RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Dchs2A0A0A6YW72 3346 aa7.93□□□□□ -1.14
Notch1-201ENSMUST00000028288 SmcpP15265 143 aa7.92□□□□□ -1.14
Notch1-201ENSMUST00000028288 Gm10382Q3V0T5 144 aa7.92□□□□□ -1.14
Notch1-201ENSMUST00000028288 DmdP11531 3678 aa7.91□□□□□ -1.14
Notch1-201ENSMUST00000028288 2310050C09RikG5E8Z3 280 aa7.9□□□□□ -1.14
Notch1-201ENSMUST00000028288 Gm2310J3QNJ2 377 aa7.9□□□□□ -1.15
Notch1-201ENSMUST00000028288 Tenm1Q9WTS4 2731 aa7.87□□□□□ -1.15
Notch1-201ENSMUST00000028288 Sec61bQ9CQS8 96 aaKnown RBP7.85□□□□□ -1.15
Notch1-201ENSMUST00000028288 Krtap13O88375 197 aa7.85□□□□□ -1.15
Notch1-201ENSMUST00000028288 BC029722A0A0N4SW31 51 aa7.82□□□□□ -1.16
Notch1-201ENSMUST00000028288 Myo15aQ9QZZ4 3511 aa7.81□□□□□ -1.16
Notch1-201ENSMUST00000028288 Gm19426M0QWC7 77 aa7.79□□□□□ -1.16
Notch1-201ENSMUST00000028288 Gm9507D3Z5T3 223 aa7.78□□□□□ -1.16
Notch1-201ENSMUST00000028288 Wdfy3Q6VNB8 3508 aa7.76□□□□□ -1.17
Notch1-201ENSMUST00000028288 Krtap14O08640 167 aa7.75□□□□□ -1.17
Notch1-201ENSMUST00000028288 VcanQ62059 3357 aa7.74□□□□□ -1.17
Notch1-201ENSMUST00000028288 Tenm3Q9WTS6 2715 aa7.73□□□□□ -1.17
Notch1-201ENSMUST00000028288 Dchs1E9PVD3 3291 aa7.71□□□□□ -1.18
Notch1-201ENSMUST00000028288 2310061N02RikQ9D6S9 174 aa7.67□□□□□ -1.18
Notch1-201ENSMUST00000028288 Tenm4Q3UHK6 2771 aa7.66□□□□□ -1.18
Notch1-201ENSMUST00000028288 SpegQ62407 3262 aa7.66□□□□□ -1.18
Notch1-201ENSMUST00000028288 Krtap10-4Q08EG8 221 aa7.65□□□□□ -1.18
Notch1-201ENSMUST00000028288 Rps29P62274 56 aa7.65□□□□□ -1.19
Notch1-201ENSMUST00000028288 Cox6b2Q80ZN9 88 aa7.63□□□□□ -1.19
Notch1-201ENSMUST00000028288 Helz2E9QAM5 2947 aaKnown RBP7.62□□□□□ -1.19
Notch1-201ENSMUST00000028288 Tnp2P11378 117 aa7.6□□□□□ -1.19
Notch1-201ENSMUST00000028288 SpenQ62504 3644 aaKnown RBP7.57□□□□□ -1.2
Notch1-201ENSMUST00000028288 RelnQ60841 3461 aa7.56□□□□□ -1.2
Notch1-201ENSMUST00000028288 Krtap10-10A0A1W2P7T6 217 aa7.55□□□□□ -1.2
Notch1-201ENSMUST00000028288 Smg1Q8BKX6 3658 aaKnown RBP7.55□□□□□ -1.2
Notch1-201ENSMUST00000028288 Csmd1Q923L3 3564 aa7.54□□□□□ -1.2
Notch1-201ENSMUST00000028288 D6Ertd527eA0A0N4SWI3 464 aa7.54□□□□□ -1.2
Notch1-201ENSMUST00000028288 Lama5Q61001 3718 aa7.53□□□□□ -1.2
