RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Defb39Q70KL3 74 aa12.04□□□□□ -0.48
Lig3-204ENSMUST00000131537 MturnQ8CGA4 131 aa12.03□□□□□ -0.48
Lig3-204ENSMUST00000131537 Gm10139O88245 57 aa12.02□□□□□ -0.48
Lig3-204ENSMUST00000131537 Hint1P70349 126 aaKnown RBP12.02□□□□□ -0.48
Lig3-204ENSMUST00000131537 A930002H24RikQ8C8Y3 163 aa12.02□□□□□ -0.48
Lig3-204ENSMUST00000131537 Tmem243B2RVB9 118 aa12□□□□□ -0.49
Lig3-204ENSMUST00000131537 Spink13Q3UTS8 97 aa12□□□□□ -0.49
Lig3-204ENSMUST00000131537 Wfdc13Q5DQQ6 81 aa12□□□□□ -0.49
Lig3-204ENSMUST00000131537 Igkv8-26A0A075B5N5 123 aa11.98□□□□□ -0.49
Lig3-204ENSMUST00000131537 Gm10767Q3TQP0 103 aa11.98□□□□□ -0.49
Lig3-204ENSMUST00000131537 Igkv3-5A0A140T8M6 119 aa11.97□□□□□ -0.49
Lig3-204ENSMUST00000131537 A0A286YE02 88 aa11.97□□□□□ -0.49
Lig3-204ENSMUST00000131537 Fat3Q8BNA6 4555 aa11.97□□□□□ -0.49
Lig3-204ENSMUST00000131537 Anapc11Q9CPX9 84 aa11.97□□□□□ -0.49
Lig3-204ENSMUST00000131537 Abca13Q5SSE9 5034 aa11.96□□□□□ -0.49
Lig3-204ENSMUST00000131537 Bean1Q9EQG5 255 aa11.96□□□□□ -0.49
Lig3-204ENSMUST00000131537 Odf3bQ5M8M2 238 aa11.95□□□□□ -0.5
Lig3-204ENSMUST00000131537 Kiaa1109A2AAE1 5005 aa11.95□□□□□ -0.5
Lig3-204ENSMUST00000131537 Gm10135F6TEE5 83 aa11.95□□□□□ -0.5
Lig3-204ENSMUST00000131537 Sigmar1O55242 223 aa11.94□□□□□ -0.5
Lig3-204ENSMUST00000131537 Cox6cQ9CPQ1 76 aa11.94□□□□□ -0.5
Lig3-204ENSMUST00000131537 Igkv2-109A0A075B5K6 120 aa11.93□□□□□ -0.5
Lig3-204ENSMUST00000131537 NrepQ07475 68 aa11.93□□□□□ -0.5
Lig3-204ENSMUST00000131537 Lrp1Q91ZX7 4545 aaKnown RBP11.92□□□□□ -0.5
Lig3-204ENSMUST00000131537 4930524J08RikQ9CUJ5 163 aa11.92□□□□□ -0.5
Lig3-204ENSMUST00000131537 Vpreb3D3Z6J4 130 aa11.91□□□□□ -0.5
Lig3-204ENSMUST00000131537 Znf706Q9D115 76 aaKnown RBP11.9□□□□□ -0.51
Lig3-204ENSMUST00000131537 Dnhd1D3Z2X2 4750 aa11.88□□□□□ -0.51
Lig3-204ENSMUST00000131537 Vpreb1P13372 142 aa11.86□□□□□ -0.51
Lig3-204ENSMUST00000131537 Defa25Q5G864 92 aa11.83□□□□□ -0.52
Lig3-204ENSMUST00000131537 Gm26602M0QWA4 95 aa11.81□□□□□ -0.52
Lig3-204ENSMUST00000131537 9530003J23RikQ8BM26 151 aa11.81□□□□□ -0.52
Lig3-204ENSMUST00000131537 Gm28051J3QMA2 81 aa11.8□□□□□ -0.52
Lig3-204ENSMUST00000131537 Gm10401E9Q3K6 71 aa11.79□□□□□ -0.52
Lig3-204ENSMUST00000131537 1700020N15RikL7MTX3 112 aa11.79□□□□□ -0.52
Lig3-204ENSMUST00000131537 Gm37389A0A0A6YW05 95 aa11.79□□□□□ -0.52
Lig3-204ENSMUST00000131537 A830005F24RikQ8BRT5 167 aa11.79□□□□□ -0.52
Lig3-204ENSMUST00000131537 Acyp1P56376 99 aa11.78□□□□□ -0.52
Lig3-204ENSMUST00000131537 Cypt14J3QPF7 87 aa11.77□□□□□ -0.53
Lig3-204ENSMUST00000131537 Lamtor3O88653 124 aa11.77□□□□□ -0.53
Lig3-204ENSMUST00000131537 Vps25Q9CQ80 176 aa11.76□□□□□ -0.53
Lig3-204ENSMUST00000131537 Defb12Q8K4N3 78 aa11.74□□□□□ -0.53
Lig3-204ENSMUST00000131537 P06320 134 aa11.73□□□□□ -0.53
Lig3-204ENSMUST00000131537 Gm26920S4R2A5 56 aa11.73□□□□□ -0.53
Lig3-204ENSMUST00000131537 Gm7102J3QQ10 178 aa11.72□□□□□ -0.53
Lig3-204ENSMUST00000131537 Lce1mQ9CR91 182 aa11.72□□□□□ -0.53
Lig3-204ENSMUST00000131537 HydinQ80W93 5154 aa11.7□□□□□ -0.54
Lig3-204ENSMUST00000131537 Igkv3-10A0A0G2JGN0 119 aa11.7□□□□□ -0.54
Lig3-204ENSMUST00000131537 Mtatp8P03930 67 aa11.7□□□□□ -0.54
Lig3-204ENSMUST00000131537 D6Ertd527eA0A0N4SWI3 464 aa11.69□□□□□ -0.54
Lig3-204ENSMUST00000131537 A530084C06RikQ3UTW2 186 aa11.69□□□□□ -0.54
Lig3-204ENSMUST00000131537 Ifitm6A0A1B0GS75 124 aa11.68□□□□□ -0.54
Lig3-204ENSMUST00000131537 Sfta2E9PXB6 77 aa11.68□□□□□ -0.54
Lig3-204ENSMUST00000131537 Q8BT88 171 aa11.68□□□□□ -0.54
Lig3-204ENSMUST00000131537 Cox6a2P43023 97 aa11.67□□□□□ -0.54
Lig3-204ENSMUST00000131537 1700018G05RikA0A1B0GSI2 66 aa11.65□□□□□ -0.54
Lig3-204ENSMUST00000131537 Ube2v1Q9CZY3 147 aa11.65□□□□□ -0.54
Lig3-204ENSMUST00000131537 Ighv10-3A0A075B5T6 119 aa11.62□□□□□ -0.55
Lig3-204ENSMUST00000131537 PcloQ9QYX7 5068 aa11.61□□□□□ -0.55
Lig3-204ENSMUST00000131537 Gm9736A0A1W2P7N1 277 aa11.6□□□□□ -0.55
Lig3-204ENSMUST00000131537 Igkv8-27A0A0G2JF28 120 aa11.59□□□□□ -0.55
Lig3-204ENSMUST00000131537 Igkv8-30A0A140T8M3 121 aa11.59□□□□□ -0.55
Lig3-204ENSMUST00000131537 Chchd10Q7TNL9 138 aa11.59□□□□□ -0.55
Lig3-204ENSMUST00000131537 Spaca4Q80ZQ0 127 aa11.59□□□□□ -0.55
Lig3-204ENSMUST00000131537 Mycbp2Q7TPH6 4711 aa11.58□□□□□ -0.56
Lig3-204ENSMUST00000131537 Dph3Q8K0W9 82 aa11.57□□□□□ -0.56
Lig3-204ENSMUST00000131537 A730071L15RikQ8C4X0 137 aa11.55□□□□□ -0.56
Lig3-204ENSMUST00000131537 Gm28230A0A0A0MQ91 144 aa11.54□□□□□ -0.56
Lig3-204ENSMUST00000131537 Igkv8-28A0A0G2JE47 121 aa11.54□□□□□ -0.56
Lig3-204ENSMUST00000131537 Gm12353A2AGJ4 60 aa11.53□□□□□ -0.56
Lig3-204ENSMUST00000131537 Gm10308Q9CVR5 141 aa11.53□□□□□ -0.56
Lig3-204ENSMUST00000131537 Rbm3O89086 153 aaKnown RBP11.51□□□□□ -0.57
Lig3-204ENSMUST00000131537 Igkv3-4A0A140T8Q4 119 aa11.51□□□□□ -0.57
Lig3-204ENSMUST00000131537 Gm17689B3GLJ4 109 aa11.51□□□□□ -0.57
Lig3-204ENSMUST00000131537 Sprr2jO70561 109 aa11.49□□□□□ -0.57
Lig3-204ENSMUST00000131537 Gm21886J3QJU9 214 aa11.46□□□□□ -0.58
Lig3-204ENSMUST00000131537 Gm16253D3Z167 63 aa11.43□□□□□ -0.58
Lig3-204ENSMUST00000131537 Xcl1P47993 114 aa11.41□□□□□ -0.58
Lig3-204ENSMUST00000131537 Pde6gP09174 87 aa11.4□□□□□ -0.58
Lig3-204ENSMUST00000131537 Trav14d-3-dv8A0A075B619 120 aa11.39□□□□□ -0.59
Lig3-204ENSMUST00000131537 4930535I16RikQ9CUI2 172 aa11.38□□□□□ -0.59
Lig3-204ENSMUST00000131537 Gm44790A0A0N4SV91 103 aa11.37□□□□□ -0.59
Lig3-204ENSMUST00000131537 Lrp2A2ARV4 4660 aa11.36□□□□□ -0.59
Lig3-204ENSMUST00000131537 Cby1Q9D1C2 127 aa11.34□□□□□ -0.59
Lig3-204ENSMUST00000131537 Gm2310J3QNJ2 377 aa11.33□□□□□ -0.6
Lig3-204ENSMUST00000131537 Gm18596A0A1W2P860 280 aa11.32□□□□□ -0.6
Lig3-204ENSMUST00000131537 Rps29P62274 56 aa11.32□□□□□ -0.6
Lig3-204ENSMUST00000131537 Ormdl1Q921I0 153 aa11.31□□□□□ -0.6
Lig3-204ENSMUST00000131537 Herc1E9PZP8 4859 aa11.29□□□□□ -0.6
Lig3-204ENSMUST00000131537 Igkv8-21A0A140T8P7 120 aa11.29□□□□□ -0.6
Lig3-204ENSMUST00000131537 Tmem213Q08EA8 116 aa11.29□□□□□ -0.6
Lig3-204ENSMUST00000131537 Mrpl34Q99N91 92 aa11.29□□□□□ -0.6
Lig3-204ENSMUST00000131537 UqcrqQ9CQ69 82 aa11.28□□□□□ -0.6
Lig3-204ENSMUST00000131537 C130032M10RikQ8C888 123 aa11.28□□□□□ -0.6
Lig3-204ENSMUST00000131537 Gm37013Q8K491 104 aa11.25□□□□□ -0.61
Lig3-204ENSMUST00000131537 Gm5965D3Z724 196 aa11.22□□□□□ -0.61
Lig3-204ENSMUST00000131537 Gm20604F8WIA3 75 aa11.19□□□□□ -0.62
Lig3-204ENSMUST00000131537 GhrhP16043 103 aa11.18□□□□□ -0.62
Lig3-204ENSMUST00000131537 MplkipQ9D011 178 aa11.18□□□□□ -0.62
Lig3-204ENSMUST00000131537 Pxt1Q8K459 51 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms