RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 BC029722A0A0N4SW31 51 aa3.82□□□□□ -1.8
Vcan-203ENSMUST00000109546 Gm19426M0QWC7 77 aa3.81□□□□□ -1.8
Vcan-203ENSMUST00000109546 Lce6aD3YV94 81 aa3.8□□□□□ -1.8
Vcan-203ENSMUST00000109546 NbdyA0A0N4SUI7 68 aa3.79□□□□□ -1.8
Vcan-203ENSMUST00000109546 Tep1P97499 2629 aa3.79□□□□□ -1.8
Vcan-203ENSMUST00000109546 Krtap24-1G3X9A2 248 aa3.78□□□□□ -1.8
Vcan-203ENSMUST00000109546 Pkd1l1Q8R526 2615 aa3.78□□□□□ -1.8
Vcan-203ENSMUST00000109546 Utp20Q5XG71 2788 aaKnown RBP3.78□□□□□ -1.8
Vcan-203ENSMUST00000109546 FlnbQ80X90 2602 aaKnown RBP3.77□□□□□ -1.81
Vcan-203ENSMUST00000109546 Gm16253D3Z167 63 aa3.75□□□□□ -1.81
Vcan-203ENSMUST00000109546 Gm10139O88245 57 aa3.74□□□□□ -1.81
Vcan-203ENSMUST00000109546 Tnp1P10856 55 aa3.74□□□□□ -1.81
Vcan-203ENSMUST00000109546 Anapc11Q9CPX9 84 aa3.74□□□□□ -1.81
Vcan-203ENSMUST00000109546 OxtP35454 125 aa3.74□□□□□ -1.81
Vcan-203ENSMUST00000109546 SmcpP15265 143 aa3.73□□□□□ -1.81
Vcan-203ENSMUST00000109546 2310050C09RikG5E8Z3 280 aa3.73□□□□□ -1.81
Vcan-203ENSMUST00000109546 Zfp292Q9Z2U2 2698 aa3.73□□□□□ -1.81
Vcan-203ENSMUST00000109546 Krtap13O88375 197 aa3.72□□□□□ -1.81
Vcan-203ENSMUST00000109546 Krtap15-1Q9QZU5 150 aa3.72□□□□□ -1.81
Vcan-203ENSMUST00000109546 Gm9195A0A140LHT4 2805 aa3.71□□□□□ -1.82
Vcan-203ENSMUST00000109546 Cystm1Q8K353 104 aa3.7□□□□□ -1.82
Vcan-203ENSMUST00000109546 Itpr3P70227 2670 aa3.69□□□□□ -1.82
Vcan-203ENSMUST00000109546 NipblQ6KCD5 2798 aaKnown RBP3.66□□□□□ -1.82
Vcan-203ENSMUST00000109546 Rps29P62274 56 aa3.66□□□□□ -1.82
Vcan-203ENSMUST00000109546 Sprr1aQ62266 144 aa3.65□□□□□ -1.83
Vcan-203ENSMUST00000109546 Gm5767A0A0J9YTU8 78 aa3.64□□□□□ -1.83
Vcan-203ENSMUST00000109546 A730071L15RikQ8C4X0 137 aa3.64□□□□□ -1.83
Vcan-203ENSMUST00000109546 Itpr2Q9Z329 2701 aa3.61□□□□□ -1.83
Vcan-203ENSMUST00000109546 Col6a5A6H584 2640 aa3.61□□□□□ -1.83
Vcan-203ENSMUST00000109546 Krtap14O08640 167 aa3.61□□□□□ -1.83
Vcan-203ENSMUST00000109546 FcgbpE9Q0B5 2583 aa3.58□□□□□ -1.84
Vcan-203ENSMUST00000109546 Gm2310J3QNJ2 377 aa3.58□□□□□ -1.84
Vcan-203ENSMUST00000109546 Gm17349F7BGH6 99 aa3.57□□□□□ -1.84
Vcan-203ENSMUST00000109546 Ubr5Q80TP3 2792 aa3.56□□□□□ -1.84
Vcan-203ENSMUST00000109546 Prm2P07978 107 aa3.54□□□□□ -1.84
Vcan-203ENSMUST00000109546 2310057N15RikQ9D6T8 200 aa3.54□□□□□ -1.84
Vcan-203ENSMUST00000109546 Krtap29-1A2A5X4 342 aa3.53□□□□□ -1.84
Vcan-203ENSMUST00000109546 Lelp1Q9DAE3 120 aa3.53□□□□□ -1.84
Vcan-203ENSMUST00000109546 Tex15F8VPN2 2785 aa3.52□□□□□ -1.85
Vcan-203ENSMUST00000109546 ApcQ61315 2845 aa3.51□□□□□ -1.85
Vcan-203ENSMUST00000109546 Gm5965D3Z724 196 aa3.5□□□□□ -1.85
Vcan-203ENSMUST00000109546 Nbeal2Q6ZQA0 2742 aa3.5□□□□□ -1.85
Vcan-203ENSMUST00000109546 Itpr1P11881 2749 aa3.5□□□□□ -1.85
Vcan-203ENSMUST00000109546 Srrm2Q8BTI8 2703 aaKnown RBP3.48□□□□□ -1.85
Vcan-203ENSMUST00000109546 D6Ertd527eA0A0N4SWI3 464 aa3.46□□□□□ -1.85
Vcan-203ENSMUST00000109546 Hivep1Q03172 2688 aa3.46□□□□□ -1.86
Vcan-203ENSMUST00000109546 Muc2Q80Z19 2680 aa3.45□□□□□ -1.86
Vcan-203ENSMUST00000109546 Gm17416Q30KP4 66 aa3.43□□□□□ -1.86
Vcan-203ENSMUST00000109546 TgO08710 2766 aa3.42□□□□□ -1.86
Vcan-203ENSMUST00000109546 Gm11565A2A4M7 156 aa3.4□□□□□ -1.86
Vcan-203ENSMUST00000109546 4933428G20RikQ9D3X4 101 aa3.39□□□□□ -1.87
Vcan-203ENSMUST00000109546 Gm20537G3UYK7 97 aa3.36□□□□□ -1.87
Vcan-203ENSMUST00000109546 B930094E09RikQ8C4T2 136 aa3.35□□□□□ -1.87
Vcan-203ENSMUST00000109546 Gm17402F6Z0L5 76 aa3.34□□□□□ -1.88
Vcan-203ENSMUST00000109546 Zzef1Q5SSH7 2924 aa3.33□□□□□ -1.88
Vcan-203ENSMUST00000109546 Tnrc18Q80WC3 2878 aa3.33□□□□□ -1.88
Vcan-203ENSMUST00000109546 Megf8P60882 2789 aa3.32□□□□□ -1.88
Vcan-203ENSMUST00000109546 DspE9Q557 2883 aaKnown RBP3.31□□□□□ -1.88
Vcan-203ENSMUST00000109546 Tnp2P11378 117 aa3.3□□□□□ -1.88
Vcan-203ENSMUST00000109546 A930033H14RikG5E8X6 103 aa3.3□□□□□ -1.88
Vcan-203ENSMUST00000109546 Tenm1Q9WTS4 2731 aa3.29□□□□□ -1.88
Vcan-203ENSMUST00000109546 Ep400Q8CHI8 3072 aaKnown RBP3.29□□□□□ -1.88
Vcan-203ENSMUST00000109546 Tenm3Q9WTS6 2715 aa3.28□□□□□ -1.88
Vcan-203ENSMUST00000109546 Bod1lE9Q6J5 3032 aa3.28□□□□□ -1.88
Vcan-203ENSMUST00000109546 FlncQ8VHX6 2726 aaKnown RBP3.28□□□□□ -1.88
Vcan-203ENSMUST00000109546 Chd9Q8BYH8 2885 aa3.28□□□□□ -1.88
Vcan-203ENSMUST00000109546 CenpfE9Q3P4 2997 aaKnown RBP3.26□□□□□ -1.89
Vcan-203ENSMUST00000109546 Dnah12Q3V0Q1 3086 aa3.24□□□□□ -1.89
Vcan-203ENSMUST00000109546 Pdzd2E9Q1M1 2796 aa3.22□□□□□ -1.89
Vcan-203ENSMUST00000109546 Gm3285A0A1W2P7U0 201 aa3.22□□□□□ -1.89
Vcan-203ENSMUST00000109546 Gm3250E9Q1M3 230 aa3.21□□□□□ -1.9
Vcan-203ENSMUST00000109546 BptfA2A654 3036 aaKnown RBP3.2□□□□□ -1.9
Vcan-203ENSMUST00000109546 Nf1Q04690 2841 aa3.19□□□□□ -1.9
Vcan-203ENSMUST00000109546 Gm42715A0A087WP63 3095 aaKnown RBP3.16□□□□□ -1.9
Vcan-203ENSMUST00000109546 2310079G19RikQ9D6L6 185 aa3.16□□□□□ -1.9
Vcan-203ENSMUST00000109546 Igfn1Q3KNY0 2849 aa3.14□□□□□ -1.91
Vcan-203ENSMUST00000109546 Golgb1E9PVZ8 3238 aa3.14□□□□□ -1.91
Vcan-203ENSMUST00000109546 Cep350E9Q309 3095 aa3.14□□□□□ -1.91
Vcan-203ENSMUST00000109546 KalrnA2CG49 2964 aa3.13□□□□□ -1.91
Vcan-203ENSMUST00000109546 Ash1lQ99MY8 2958 aa3.11□□□□□ -1.91
Vcan-203ENSMUST00000109546 2310061N02RikQ9D6S9 174 aa3.1□□□□□ -1.91
Vcan-203ENSMUST00000109546 LrbaQ9ESE1 2856 aa3.1□□□□□ -1.91
Vcan-203ENSMUST00000109546 Gm9508A0A1W2P7W0 230 aa3.09□□□□□ -1.91
Vcan-203ENSMUST00000109546 FrylF8VQ05 3007 aa3.09□□□□□ -1.91
Vcan-203ENSMUST00000109546 MgaA2AWL7 3003 aaKnown RBP3.08□□□□□ -1.92
Vcan-203ENSMUST00000109546 2210017I01RikA0A0A6YVV1 95 aa3.07□□□□□ -1.92
Vcan-203ENSMUST00000109546 Chd7A2AJK6 2986 aaKnown RBP3.06□□□□□ -1.92
Vcan-203ENSMUST00000109546 Zfhx3Q61329 3726 aa3.04□□□□□ -1.92
Vcan-203ENSMUST00000109546 Tenm2Q9WTS5 2764 aa3.04□□□□□ -1.92
Vcan-203ENSMUST00000109546 Dmxl1Q6PNC0 3013 aa3.02□□□□□ -1.93
Vcan-203ENSMUST00000109546 SrcapA0A087WQ44 3271 aa3.02□□□□□ -1.93
Vcan-203ENSMUST00000109546 Trank1Q8BV79 2999 aa3.01□□□□□ -1.93
Vcan-203ENSMUST00000109546 Lama1P19137 3084 aa3.01□□□□□ -1.93
Vcan-203ENSMUST00000109546 Jbts17Q8CE72 3214 aa3.01□□□□□ -1.93
Vcan-203ENSMUST00000109546 Gm19668J3QMD1 248 aa3□□□□□ -1.93
Vcan-203ENSMUST00000109546 Gm3233E9Q2H5 230 aa2.99□□□□□ -1.93
Vcan-203ENSMUST00000109546 Gm7138L7N2C3 230 aa2.99□□□□□ -1.93
Vcan-203ENSMUST00000109546 Gm3238W4VSP7 230 aa2.99□□□□□ -1.93
Vcan-203ENSMUST00000109546 Prune2Q52KR3 3084 aa2.99□□□□□ -1.93
Vcan-203ENSMUST00000109546 Fbn2Q61555 2907 aa2.97□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms