RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Elof1P60003 83 aa11.02□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Cdc42se1Q8BHL7 80 aa11.02□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Gm9507D3Z5T3 223 aa11.01□□□□□ -0.65
Hoxc4-202ENSMUST00000165375 Gm11011D3Z3L9 86 aa11□□□□□ -0.65
Hoxc4-202ENSMUST00000165375 BC048502Q80Y74 154 aa11□□□□□ -0.65
Hoxc4-202ENSMUST00000165375 Gm9918Q8BUR5 174 aa10.99□□□□□ -0.65
Hoxc4-202ENSMUST00000165375 Sprr2jO70561 109 aa10.99□□□□□ -0.65
Hoxc4-202ENSMUST00000165375 Cd164Q9R0L9 197 aa10.96□□□□□ -0.65
Hoxc4-202ENSMUST00000165375 Coa6Q8BGD8 79 aa10.95□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Cox7b2Q9D2H1 82 aa10.95□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Sox16Q62247 57 aa10.94□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 AI606181Q8C7B9 129 aa10.94□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Prr15lQ8JZM2 100 aa10.93□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Ufsp1Q9CZP0 217 aa10.93□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Ly6g6cQ9Z1Q4 126 aa10.93□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Igkv4-92A0A0B4J1I2 117 aa10.93□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Gm7276Q3TYW4 209 aa10.93□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 A330070K13RikQ8CA53 115 aa10.93□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Fras1Q80T14 4010 aa10.92□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Sfta2E9PXB6 77 aa10.92□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 PlecQ9QXS1 4691 aaKnown RBP10.92□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Sec61gP60060 68 aa10.91□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 Igkv1-88A0A140T8N1 120 aa10.9□□□□□ -0.66
Hoxc4-202ENSMUST00000165375 A730009L09RikA0A1B0GS82 72 aa10.89□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Gm10197F6QEY5 67 aa10.89□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Sprr4Q8CGN8 76 aa10.89□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Cdk2ap2Q9CPY4 127 aa10.89□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Gm17577J3QNF7 156 aa10.88□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Igkv3-12A0A140T8P0 119 aa10.88□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Igkv3-10A0A0G2JGN0 119 aa10.87□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Camk2n2Q78WH7 79 aa10.87□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Defb37Q7TMD2 62 aa10.87□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 2310050C09RikG5E8Z3 280 aa10.86□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 OxtP35454 125 aa10.85□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Igkv3-2A0A075B5P0 119 aa10.84□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Trav14-1A0A0G2JF94 121 aa10.84□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Gm28374F6SG70 93 aa10.84□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Nupr2Q497P3 102 aa10.84□□□□□ -0.67
Hoxc4-202ENSMUST00000165375 Cox6a2P43023 97 aa10.81□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 Defb40Q70KL2 73 aa10.81□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 Igkv8-19A0A0G2JFN8 121 aa10.81□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 A0A286YCN5 57 aa10.8□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 Sprr1aQ62266 144 aa10.79□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 4933415A04RikQ9D443 101 aa10.79□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 C130032M10RikQ8C888 123 aa10.79□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 Coa5Q99M07 74 aa10.79□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 Igkv1-122A0A140T8M9 119 aa10.78□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 Atox1O08997 68 aaKnown RBP10.78□□□□□ -0.68
Hoxc4-202ENSMUST00000165375 Gm37013Q8K491 104 aa10.77□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 Mrpl34Q99N91 92 aa10.77□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 U90926O08546 118 aa10.76□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 Dnah11E9Q7N9 4488 aa10.74□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 Gm10837Q3UTT8 145 aa10.74□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 Igkv3-4A0A140T8Q4 119 aa10.73□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 Gm11627A6PWP4 55 aa10.73□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 Dnah9B1AR51 4484 aa10.72□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 A0A286YE02 88 aa10.72□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 Gm12353A2AGJ4 60 aa10.71□□□□□ -0.69
Hoxc4-202ENSMUST00000165375 Dnah7aE9Q0T8 4024 aa10.71□□□□□ -0.7
Hoxc4-202ENSMUST00000165375 Plac8Q9JI48 112 aa10.7□□□□□ -0.7
Hoxc4-202ENSMUST00000165375 PscaP57096 123 aa10.69□□□□□ -0.7
Hoxc4-202ENSMUST00000165375 Phxr4P15974 95 aa10.67□□□□□ -0.7
Hoxc4-202ENSMUST00000165375 Defb12Q8K4N3 78 aa10.67□□□□□ -0.7
Hoxc4-202ENSMUST00000165375 SycnQ8VCK7 134 aa10.66□□□□□ -0.7
Hoxc4-202ENSMUST00000165375 Gm44790A0A0N4SV91 103 aa10.66□□□□□ -0.7
Hoxc4-202ENSMUST00000165375 1700012A03RikQ9DAF1 130 aa10.64□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 Wfdc6bF6ULY1 148 aa10.64□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 Smim29Q8R043 75 aa10.62□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 Dmac1Q9CQ00 111 aa10.62□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 Obox2E9PXV9 151 aa10.61□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 Prol1E9PYQ4 312 aa10.6□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 Fam168bQ80XQ8 194 aa10.6□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 Gm10643Q3URG9 111 aa10.59□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 Dnah7cA0A087WR13 4024 aa10.59□□□□□ -0.71
Hoxc4-202ENSMUST00000165375 A0A286YE49 62 aa10.58□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Gm17521F6QAC8 156 aa10.58□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 TgO08710 2766 aa10.58□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Vpreb3D3Z6J4 130 aa10.58□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Gm10160F6Y577 67 aa10.58□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Ccdc179J3QM76 67 aa10.57□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Ube2bP63147 152 aa10.56□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Krtap10-4Q08EG8 221 aa10.56□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Zcchc13Q9D548 170 aa10.55□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 P84750 121 aa10.55□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Gm10065F6TJM2 114 aa10.54□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Vps13dB1ART2 4390 aa10.53□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Ube2aQ9Z255 152 aa10.53□□□□□ -0.72
Hoxc4-202ENSMUST00000165375 Gm21886J3QJU9 214 aa10.51□□□□□ -0.73
Hoxc4-202ENSMUST00000165375 1700074P13RikQ9D9G7 251 aa10.5□□□□□ -0.73
Hoxc4-202ENSMUST00000165375 1700018G05RikA0A1B0GSI2 66 aa10.47□□□□□ -0.73
Hoxc4-202ENSMUST00000165375 Krtap29-1A2A5X4 342 aa10.47□□□□□ -0.73
Hoxc4-202ENSMUST00000165375 1700042G07RikB1AUF7 90 aa10.46□□□□□ -0.74
Hoxc4-202ENSMUST00000165375 Dnah2P0C6F1 4456 aa10.46□□□□□ -0.74
Hoxc4-202ENSMUST00000165375 Wfdc3Q14AE4 130 aa10.45□□□□□ -0.74
Hoxc4-202ENSMUST00000165375 Fam104aA2A6P4 185 aa10.44□□□□□ -0.74
Hoxc4-202ENSMUST00000165375 Reg3aO09037 175 aa10.43□□□□□ -0.74
Hoxc4-202ENSMUST00000165375 Gm26620Q9CY65 116 aa10.43□□□□□ -0.74
Hoxc4-202ENSMUST00000165375 9230102O04RikA2ASX7 82 aa10.42□□□□□ -0.74
Hoxc4-202ENSMUST00000165375 Gm20604F8WIA3 75 aa10.42□□□□□ -0.74
Hoxc4-202ENSMUST00000165375 Phf5aP83870 110 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms