RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Q8BGJ3 129 aa11.21□□□□□ -0.62
Ubp1-201ENSMUST00000009885 Gm9821Q8K076 103 aa11.2□□□□□ -0.62
Ubp1-201ENSMUST00000009885 2310061N02RikQ9D6S9 174 aa11.17□□□□□ -0.62
Ubp1-201ENSMUST00000009885 Cypt15B1AXS0 87 aa11.16□□□□□ -0.62
Ubp1-201ENSMUST00000009885 Megf8P60882 2789 aa11.14□□□□□ -0.63
Ubp1-201ENSMUST00000009885 OxtP35454 125 aa11.13□□□□□ -0.63
Ubp1-201ENSMUST00000009885 Cypt14J3QPF7 87 aa11.1□□□□□ -0.63
Ubp1-201ENSMUST00000009885 Muc6Q80T03 2850 aa11.1□□□□□ -0.63
Ubp1-201ENSMUST00000009885 Gm16253D3Z167 63 aa11.08□□□□□ -0.64
Ubp1-201ENSMUST00000009885 2310034C09RikQ9D746 214 aa11.07□□□□□ -0.64
Ubp1-201ENSMUST00000009885 Gpr15lA0A0B4J1N3 78 aa11.06□□□□□ -0.64
Ubp1-201ENSMUST00000009885 Tenm2Q9WTS5 2764 aa11.06□□□□□ -0.64
Ubp1-201ENSMUST00000009885 Dnah7bL7N1Y0 4068 aa11.01□□□□□ -0.65
Ubp1-201ENSMUST00000009885 Gm10065F6TJM2 114 aa11□□□□□ -0.65
Ubp1-201ENSMUST00000009885 Defb10Q8R2I8 73 aa10.99□□□□□ -0.65
Ubp1-201ENSMUST00000009885 NbdyA0A0N4SUI7 68 aa10.97□□□□□ -0.65
Ubp1-201ENSMUST00000009885 Krtap13O88375 197 aa10.93□□□□□ -0.66
Ubp1-201ENSMUST00000009885 Gm9507D3Z5T3 223 aa10.9□□□□□ -0.66
Ubp1-201ENSMUST00000009885 Dnah10D3YYQ8 4591 aa10.89□□□□□ -0.67
Ubp1-201ENSMUST00000009885 Ly6g6cQ9Z1Q4 126 aa10.88□□□□□ -0.67
Ubp1-201ENSMUST00000009885 AW011738F6S7Q2 159 aa10.86□□□□□ -0.67
Ubp1-201ENSMUST00000009885 Gm17349F7BGH6 99 aa10.86□□□□□ -0.67
Ubp1-201ENSMUST00000009885 Krtap29-1A2A5X4 342 aa10.86□□□□□ -0.67
Ubp1-201ENSMUST00000009885 Dnah14A0A140LIJ4 4489 aa10.84□□□□□ -0.67
Ubp1-201ENSMUST00000009885 Gm12216A0A1W2P827 62 aa10.83□□□□□ -0.68
Ubp1-201ENSMUST00000009885 4930507D05RikQ8C9C9 103 aa10.82□□□□□ -0.68
Ubp1-201ENSMUST00000009885 2310050C09RikG5E8Z3 280 aa10.8□□□□□ -0.68
Ubp1-201ENSMUST00000009885 Krtap14O08640 167 aa10.78□□□□□ -0.68
Ubp1-201ENSMUST00000009885 Krtap10-4Q08EG8 221 aa10.75□□□□□ -0.69
Ubp1-201ENSMUST00000009885 Gm3880A0A1B0GSB3 72 aa10.74□□□□□ -0.69
Ubp1-201ENSMUST00000009885 FcgbpE9Q0B5 2583 aa10.7□□□□□ -0.7
Ubp1-201ENSMUST00000009885 Dnah11E9Q7N9 4488 aa10.7□□□□□ -0.7
Ubp1-201ENSMUST00000009885 CriptO70333 101 aa10.64□□□□□ -0.71