Notch1-201ENSMUST00000028288 OtogO55225 2910 aa7.5□□□□□ -1.21
Notch1-201ENSMUST00000028288 Cmya5Q70KF4 3739 aa7.48□□□□□ -1.21
Notch1-201ENSMUST00000028288 Ank2Q8C8R3 3898 aa7.46□□□□□ -1.21
Notch1-201ENSMUST00000028288 Ndufaf8A2AMZ4 74 aa7.46□□□□□ -1.22
Notch1-201ENSMUST00000028288 Gm884A2A9H6 3643 aa7.41□□□□□ -1.22
Notch1-201ENSMUST00000028288 Gm21887J3QQ04 176 aa7.38□□□□□ -1.23
Notch1-201ENSMUST00000028288 Gm2696A0A1W2P709 240 aa7.37□□□□□ -1.23
Notch1-201ENSMUST00000028288 VwfQ8CIZ8 2813 aa7.37□□□□□ -1.23
Notch1-201ENSMUST00000028288 Muc5acE9QAQ8 3455 aa7.35□□□□□ -1.23
Notch1-201ENSMUST00000028288 Zfhx4Q9JJN2 3550 aa7.31□□□□□ -1.24
Notch1-201ENSMUST00000028288 Megf8P60882 2789 aa7.3□□□□□ -1.24
Notch1-201ENSMUST00000028288 Gm20537G3UYK7 97 aa7.26□□□□□ -1.25
Notch1-201ENSMUST00000028288 Fbn1Q61554 2873 aaKnown RBP7.25□□□□□ -1.25
Notch1-201ENSMUST00000028288 Gm5965D3Z724 196 aa7.23□□□□□ -1.25
Notch1-201ENSMUST00000028288 Gm9112A2AI92 75 aa7.22□□□□□ -1.25
Notch1-201ENSMUST00000028288 Gm40193A0A1B0GT39 78 aa7.22□□□□□ -1.25
Notch1-201ENSMUST00000028288 Tnp1P10856 55 aa7.2□□□□□ -1.26
Notch1-201ENSMUST00000028288 2310057N15RikQ9D6T8 200 aa7.16□□□□□ -1.26
Notch1-201ENSMUST00000028288 Col7a1Q63870 2944 aa7.15□□□□□ -1.26
Notch1-201ENSMUST00000028288 Tenm2Q9WTS5 2764 aa7.12□□□□□ -1.27
Notch1-201ENSMUST00000028288 Csmd2V9GX34 3611 aa7.09□□□□□ -1.27
Notch1-201ENSMUST00000028288 B930094E09RikQ8C4T2 136 aa7.06□□□□□ -1.28
Notch1-201ENSMUST00000028288 2310079G19RikQ9D6L6 185 aa7.03□□□□□ -1.28
Notch1-201ENSMUST00000028288 A930033H14RikG5E8X6 103 aa7□□□□□ -1.29
Notch1-201ENSMUST00000028288 Svep1A2AVA0 3567 aa6.95□□□□□ -1.3
Notch1-201ENSMUST00000028288 Gm17416Q30KP4 66 aa6.78□□□□□ -1.32
Notch1-201ENSMUST00000028288 Muc6Q80T03 2850 aa6.78□□□□□ -1.32
Notch1-201ENSMUST00000028288 LystP97412 3788 aa6.77□□□□□ -1.33
Notch1-201ENSMUST00000028288 Gm9736A0A1W2P7N1 277 aa6.76□□□□□ -1.33
Notch1-201ENSMUST00000028288 Prm2P07978 107 aa6.75□□□□□ -1.33
Notch1-201ENSMUST00000028288 Xirp2Q4U4S6 3784 aa6.73□□□□□ -1.33
Notch1-201ENSMUST00000028288 Muc4Q8JZM8 3443 aa6.67□□□□□ -1.34
Notch1-201ENSMUST00000028288 BsnO88737 3942 aa6.67□□□□□ -1.34
Notch1-201ENSMUST00000028288 2210017I01RikA0A0A6YVV1 95 aa6.65□□□□□ -1.34
