-201ENSMUST00000033012 Gm17349F7BGH6 99 aa5.13□□□□□ -1.59
Copb1-201ENSMUST00000033012 TnxbO35452 4006 aa5.12□□□□□ -1.59
Copb1-201ENSMUST00000033012 Gm9507D3Z5T3 223 aa5.12□□□□□ -1.59
Copb1-201ENSMUST00000033012 Vps13bQ80TY5 3993 aa5.11□□□□□ -1.59
Copb1-201ENSMUST00000033012 SacsQ9JLC8 4582 aa5.1□□□□□ -1.59
Copb1-201ENSMUST00000033012 Gm19426M0QWC7 77 aa5.1□□□□□ -1.59
Copb1-201ENSMUST00000033012 2310057N15RikQ9D6T8 200 aa5.07□□□□□ -1.6
Copb1-201ENSMUST00000033012 Gm40193A0A1B0GT39 78 aa5.06□□□□□ -1.6
Copb1-201ENSMUST00000033012 FcgbpE9Q0B5 2583 aa5.06□□□□□ -1.6
Copb1-201ENSMUST00000033012 Fam229aB2KGE5 128 aa5.03□□□□□ -1.6
Copb1-201ENSMUST00000033012 Fat2Q5F226 4351 aa5.02□□□□□ -1.61
Copb1-201ENSMUST00000033012 Krtap3-1A2A591 98 aa5.01□□□□□ -1.61
Copb1-201ENSMUST00000033012 Krtap10-4Q08EG8 221 aa5.01□□□□□ -1.61
Copb1-201ENSMUST00000033012 Pkhd1l1Q80ZA4 4249 aa5□□□□□ -1.61
Copb1-201ENSMUST00000033012 Gm19668J3QMD1 248 aa5□□□□□ -1.61
Copb1-201ENSMUST00000033012 Gm5767A0A0J9YTU8 78 aa4.97□□□□□ -1.61
Copb1-201ENSMUST00000033012 Defb11Q8R2I7 77 aa4.96□□□□□ -1.62
Copb1-201ENSMUST00000033012 Krtap15-1Q9QZU5 150 aa4.96□□□□□ -1.62
Copb1-201ENSMUST00000033012 Gm17416Q30KP4 66 aa4.86□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms