RNA–Protein interactions for RNA: ENSMUST00000027438.7

Ncl-201, Transcript of Nucleolin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncl, Length 8,202 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncl-201ENSMUST00000027438 Smg1Q8BKX6 3658 aaKnown RBP3.75□□□□□ -1.81
Ncl-201ENSMUST00000027438 Muc4Q8JZM8 3443 aa3.75□□□□□ -1.81
Ncl-201ENSMUST00000027438 Krtap14O08640 167 aa3.75□□□□□ -1.81
Ncl-201ENSMUST00000027438 Myo15bI7HPW8 3033 aa3.75□□□□□ -1.81
Ncl-201ENSMUST00000027438 NipblQ6KCD5 2798 aaKnown RBP3.74□□□□□ -1.81
Ncl-201ENSMUST00000027438 Sprr2gO70558 76 aa3.74□□□□□ -1.81
Ncl-201ENSMUST00000027438 A730071L15RikQ8C4X0 137 aa3.74□□□□□ -1.81
Ncl-201ENSMUST00000027438 KalrnA2CG49 2964 aa3.72□□□□□ -1.81
Ncl-201ENSMUST00000027438 Csmd1Q923L3 3564 aa3.72□□□□□ -1.81
Ncl-201ENSMUST00000027438 FryE9Q8I9 3020 aa3.71□□□□□ -1.82
Ncl-201ENSMUST00000027438 Itpr1P11881 2749 aa3.7□□□□□ -1.82
Ncl-201ENSMUST00000027438 Cmya5Q70KF4 3739 aa3.69□□□□□ -1.82
Ncl-201ENSMUST00000027438 Chd6A3KFM7 2711 aa3.69□□□□□ -1.82
Ncl-201ENSMUST00000027438 Lama5Q61001 3718 aa3.69□□□□□ -1.82
Ncl-201ENSMUST00000027438 Svep1A2AVA0 3567 aa3.68□□□□□ -1.82
Ncl-201ENSMUST00000027438 Gm6358A0A087WPH4 74 aa3.66□□□□□ -1.82
Ncl-201ENSMUST00000027438 1700042G07RikB1AUF7 90 aa3.66□□□□□ -1.82
Ncl-201ENSMUST00000027438 Gm20537G3UYK7 97 aa3.65□□□□□ -1.82
Ncl-201ENSMUST00000027438 2210017I01RikA0A0A6YVV1 95 aa3.64□□□□□ -1.83
Ncl-201ENSMUST00000027438 Stab2Q8R4U0 2559 aa3.64□□□□□ -1.83
Ncl-201ENSMUST00000027438 Gm40193A0A1B0GT39 78 aa3.64□□□□□ -1.83
Ncl-201ENSMUST00000027438 Wdfy4E9Q2M9 3149 aa3.62□□□□□ -1.83
Ncl-201ENSMUST00000027438 Ubr5Q80TP3 2792 aa3.62□□□□□ -1.83
Ncl-201ENSMUST00000027438 Cystm1Q8K353 104 aa3.61□□□□□ -1.83
Ncl-201ENSMUST00000027438 Nbeal2Q6ZQA0 2742 aa3.6□□□□□ -1.83
Ncl-201ENSMUST00000027438 Adgrg4B7ZCC9 3073 aa3.6□□□□□ -1.83
Ncl-201ENSMUST00000027438 DspE9Q557 2883 aaKnown RBP3.6□□□□□ -1.83
Ncl-201ENSMUST00000027438 Gm3646F6S692 53 aa3.59□□□□□ -1.83
Ncl-201ENSMUST00000027438 Gm11565A2A4M7 156 aa3.58□□□□□ -1.84
Ncl-201ENSMUST00000027438 Utp20Q5XG71 2788 aaKnown RBP3.57□□□□□ -1.84
Ncl-201ENSMUST00000027438 Muc2Q80Z19 2680 aa3.56□□□□□ -1.84