Notch1-201ENSMUST00000028288 Gm17402F6Z0L5 76 aa6.64□□□□□ -1.35
Notch1-201ENSMUST00000028288 Csmd3Q80T79 3707 aa6.55□□□□□ -1.36
Notch1-201ENSMUST00000028288 Gm9918Q8BUR5 174 aa6.53□□□□□ -1.36
Notch1-201ENSMUST00000028288 Hspg2Q05793 3707 aaKnown RBP6.51□□□□□ -1.37
Notch1-201ENSMUST00000028288 Gm10318A0A1W2P728 225 aa6.44□□□□□ -1.38
Notch1-201ENSMUST00000028288 Gm19668J3QMD1 248 aa6.44□□□□□ -1.38
Notch1-201ENSMUST00000028288 CubnQ9JLB4 3623 aa6.43□□□□□ -1.38
Notch1-201ENSMUST00000028288 Gm11939A2A592 99 aa6.41□□□□□ -1.38
Notch1-201ENSMUST00000028288 Krtap13-1Q8K198 168 aa6.34□□□□□ -1.4
Notch1-201ENSMUST00000028288 Crct1Q6PAI5 102 aa6.31□□□□□ -1.4
Notch1-201ENSMUST00000028288 Krtap19-5O08632 62 aa6.29□□□□□ -1.4
Notch1-201ENSMUST00000028288 4933428G20RikQ9D3X4 101 aa6.27□□□□□ -1.41
Notch1-201ENSMUST00000028288 Dnah3Q8BW94 4083 aa6.23□□□□□ -1.41
Notch1-201ENSMUST00000028288 Krtap3-2Q9D638 99 aa6.22□□□□□ -1.41
Notch1-201ENSMUST00000028288 Krtap3-3Q9D7P0 99 aa6.22□□□□□ -1.41
Notch1-201ENSMUST00000028288 Krtap3-1A2A591 98 aa6.21□□□□□ -1.42
Notch1-201ENSMUST00000028288 Dnah7bL7N1Y0 4068 aa6.13□□□□□ -1.43
Notch1-201ENSMUST00000028288 Kmt2aP55200 3966 aa5.98□□□□□ -1.45
Notch1-201ENSMUST00000028288 Vps13bQ80TY5 3993 aa5.9□□□□□ -1.46
Notch1-201ENSMUST00000028288 PrkdcP97313 4128 aa5.87□□□□□ -1.47
Notch1-201ENSMUST00000028288 Huwe1Q7TMY8 4377 aaKnown RBP5.86□□□□□ -1.47
Notch1-201ENSMUST00000028288 Gm6358A0A087WPH4 74 aa5.84□□□□□ -1.47
Notch1-201ENSMUST00000028288 Krtap1-5A2A590 122 aa5.83□□□□□ -1.48
Notch1-201ENSMUST00000028288 TnxbO35452 4006 aa5.82□□□□□ -1.48
Notch1-201ENSMUST00000028288 Dnah7cA0A087WR13 4024 aa5.82□□□□□ -1.48
Notch1-201ENSMUST00000028288 Krtap7-1Q9D3I6 87 aa5.79□□□□□ -1.48
Notch1-201ENSMUST00000028288 Sprr2a3Q4KL71 83 aa5.78□□□□□ -1.48
Notch1-201ENSMUST00000028288 Sprr2a1Q9CQK8 83 aa5.78□□□□□ -1.48
Notch1-201ENSMUST00000028288 Krtap19-9aF8WH65 55 aa5.77□□□□□ -1.49
Notch1-201ENSMUST00000028288 Dnah7aE9Q0T8 4024 aa5.77□□□□□ -1.49
Notch1-201ENSMUST00000028288 Dnah6E9Q0B6 4144 aa5.76□□□□□ -1.49
Notch1-201ENSMUST00000028288 Krtap1-4Q3V2D6 188 aa5.62□□□□□ -1.51
Notch1-201ENSMUST00000028288 Krtap8-1O08633 61 aa5.6□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 95.5 ms