Ubp1-201ENSMUST00000009885 Kmt2aP55200 3966 aa10.61□□□□□ -0.71
Ubp1-201ENSMUST00000009885 Tnp2P11378 117 aa10.61□□□□□ -0.71
Ubp1-201ENSMUST00000009885 Dnah3Q8BW94 4083 aa10.58□□□□□ -0.72
Ubp1-201ENSMUST00000009885 Gm4491E0CX42 125 aa10.58□□□□□ -0.72
Ubp1-201ENSMUST00000009885 2310079G19RikQ9D6L6 185 aa10.49□□□□□ -0.73
Ubp1-201ENSMUST00000009885 Dnah17Q69Z23 4481 aa10.48□□□□□ -0.73
Ubp1-201ENSMUST00000009885 RetnlbQ99P86 105 aa10.47□□□□□ -0.73
Ubp1-201ENSMUST00000009885 Pla2g10Q9QXX3 151 aa10.47□□□□□ -0.73
Ubp1-201ENSMUST00000009885 Krtap10-10A0A1W2P7T6 217 aa10.46□□□□□ -0.73
Ubp1-201ENSMUST00000009885 Dnah9B1AR51 4484 aa10.46□□□□□ -0.74
Ubp1-201ENSMUST00000009885 D6Ertd527eA0A0N4SWI3 464 aa10.46□□□□□ -0.74
Ubp1-201ENSMUST00000009885 Mp68P56379 58 aa10.4□□□□□ -0.74
Ubp1-201ENSMUST00000009885 Dnah1E9Q8T7 4250 aa10.34□□□□□ -0.75
Ubp1-201ENSMUST00000009885 Gm20537G3UYK7 97 aa10.32□□□□□ -0.76
Ubp1-201ENSMUST00000009885 Dnah5Q8VHE6 4621 aa10.29□□□□□ -0.76
Ubp1-201ENSMUST00000009885 Gm17606F6ZL36 78 aa10.28□□□□□ -0.76
Ubp1-201ENSMUST00000009885 Huwe1Q7TMY8 4377 aaKnown RBP10.26□□□□□ -0.77
Ubp1-201ENSMUST00000009885 Dnah6E9Q0B6 4144 aa10.25□□□□□ -0.77
Ubp1-201ENSMUST00000009885 Gm2696A0A1W2P709 240 aa10.24□□□□□ -0.77
Ubp1-201ENSMUST00000009885 Gm9918Q8BUR5 174 aa10.21□□□□□ -0.77
Ubp1-201ENSMUST00000009885 Gm20538F6Z9R1 75 aa10.19□□□□□ -0.78
Ubp1-201ENSMUST00000009885 A930033H14RikG5E8X6 103 aa10.19□□□□□ -0.78
Ubp1-201ENSMUST00000009885 Cox6b2Q80ZN9 88 aa10.19□□□□□ -0.78
Ubp1-201ENSMUST00000009885 Defb11Q8R2I7 77 aa10.19□□□□□ -0.78
Ubp1-201ENSMUST00000009885 Romo1P60603 79 aa10.18□□□□□ -0.78
Ubp1-201ENSMUST00000009885 Rnase13Q5GAM7 153 aa10.17□□□□□ -0.78
Ubp1-201ENSMUST00000009885 Krtap3-2Q9D638 99 aa10.15□□□□□ -0.78
Ubp1-201ENSMUST00000009885 Krtap3-3Q9D7P0 99 aa10.15□□□□□ -0.78
Ubp1-201ENSMUST00000009885 Gm9955Q8CEJ8 102 aa10.15□□□□□ -0.78
Ubp1-201ENSMUST00000009885 PlecQ9QXS1 4691 aaKnown RBP10.09□□□□□ -0.79
Ubp1-201ENSMUST00000009885 Gm10382Q3V0T5 144 aa10.06□□□□□ -0.8
Ubp1-201ENSMUST00000009885 Dnah7cA0A087WR13 4024 aa10.06□□□□□ -0.8
Ubp1-201ENSMUST00000009885 PrkdcP97313 4128 aa10.03□□□□□ -0.8
Ubp1-201ENSMUST00000009885 Rpl37Q9D823 97 aa9.98□□□□□ -0.81
Ubp1-201ENSMUST00000009885 Hectd4E9Q2E4 4418 aa9.96□□□□□ -0.82
Ubp1-201ENSMUST00000009885 Stard9Q80TF6 4561 aa9.94□□□□□ -0.82
Ubp1-201ENSMUST00000009885 Lrp1bQ9JI18 4599 aa9.92□□□□□ -0.82
Ubp1-201ENSMUST00000009885 Krtap15-1Q9QZU5 150 aa9.86□□□□□ -0.83
Ubp1-201ENSMUST00000009885 Gm11939A2A592 99 aa9.85□□□□□ -0.83
Ubp1-201ENSMUST00000009885 Gm5767A0A0J9YTU8 78 aa9.83□□□□□ -0.84
Ubp1-201ENSMUST00000009885 Fras1Q80T14 4010 aa9.81□□□□□ -0.84
Ubp1-201ENSMUST00000009885 Dnah7aE9Q0T8 4024 aa9.79□□□□□ -0.84
Ubp1-201ENSMUST00000009885 Rps29P62274 56 aa9.76□□□□□ -0.85
Ubp1-201ENSMUST00000009885 Dync2h1Q45VK7 4306 aa9.72□□□□□ -0.85
Ubp1-201ENSMUST00000009885 Vps13dB1ART2 4390 aa9.69□□□□□ -0.86
Ubp1-201ENSMUST00000009885 Ndufaf8A2AMZ4 74 aa9.65□□□□□ -0.87
Ubp1-201ENSMUST00000009885 Dnah2P0C6F1 4456 aa9.64□□□□□ -0.87
Ubp1-201ENSMUST00000009885 TnxbO35452 4006 aa9.64□□□□□ -0.87
Ubp1-201ENSMUST00000009885 ApobE9Q414 4505 aa9.64□□□□□ -0.87
Ubp1-201ENSMUST00000009885 Vps13bQ80TY5 3993 aa9.63□□□□□ -0.87
Ubp1-201ENSMUST00000009885 Gm21887J3QQ04 176 aa9.63□□□□□ -0.87
Ubp1-201ENSMUST00000009885 Gm5965D3Z724 196 aa9.57□□□□□ -0.88
Ubp1-201ENSMUST00000009885 Gm19426M0QWC7 77 aa9.55□□□□□ -0.88
Ubp1-201ENSMUST00000009885 Pkd1O08852 4293 aa9.53□□□□□ -0.88
Ubp1-201ENSMUST00000009885 Gm9736A0A1W2P7N1 277 aa9.53□□□□□ -0.88
Ubp1-201ENSMUST00000009885 Prm2P07978 107 aa9.48□□□□□ -0.89
Ubp1-201ENSMUST00000009885 Lrp1Q91ZX7 4545 aaKnown RBP9.42□□□□□ -0.9
Ubp1-201ENSMUST00000009885 SacsQ9JLC8 4582 aa9.37□□□□□ -0.91
Ubp1-201ENSMUST00000009885 BC029722A0A0N4SW31 51 aa9.29□□□□□ -0.92
Ubp1-201ENSMUST00000009885 Dync1h1Q9JHU4 4644 aaKnown RBP9.29□□□□□ -0.92
Ubp1-201ENSMUST00000009885 B930094E09RikQ8C4T2 136 aa9.28□□□□□ -0.92
Ubp1-201ENSMUST00000009885 Fat2Q5F226 4351 aa9.25□□□□□ -0.93
Ubp1-201ENSMUST00000009885 Krtap3-1A2A591 98 aa9.25□□□□□ -0.93
Ubp1-201ENSMUST00000009885 Fam229aB2KGE5 128 aa9.19□□□□□ -0.94
Ubp1-201ENSMUST00000009885 Pkhd1E9PZ36 4059 aa9.19□□□□□ -0.94
Ubp1-201ENSMUST00000009885 2310057N15RikQ9D6T8 200 aa9.17□□□□□ -0.94
Ubp1-201ENSMUST00000009885 Fat1A0A1L1SQU7 4645 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 67.6 ms