Ncl-201ENSMUST00000027438 B930094E09RikQ8C4T2 136 aa3.56□□□□□ -1.84
Ncl-201ENSMUST00000027438 Col6a5A6H584 2640 aa3.55□□□□□ -1.84
Ncl-201ENSMUST00000027438 Dmxl2Q8BPN8 3032 aa3.55□□□□□ -1.84
Ncl-201ENSMUST00000027438 NbeaQ9EPN1 2936 aa3.54□□□□□ -1.84
Ncl-201ENSMUST00000027438 Itpr2Q9Z329 2701 aa3.53□□□□□ -1.84
Ncl-201ENSMUST00000027438 Gm10318A0A1W2P728 225 aa3.53□□□□□ -1.84
Ncl-201ENSMUST00000027438 Hspg2Q05793 3707 aaKnown RBP3.53□□□□□ -1.84
Ncl-201ENSMUST00000027438 ApcQ61315 2845 aa3.52□□□□□ -1.85
Ncl-201ENSMUST00000027438 Pkd1l1Q8R526 2615 aa3.51□□□□□ -1.85
Ncl-201ENSMUST00000027438 2310061N02RikQ9D6S9 174 aa3.5□□□□□ -1.85
Ncl-201ENSMUST00000027438 FcgbpE9Q0B5 2583 aa3.49□□□□□ -1.85
Ncl-201ENSMUST00000027438 Gm18596A0A1W2P860 280 aa3.48□□□□□ -1.85
Ncl-201ENSMUST00000027438 Zzef1Q5SSH7 2924 aa3.48□□□□□ -1.85
Ncl-201ENSMUST00000027438 2310046K23RikA0A0A6YVW6 87 aa3.48□□□□□ -1.85
Ncl-201ENSMUST00000027438 Gm9736A0A1W2P7N1 277 aa3.45□□□□□ -1.86
Ncl-201ENSMUST00000027438 Crct1Q6PAI5 102 aa3.45□□□□□ -1.86
Ncl-201ENSMUST00000027438 Gm19402J3QJV4 266 aa3.45□□□□□ -1.86
Ncl-201ENSMUST00000027438 Igfn1Q3KNY0 2849 aa3.44□□□□□ -1.86
Ncl-201ENSMUST00000027438 Krtap8-1O08633 61 aa3.44□□□□□ -1.86
Ncl-201ENSMUST00000027438 Trank1Q8BV79 2999 aa3.43□□□□□ -1.86
Ncl-201ENSMUST00000027438 Tex15F8VPN2 2785 aa3.43□□□□□ -1.86
Ncl-201ENSMUST00000027438 Gm19668J3QMD1 248 aa3.43□□□□□ -1.86
Ncl-201ENSMUST00000027438 Hivep1Q03172 2688 aa3.43□□□□□ -1.86
Ncl-201ENSMUST00000027438 Celsr2Q9R0M0 2920 aa3.43□□□□□ -1.86
Ncl-201ENSMUST00000027438 Srrm2Q8BTI8 2703 aaKnown RBP3.4□□□□□ -1.87
Ncl-201ENSMUST00000027438 Chd9Q8BYH8 2885 aa3.4□□□□□ -1.87
Ncl-201ENSMUST00000027438 2310079G19RikQ9D6L6 185 aa3.39□□□□□ -1.87
Ncl-201ENSMUST00000027438 CubnQ9JLB4 3623 aa3.38□□□□□ -1.87
Ncl-201ENSMUST00000027438 LystP97412 3788 aa3.38□□□□□ -1.87
Ncl-201ENSMUST00000027438 FlncQ8VHX6 2726 aaKnown RBP3.36□□□□□ -1.87
Ncl-201ENSMUST00000027438 LrbaQ9ESE1 2856 aa3.36□□□□□ -1.87
Ncl-201ENSMUST00000027438 TgO08710 2766 aa3.35□□□□□ -1.87
Ncl-201ENSMUST00000027438 Sprr2fO70557 76 aa3.34□□□□□ -1.87
Ncl-201ENSMUST00000027438 Nf1Q04690 2841 aa3.33□□□□□ -1.88
Ncl-201ENSMUST00000027438 Pdzd2E9Q1M1 2796 aa3.32□□□□□ -1.88
Ncl-201ENSMUST00000027438 SmcpP15265 143 aa3.31□□□□□ -1.88
Ncl-201ENSMUST00000027438 Csmd3Q80T79 3707 aa3.3□□□□□ -1.88
Ncl-201ENSMUST00000027438 Tenm1Q9WTS4 2731 aa3.28□□□□□ -1.88
Ncl-201ENSMUST00000027438 Megf8P60882 2789 aa3.27□□□□□ -1.89
Ncl-201ENSMUST00000027438 Tenm4Q3UHK6 2771 aa3.26□□□□□ -1.89
Ncl-201ENSMUST00000027438 Ank2Q8C8R3 3898 aa3.25□□□□□ -1.89
Ncl-201ENSMUST00000027438 Tenm3Q9WTS6 2715 aa3.24□□□□□ -1.89
Ncl-201ENSMUST00000027438 Xirp2Q4U4S6 3784 aa3.24□□□□□ -1.89
Ncl-201ENSMUST00000027438 OtogO55225 2910 aa3.23□□□□□ -1.89
Ncl-201ENSMUST00000027438 Helz2E9QAM5 2947 aaKnown RBP3.23□□□□□ -1.89
Ncl-201ENSMUST00000027438 Gm17402F6Z0L5 76 aa3.22□□□□□ -1.89
Ncl-201ENSMUST00000027438 Gm17416Q30KP4 66 aa3.22□□□□□ -1.89
Ncl-201ENSMUST00000027438 Krtap7-1Q9D3I6 87 aa3.11□□□□□ -1.91
Ncl-201ENSMUST00000027438 Sprr2iO70560 76 aa3.1□□□□□ -1.91
Ncl-201ENSMUST00000027438 Krtap13-1Q8K198 168 aa3.06□□□□□ -1.92
Ncl-201ENSMUST00000027438 Lce3bQ9CQM7 98 aa3.06□□□□□ -1.92
Ncl-201ENSMUST00000027438 Tenm2Q9WTS5 2764 aa3.06□□□□□ -1.92
Ncl-201ENSMUST00000027438 BsnO88737 3942 aa3.04□□□□□ -1.92
Ncl-201ENSMUST00000027438 VwfQ8CIZ8 2813 aa3.04□□□□□ -1.92
Ncl-201ENSMUST00000027438 Krtap19-5O08632 62 aa3.04□□□□□ -1.92
Ncl-201ENSMUST00000027438 Fbn1Q61554 2873 aaKnown RBP3.02□□□□□ -1.93
Ncl-201ENSMUST00000027438 Col7a1Q63870 2944 aa3.01□□□□□ -1.93
Ncl-201ENSMUST00000027438 Gm38119A0A0A6YX29 146 aa2.99□□□□□ -1.93
Ncl-201ENSMUST00000027438 LorP18165 486 aa2.99□□□□□ -1.93
Ncl-201ENSMUST00000027438 Krtap19-9aF8WH65 55 aa2.98□□□□□ -1.93
Ncl-201ENSMUST00000027438 Lce3cQ91V05 98 aa2.98□□□□□ -1.93
Ncl-201ENSMUST00000027438 Krtap31-2Q8CAY5 177 aa2.94□□□□□ -1.94
Ncl-201ENSMUST00000027438 Krtap19-3Q925H6 87 aa2.9□□□□□ -1.95
Ncl-201ENSMUST00000027438 Lce1jD3YUU5 139 aa2.89□□□□□ -1.95
Ncl-201ENSMUST00000027438 Lce1gQ9D195 139 aa2.89□□□□□ -1.95
Ncl-201ENSMUST00000027438 Lce1iQ9D6P5 149 aa2.89□□□□□ -1.95
Ncl-201ENSMUST00000027438 Lce1hQ9D6R3 140 aa2.89□□□□□ -1.95
Ncl-201ENSMUST00000027438 Sprr2eO70556 76 aa2.88□□□□□ -1.95
Ncl-201ENSMUST00000027438 Lce3dE9Q8V1 98 aa2.86□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 76.9 ms