RNA–Protein interactions for RNA: ENSMUST00000111254.1

Alx4-202, Transcript of Homeobox protein aristaless-like 4, mousemouse

TSL 1 (best) BASIC

Gene Alx4, Length 7,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4-202ENSMUST00000111254 Krtap29-1A2A5X4 342 aa7.51□□□□□ -1.21
Alx4-202ENSMUST00000111254 2310050C09RikG5E8Z3 280 aa7.51□□□□□ -1.21
Alx4-202ENSMUST00000111254 Unc79Q0KK59 2596 aa7.51□□□□□ -1.21
Alx4-202ENSMUST00000111254 Krtap13O88375 197 aa7.49□□□□□ -1.21
Alx4-202ENSMUST00000111254 Usp34Q6ZQ93 3582 aa7.45□□□□□ -1.22
Alx4-202ENSMUST00000111254 Cep350E9Q309 3095 aa7.44□□□□□ -1.22
Alx4-202ENSMUST00000111254 Abca12E9Q876 2595 aa7.44□□□□□ -1.22
Alx4-202ENSMUST00000111254 Gm9507D3Z5T3 223 aa7.43□□□□□ -1.22
Alx4-202ENSMUST00000111254 HrnrQ8VHD8 2496 aa7.42□□□□□ -1.22
Alx4-202ENSMUST00000111254 FasnP19096 2504 aaKnown RBP7.42□□□□□ -1.22
Alx4-202ENSMUST00000111254 Cystm1Q8K353 104 aa7.41□□□□□ -1.22
Alx4-202ENSMUST00000111254 Ankrd11E9Q4F7 2643 aa7.41□□□□□ -1.22
Alx4-202ENSMUST00000111254 Fn1P11276 2477 aaKnown RBP7.36□□□□□ -1.23
Alx4-202ENSMUST00000111254 Krtap10-4Q08EG8 221 aa7.34□□□□□ -1.23
Alx4-202ENSMUST00000111254 Gm21887J3QQ04 176 aa7.33□□□□□ -1.24
Alx4-202ENSMUST00000111254 A730071L15RikQ8C4X0 137 aa7.32□□□□□ -1.24
Alx4-202ENSMUST00000111254 Gm11565A2A4M7 156 aa7.31□□□□□ -1.24
Alx4-202ENSMUST00000111254 AtrQ9JKK8 2635 aa7.31□□□□□ -1.24
Alx4-202ENSMUST00000111254 TrioQ0KL02 3102 aa7.3□□□□□ -1.24
Alx4-202ENSMUST00000111254 Krtap10-10A0A1W2P7T6 217 aa7.27□□□□□ -1.25
Alx4-202ENSMUST00000111254 Cox6b2Q80ZN9 88 aa7.27□□□□□ -1.25
Alx4-202ENSMUST00000111254 Bod1lE9Q6J5 3032 aa7.26□□□□□ -1.25
Alx4-202ENSMUST00000111254 Tnp2P11378 117 aa7.25□□□□□ -1.25
Alx4-202ENSMUST00000111254 Gm2310J3QNJ2 377 aa7.24□□□□□ -1.25
Alx4-202ENSMUST00000111254 Prune2Q52KR3 3084 aa7.23□□□□□ -1.25
Alx4-202ENSMUST00000111254 CenpfE9Q3P4 2997 aaKnown RBP7.21□□□□□ -1.25
Alx4-202ENSMUST00000111254 Krtap14O08640 167 aa7.21□□□□□ -1.25
Alx4-202ENSMUST00000111254 Myo18bE9PV66 2605 aa7.2□□□□□ -1.26
Alx4-202ENSMUST00000111254 Tnp1P10856 55 aa7.2□□□□□ -1.26
Alx4-202ENSMUST00000111254 Ndufaf8A2AMZ4 74 aa7.19□□□□□ -1.26
Alx4-202ENSMUST00000111254 Rps29P62274 56 aa7.18□□□□□ -1.26
Alx4-202ENSMUST00000111254 PcntP48725 2898 aa7.17□□□□□ -1.26
Alx4-202ENSMUST00000111254 1700042G07RikB1AUF7 90 aa7.16□□□□□ -1.26
Alx4-202ENSMUST00000111254 Cdh23Q99PF4 3354 aa7.16□□□□□ -1.26
Alx4-202ENSMUST00000111254 2310057N15RikQ9D6T8 200 aa7.15□□□□□ -1.26
Alx4-202ENSMUST00000111254 FlnbQ80X90 2602 aaKnown RBP7.15□□□□□ -1.26
Alx4-202ENSMUST00000111254 Zfp292Q9Z2U2 2698 aa7.15□□□□□ -1.26
Alx4-202ENSMUST00000111254 4933415A04RikQ9D443 101 aa7.15□□□□□ -1.27
Alx4-202ENSMUST00000111254 Col12a1Q60847 3120 aa7.14□□□□□ -1.27
Alx4-202ENSMUST00000111254 FlnaQ8BTM8 2647 aaKnown RBP7.13□□□□□ -1.27
Alx4-202ENSMUST00000111254 Gm9195A0A140LHT4 2805 aa7.12□□□□□ -1.27
Alx4-202ENSMUST00000111254 Mki67E9PVX6 3177 aaKnown RBP7.11□□□□□ -1.27
Alx4-202ENSMUST00000111254 Kmt2bO08550 2713 aa7.08□□□□□ -1.28
Alx4-202ENSMUST00000111254 Ranbp2Q9ERU9 3053 aaKnown RBP7.08□□□□□ -1.28
Alx4-202ENSMUST00000111254 Stab1Q8R4Y4 2571 aa7.04□□□□□ -1.28
Alx4-202ENSMUST00000111254 Gm2696A0A1W2P709 240 aa7.04□□□□□ -1.28
Alx4-202ENSMUST00000111254 Notch1Q01705 2531 aa7.01□□□□□ -1.29
Alx4-202ENSMUST00000111254 Gm9112A2AI92 75 aa7.01□□□□□ -1.29
Alx4-202ENSMUST00000111254 Gm5965D3Z724 196 aa7.01□□□□□ -1.29
Alx4-202ENSMUST00000111254 Akap13E9Q394 2776 aa6.98□□□□□ -1.29
Alx4-202ENSMUST00000111254 Rev3lQ61493 3122 aa6.98□□□□□ -1.29
Alx4-202ENSMUST00000111254 D6Ertd527eA0A0N4SWI3 464 aa6.98□□□□□ -1.29
Alx4-202ENSMUST00000111254 2310061N02RikQ9D6S9 174 aa6.97□□□□□ -1.29
Alx4-202ENSMUST00000111254 Celsr3Q91ZI0 3301 aa6.96□□□□□ -1.3
Alx4-202ENSMUST00000111254 Hectd1Q69ZR2 2618 aaKnown RBP6.95□□□□□ -1.3
Alx4-202ENSMUST00000111254 Gcn1E9PVA8 2671 aaKnown RBP6.95□□□□□ -1.3
Alx4-202ENSMUST00000111254 HttP42859 3119 aa6.93□□□□□ -1.3
Alx4-202ENSMUST00000111254 Szt2A2A9C3 3431 aa6.93□□□□□ -1.3
Alx4-202ENSMUST00000111254 Lama2Q60675 3118 aaKnown RBP6.92□□□□□ -1.3
Alx4-202ENSMUST00000111254 Gm7173A0A0G2JEB6 3132 aa6.92□□□□□ -1.3
Alx4-202ENSMUST00000111254 Unc80Q8BLN6 3261 aa6.9□□□□□ -1.3
Alx4-202ENSMUST00000111254 Zfhx3Q61329 3726 aa6.88□□□□□ -1.31
Alx4-202ENSMUST00000111254 Gm40193A0A1B0GT39 78 aa6.88□□□□□ -1.31
Alx4-202ENSMUST00000111254 Map1aQ9QYR6 2776 aa6.87□□□□□ -1.31
Alx4-202ENSMUST00000111254 Vps13aQ5H8C4 3166 aa6.84□□□□□ -1.32
Alx4-202ENSMUST00000111254 A930033H14RikG5E8X6 103 aa6.83□□□□□ -1.32
Alx4-202ENSMUST00000111254 Igsf10Q3V1M1 2594 aa6.83□□□□□ -1.32
Alx4-202ENSMUST00000111254 Cfap54Q8C6S9 3106 aa6.81□□□□□ -1.32
Alx4-202ENSMUST00000111254 9530053A07RikE9PVG8 2581 aa6.78□□□□□ -1.32
Alx4-202ENSMUST00000111254 Frem2Q6NVD0 3160 aa6.78□□□□□ -1.32
Alx4-202ENSMUST00000111254 AtmQ62388 3066 aa6.78□□□□□ -1.32
Alx4-202ENSMUST00000111254 NipblQ6KCD5 2798 aaKnown RBP6.77□□□□□ -1.33
Alx4-202ENSMUST00000111254 BptfA2A654 3036 aaKnown RBP6.76□□□□□ -1.33
Alx4-202ENSMUST00000111254 MgaA2AWL7 3003 aaKnown RBP6.76□□□□□ -1.33
Alx4-202ENSMUST00000111254 Prrc2cQ3TLH4 2846 aaKnown RBP6.75□□□□□ -1.33
Alx4-202ENSMUST00000111254 Gm9918Q8BUR5 174 aa6.75□□□□□ -1.33
Alx4-202ENSMUST00000111254 Tep1P97499 2629 aa6.73□□□□□ -1.33
Alx4-202ENSMUST00000111254 Chd7A2AJK6 2986 aaKnown RBP6.73□□□□□ -1.33
Alx4-202ENSMUST00000111254 Mast4Q811L6 2618 aa6.71□□□□□ -1.34
Alx4-202ENSMUST00000111254 Dmxl1Q6PNC0 3013 aa6.71□□□□□ -1.34
Alx4-202ENSMUST00000111254 Itpr3P70227 2670 aa6.71□□□□□ -1.34
Alx4-202ENSMUST00000111254 Brca2P97929 3329 aa6.68□□□□□ -1.34
Alx4-202ENSMUST00000111254 Prm2P07978 107 aa6.67□□□□□ -1.34
Alx4-202ENSMUST00000111254 Col6a3E9PWQ3 3284 aa6.67□□□□□ -1.34
Alx4-202ENSMUST00000111254 B930094E09RikQ8C4T2 136 aa6.66□□□□□ -1.34
Alx4-202ENSMUST00000111254 Myo15aQ9QZZ4 3511 aa6.6□□□□□ -1.35
Alx4-202ENSMUST00000111254 Ash1lQ99MY8 2958 aa6.6□□□□□ -1.35
Alx4-202ENSMUST00000111254 Gm20537G3UYK7 97 aa6.59□□□□□ -1.35
Alx4-202ENSMUST00000111254 Nbeal2Q6ZQA0 2742 aa6.58□□□□□ -1.36
Alx4-202ENSMUST00000111254 Dchs2A0A0A6YW72 3346 aa6.57□□□□□ -1.36
Alx4-202ENSMUST00000111254 FrylF8VQ05 3007 aa6.57□□□□□ -1.36
Alx4-202ENSMUST00000111254 4933428G20RikQ9D3X4 101 aa6.56□□□□□ -1.36
Alx4-202ENSMUST00000111254 Tnrc18Q80WC3 2878 aa6.54□□□□□ -1.36
Alx4-202ENSMUST00000111254 AspmQ8CJ27 3122 aa6.54□□□□□ -1.36
Alx4-202ENSMUST00000111254 Lrrc37aB1AWG4 3215 aa6.53□□□□□ -1.36
Alx4-202ENSMUST00000111254 VcanQ62059 3357 aa6.53□□□□□ -1.36
Alx4-202ENSMUST00000111254 Stab2Q8R4U0 2559 aa6.51□□□□□ -1.37
Alx4-202ENSMUST00000111254 Wdfy3Q6VNB8 3508 aa6.51□□□□□ -1.37
Alx4-202ENSMUST00000111254 SmcpP15265 143 aa6.51□□□□□ -1.37
Alx4-202ENSMUST00000111254 Ubr5Q80TP3 2792 aa6.5□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms