RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 AY074887Q8R5F9 132 aa6.3□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Ighv2-2A0A075B5P8 116 aa6.3□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm10770F7D043 238 aa6.3□□□□□ -1.4
Ldlr-202ENSMUST00000213114 P01821 116 aa6.3□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Dmac1Q9CQ00 111 aa6.3□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Sprr4Q8CGN8 76 aa6.29□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm10308Q9CVR5 141 aa6.29□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Itpr2Q9Z329 2701 aa6.29□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm28230A0A0A0MQ91 144 aa6.29□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Reg3aO09037 175 aa6.29□□□□□ -1.4
Ldlr-202ENSMUST00000213114 1810062G17RikG3X8Y2 129 aa6.29□□□□□ -1.4
Ldlr-202ENSMUST00000213114 1700018G05RikA0A1B0GSI2 66 aa6.28□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Mrpl34Q99N91 92 aa6.28□□□□□ -1.4
Ldlr-202ENSMUST00000213114 AplnQ9R0R4 77 aa6.28□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm10837Q3UTT8 145 aa6.28□□□□□ -1.4
Ldlr-202ENSMUST00000213114 C130032M10RikQ8C888 123 aa6.27□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Wfdc17Q5SSJ1 76 aa6.27□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Fam168bQ80XQ8 194 aa6.27□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Gm44790A0A0N4SV91 103 aa6.27□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Gm17689B3GLJ4 109 aa6.27□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Bean1Q9EQG5 255 aa6.27□□□□□ -1.41
Ldlr-202ENSMUST00000213114 LystP97412 3788 aa6.26□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Defb39Q70KL3 74 aa6.26□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Gm10642Q3TWM1 71 aa6.26□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Gm21886J3QJU9 214 aa6.26□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Igkv3-7A0A0G2JE31 119 aa6.25□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Cdc42se1Q8BHL7 80 aa6.24□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Phf5aP83870 110 aaKnown RBP6.24□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Gm10160F6Y577 67 aa6.23□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Csmd1Q923L3 3564 aa6.23□□□□□ -1.41
Ldlr-202ENSMUST00000213114 AI606181Q8C7B9 129 aa6.23□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Igkv8-28A0A0G2JE47 121 aa6.22□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Smg1Q8BKX6 3658 aaKnown RBP6.21□□□□□ -1.41
Ldlr-202ENSMUST00000213114 Prol1E9PYQ4 312 aa6.21□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Znf414Q9DCK4 299 aa6.21□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Gm11213A0A1B0GR83 88 aa6.21□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Gm5617Q91VN2 117 aa6.2□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Tenm3Q9WTS6 2715 aa6.18□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Coa5Q99M07 74 aa6.17□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Igkv8-19A0A0G2JFN8 121 aa6.17□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Q8BT88 171 aa6.17□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Helz2E9QAM5 2947 aaKnown RBP6.17□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Chchd10Q7TNL9 138 aa6.17□□□□□ -1.42
Ldlr-202ENSMUST00000213114 CnbpP53996 178 aaKnown RBP6.16□□□□□ -1.42
Ldlr-202ENSMUST00000213114 A330070K13RikQ8CA53 115 aa6.16□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Smim29Q8R043 75 aa6.16□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Pdzd2E9Q1M1 2796 aa6.15□□□□□ -1.42
Ldlr-202ENSMUST00000213114 Gm10320E9PW43 113 aa6.15□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Rpl37aP61514 92 aa6.14□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Phxr5P08399 672 aa6.14□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Limd2Q8BGB5 128 aa6.14□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Plac8Q9JI48 112 aa6.14□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Gm36176A0A1W2P8D5 158 aa6.13□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Lama5Q61001 3718 aa6.13□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Phxr4P15974 95 aa6.13□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Fam229bQ8CF36 80 aa6.13□□□□□ -1.43
Ldlr-202ENSMUST00000213114 A930002H24RikQ8C8Y3 163 aa6.12□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Gm20661K7N787 53 aa6.12□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Gm7276Q3TYW4 209 aa6.12□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Tenm4Q3UHK6 2771 aa6.11□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Spaca4Q80ZQ0 127 aa6.1□□□□□ -1.43
Ldlr-202ENSMUST00000213114 RetnlbQ99P86 105 aa6.1□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Gpr15lA0A0B4J1N3 78 aa6.09□□□□□ -1.43
Ldlr-202ENSMUST00000213114 Gm27235Q3UW50 83 aa6.08□□□□□ -1.44
Ldlr-202ENSMUST00000213114 Cmya5Q70KF4 3739 aa6.07□□□□□ -1.44
Ldlr-202ENSMUST00000213114 Gm10643Q3URG9 111 aa6.07□□□□□ -1.44
Ldlr-202ENSMUST00000213114 AW011738F6S7Q2 159 aa6.06□□□□□ -1.44
Ldlr-202ENSMUST00000213114 Defb9Q8R2I6 67 aa6.05□□□□□ -1.44
Ldlr-202ENSMUST00000213114 ApcQ61315 2845 aa6.05□□□□□ -1.44
Ldlr-202ENSMUST00000213114 Cystm1Q8K353 104 aa6.03□□□□□ -1.44
Ldlr-202ENSMUST00000213114 FcgbpE9Q0B5 2583 aa6.03□□□□□ -1.44
Ldlr-202ENSMUST00000213114 Srrm2Q8BTI8 2703 aaKnown RBP6.02□□□□□ -1.45
Ldlr-202ENSMUST00000213114 Anapc11Q9CPX9 84 aa6.02□□□□□ -1.45
Ldlr-202ENSMUST00000213114 Gm10999F6Q4M4 69 aa6.01□□□□□ -1.45
Ldlr-202ENSMUST00000213114 Fam104aA2A6P4 185 aa6□□□□□ -1.45
Ldlr-202ENSMUST00000213114 Zcchc13Q9D548 170 aa5.99□□□□□ -1.45
Ldlr-202ENSMUST00000213114 Gm17349F7BGH6 99 aa5.98□□□□□ -1.45
Ldlr-202ENSMUST00000213114 Gm9508A0A1W2P7W0 230 aa5.98□□□□□ -1.45
Ldlr-202ENSMUST00000213114 TgO08710 2766 aa5.97□□□□□ -1.45
Ldlr-202ENSMUST00000213114 Chtf8P0CG14 533 aa5.97□□□□□ -1.45
Ldlr-202ENSMUST00000213114 OtogO55225 2910 aa5.96□□□□□ -1.45
Ldlr-202ENSMUST00000213114 OxtP35454 125 aa5.96□□□□□ -1.46
Ldlr-202ENSMUST00000213114 A730071L15RikQ8C4X0 137 aa5.95□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Gm12216A0A1W2P827 62 aa5.95□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Svep1A2AVA0 3567 aa5.95□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Ank2Q8C8R3 3898 aa5.94□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Muc4Q8JZM8 3443 aa5.94□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Uqcr11Q9CPX8 56 aa5.94□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Defb1P56386 69 aa5.94□□□□□ -1.46
Ldlr-202ENSMUST00000213114 SmcpP15265 143 aa5.93□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Sprr1aQ62266 144 aa5.93□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Q8BGJ3 129 aa5.9□□□□□ -1.46
Ldlr-202ENSMUST00000213114 Cypt15B1AXS0 87 aa5.89□□□□□ -1.47
Ldlr-202ENSMUST00000213114 4930507D05RikQ8C9C9 103 aa5.88□□□□□ -1.47
Ldlr-202ENSMUST00000213114 Gm10065F6TJM2 114 aa5.86□□□□□ -1.47
Ldlr-202ENSMUST00000213114 Gm17606F6ZL36 78 aa5.86□□□□□ -1.47
Ldlr-202ENSMUST00000213114 6030445D17RikE9Q8F9 148 aa5.84□□□□□ -1.48
Ldlr-202ENSMUST00000213114 Mp68P56379 58 aa5.83□□□□□ -1.48
Ldlr-202ENSMUST00000213114 NbdyA0A0N4SUI7 68 aa5.83□□□□□ -1.48
Ldlr-202ENSMUST00000213114 Gm10139O88245 57 aa5.83□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms