RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 CicQ924A2 2510 aa5.6□□□□□ -1.51
Col6a5-201ENSMUST00000165165 Gm9112A2AI92 75 aa5.59□□□□□ -1.51
Col6a5-201ENSMUST00000165165 NipblQ6KCD5 2798 aaKnown RBP5.59□□□□□ -1.51
Col6a5-201ENSMUST00000165165 Hectd1Q69ZR2 2618 aaKnown RBP5.59□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Bod1lE9Q6J5 3032 aa5.59□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Gm3233E9Q2H5 230 aa5.59□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Gm5767A0A0J9YTU8 78 aa5.58□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Gm16253D3Z167 63 aa5.57□□□□□ -1.52
Col6a5-201ENSMUST00000165165 CenpfE9Q3P4 2997 aaKnown RBP5.57□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Gm9508A0A1W2P7W0 230 aa5.56□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Gm42715A0A087WP63 3095 aaKnown RBP5.55□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Cox6b2Q80ZN9 88 aa5.55□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Gm7138L7N2C3 230 aa5.54□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Gm3238W4VSP7 230 aa5.54□□□□□ -1.52
Col6a5-201ENSMUST00000165165 Ranbp2Q9ERU9 3053 aaKnown RBP5.53□□□□□ -1.52
Col6a5-201ENSMUST00000165165 A730071L15RikQ8C4X0 137 aa5.52□□□□□ -1.53
Col6a5-201ENSMUST00000165165 Sprr1aQ62266 144 aa5.51□□□□□ -1.53
Col6a5-201ENSMUST00000165165 Bahcc1Q3UHR0 2643 aa5.51□□□□□ -1.53
Col6a5-201ENSMUST00000165165 BptfA2A654 3036 aaKnown RBP5.5□□□□□ -1.53
Col6a5-201ENSMUST00000165165 Tnp1P10856 55 aa5.47□□□□□ -1.53
Col6a5-201ENSMUST00000165165 Krtap29-1A2A5X4 342 aa5.47□□□□□ -1.53
Col6a5-201ENSMUST00000165165 Zfp292Q9Z2U2 2698 aa5.46□□□□□ -1.53
Col6a5-201ENSMUST00000165165 Unc79Q0KK59 2596 aa5.46□□□□□ -1.53
Col6a5-201ENSMUST00000165165 Gm21887J3QQ04 176 aa5.46□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Gm11565A2A4M7 156 aa5.45□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Cep350E9Q309 3095 aa5.45□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Prune2Q52KR3 3084 aa5.44□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Zfhx3Q61329 3726 aa5.44□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Stab1Q8R4Y4 2571 aa5.44□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Gm17349F7BGH6 99 aa5.44□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Map1aQ9QYR6 2776 aa5.43□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Gm7137J3QMW1 236 aa5.43□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Myo18bE9PV66 2605 aa5.42□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Gcn1E9PVA8 2671 aaKnown RBP5.42□□□□□ -1.54
Col6a5-201ENSMUST00000165165 Krtap14O08640 167 aa5.39□□□□□ -1.55
Col6a5-201ENSMUST00000165165 Akap13E9Q394 2776 aa5.38□□□□□ -1.55
Col6a5-201ENSMUST00000165165 FlnaQ8BTM8 2647 aaKnown RBP5.38□□□□□ -1.55
Col6a5-201ENSMUST00000165165 Ep400Q8CHI8 3072 aaKnown RBP5.37□□□□□ -1.55
Col6a5-201ENSMUST00000165165 Lama2Q60675 3118 aaKnown RBP5.37□□□□□ -1.55
Col6a5-201ENSMUST00000165165 Gm40193A0A1B0GT39 78 aa5.34□□□□□ -1.55
Col6a5-201ENSMUST00000165165 Krtap13O88375 197 aa5.34□□□□□ -1.55
Col6a5-201ENSMUST00000165165 Usp34Q6ZQ93 3582 aa5.34□□□□□ -1.55
Col6a5-201ENSMUST00000165165 9530053A07RikE9PVG8 2581 aa5.33□□□□□ -1.56
Col6a5-201ENSMUST00000165165 Celsr3Q91ZI0 3301 aa5.32□□□□□ -1.56
Col6a5-201ENSMUST00000165165 Lama3Q61789 3330 aa5.32□□□□□ -1.56
Col6a5-201ENSMUST00000165165 Gm2310J3QNJ2 377 aa5.32□□□□□ -1.56
Col6a5-201ENSMUST00000165165 Ash1lQ99MY8 2958 aa5.3□□□□□ -1.56
Col6a5-201ENSMUST00000165165 Tnrc18Q80WC3 2878 aa5.28□□□□□ -1.56
Col6a5-201ENSMUST00000165165 Unc80Q8BLN6 3261 aa5.27□□□□□ -1.57
Col6a5-201ENSMUST00000165165 ApcQ61315 2845 aa5.27□□□□□ -1.57
Col6a5-201ENSMUST00000165165 Lelp1Q9DAE3 120 aa5.27□□□□□ -1.57
Col6a5-201ENSMUST00000165165 Rps29P62274 56 aa5.25□□□□□ -1.57
Col6a5-201ENSMUST00000165165 SmcpP15265 143 aa5.24□□□□□ -1.57
Col6a5-201ENSMUST00000165165 AtrQ9JKK8 2635 aa5.23□□□□□ -1.57
Col6a5-201ENSMUST00000165165 FlnbQ80X90 2602 aaKnown RBP5.22□□□□□ -1.57
Col6a5-201ENSMUST00000165165 D6Ertd527eA0A0N4SWI3 464 aa5.2□□□□□ -1.58
Col6a5-201ENSMUST00000165165 Dmxl1Q6PNC0 3013 aa5.2□□□□□ -1.58
Col6a5-201ENSMUST00000165165 Lama1P19137 3084 aa5.2□□□□□ -1.58
Col6a5-201ENSMUST00000165165 Gm36176A0A1W2P8D5 158 aa5.2□□□□□ -1.58
Col6a5-201ENSMUST00000165165 DspE9Q557 2883 aaKnown RBP5.19□□□□□ -1.58
Col6a5-201ENSMUST00000165165 Cfap54Q8C6S9 3106 aa5.17□□□□□ -1.58
Col6a5-201ENSMUST00000165165 Chd6A3KFM7 2711 aa5.15□□□□□ -1.58
Col6a5-201ENSMUST00000165165 Igsf10Q3V1M1 2594 aa5.14□□□□□ -1.59
Col6a5-201ENSMUST00000165165 AtmQ62388 3066 aa5.14□□□□□ -1.59
Col6a5-201ENSMUST00000165165 Gm9507D3Z5T3 223 aa5.12□□□□□ -1.59
Col6a5-201ENSMUST00000165165 Prm2P07978 107 aa5.12□□□□□ -1.59
Col6a5-201ENSMUST00000165165 Wdfy4E9Q2M9 3149 aa5.12□□□□□ -1.59
Col6a5-201ENSMUST00000165165 Vps13aQ5H8C4 3166 aa5.1□□□□□ -1.59
Col6a5-201ENSMUST00000165165 HttP42859 3119 aa5.1□□□□□ -1.59
Col6a5-201ENSMUST00000165165 Gm5965D3Z724 196 aa5.09□□□□□ -1.59
Col6a5-201ENSMUST00000165165 Frem2Q6NVD0 3160 aa5.08□□□□□ -1.6
Col6a5-201ENSMUST00000165165 FryE9Q8I9 3020 aa5.08□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Chd7A2AJK6 2986 aaKnown RBP5.07□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Tep1P97499 2629 aa5.07□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Ubr5Q80TP3 2792 aa5.07□□□□□ -1.6
Col6a5-201ENSMUST00000165165 KalrnA2CG49 2964 aa5.06□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Gm20537G3UYK7 97 aa5.06□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Krtap10-4Q08EG8 221 aa5.05□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Dmxl2Q8BPN8 3032 aa5.05□□□□□ -1.6
Col6a5-201ENSMUST00000165165 2310057N15RikQ9D6T8 200 aa5.05□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Gm7173A0A0G2JEB6 3132 aa5.05□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Col12a1Q60847 3120 aa5.04□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Cdh23Q99PF4 3354 aa5.03□□□□□ -1.6
Col6a5-201ENSMUST00000165165 Tnp2P11378 117 aa5.02□□□□□ -1.61
Col6a5-201ENSMUST00000165165 B930094E09RikQ8C4T2 136 aa5.02□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Rev3lQ61493 3122 aa5.02□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Akap9Q70FJ1 3797 aa5.02□□□□□ -1.61
Col6a5-201ENSMUST00000165165 MgaA2AWL7 3003 aaKnown RBP5.02□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Utp20Q5XG71 2788 aaKnown RBP5.01□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Itpr3P70227 2670 aa5□□□□□ -1.61
Col6a5-201ENSMUST00000165165 TrioQ0KL02 3102 aa4.99□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Mast4Q811L6 2618 aa4.98□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Krtap10-10A0A1W2P7T6 217 aa4.98□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Brca2P97929 3329 aa4.98□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Myo15bI7HPW8 3033 aa4.97□□□□□ -1.61
Col6a5-201ENSMUST00000165165 Szt2A2A9C3 3431 aa4.96□□□□□ -1.62
Col6a5-201ENSMUST00000165165 Itpr2Q9Z329 2701 aa4.95□□□□□ -1.62
Col6a5-201ENSMUST00000165165 Stab2Q8R4U0 2559 aa4.94□□□□□ -1.62
Col6a5-201ENSMUST00000165165 Fbn2Q61555 2907 aa4.94□□□□□ -1.62
Col6a5-201ENSMUST00000165165 FcgbpE9Q0B5 2583 aa4.92□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 85 ms