RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Muc2Q80Z19 2680 aa4.6□□□□□ -1.67
Cntn1-202ENSMUST00000068378 Gm7257D3YX25 99 aa4.6□□□□□ -1.67
Cntn1-202ENSMUST00000068378 Gm21886J3QJU9 214 aa4.6□□□□□ -1.67
Cntn1-202ENSMUST00000068378 Cela2aP05208 271 aa4.6□□□□□ -1.67
Cntn1-202ENSMUST00000068378 Nbeal1E9PYP2 2688 aa4.6□□□□□ -1.67
Cntn1-202ENSMUST00000068378 Tomm7Q9D173 55 aa4.6□□□□□ -1.67
Cntn1-202ENSMUST00000068378 Ighv2-7A0A075B5Q8 116 aa4.59□□□□□ -1.67
Cntn1-202ENSMUST00000068378 Col7a1Q63870 2944 aa4.59□□□□□ -1.67
Cntn1-202ENSMUST00000068378 Brwd1Q921C3 2304 aa4.58□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Cep192E9Q4Y4 2514 aaKnown RBP4.58□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Setd2E9Q5F9 2537 aa4.58□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Abca12E9Q876 2595 aa4.58□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Gm10772F7AIG4 85 aa4.58□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Gm10267M0QWD8 85 aa4.58□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Usp9xP70398 2559 aaKnown RBP4.57□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Ighv8-13A0A075B5Y0 101 aa4.57□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Cox7bP56393 80 aa4.57□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Q8BGJ3 129 aa4.56□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Ndufb1P0DN34 57 aa4.56□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Zcchc13Q9D548 170 aa4.56□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Romo1P60603 79 aa4.55□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Myo18bE9PV66 2605 aa4.55□□□□□ -1.68
Cntn1-202ENSMUST00000068378 FlnbQ80X90 2602 aaKnown RBP4.54□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Tcl1b3P56842 122 aa4.54□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Rpl37aP61514 92 aa4.54□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Krtap26-1Q9D7N2 215 aa4.54□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Chd6A3KFM7 2711 aa4.54□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Cox6a2P43023 97 aa4.54□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Gm10226O88253 85 aa4.53□□□□□ -1.68
Cntn1-202ENSMUST00000068378 AY074887Q8R5F9 132 aa4.53□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Epg5Q80TA9 2572 aa4.53□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Hspg2Q05793 3707 aaKnown RBP4.53□□□□□ -1.68
Cntn1-202ENSMUST00000068378 Tenm2Q9WTS5 2764 aa4.52□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Gm9112A2AI92 75 aa4.52□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Unc79Q0KK59 2596 aa4.51□□□□□ -1.69
Cntn1-202ENSMUST00000068378 MtorQ9JLN9 2549 aa4.5□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Gm43218A0A0G2JGT0 114 aa4.5□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Tex15F8VPN2 2785 aa4.5□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Nop10Q9CQS2 64 aa4.49□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Nbeal2Q6ZQA0 2742 aa4.49□□□□□ -1.69
Cntn1-202ENSMUST00000068378 PscaP57096 123 aa4.47□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Gm4707V9GXN5 68 aa4.47□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Defb9Q8R2I6 67 aa4.47□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Igkv3-9A0A140T8P4 119 aa4.47□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Sprr1bQ62267 153 aa4.46□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Lelp1Q9DAE3 120 aa4.46□□□□□ -1.69
Cntn1-202ENSMUST00000068378 Notch2O35516 2470 aa4.46□□□□□ -1.69
Cntn1-202ENSMUST00000068378 1700018G05RikA0A1B0GSI2 66 aa4.46□□□□□ -1.7
Cntn1-202ENSMUST00000068378 PtprqP0C5E4 2300 aa4.46□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Q99M08 65 aa4.45□□□□□ -1.7
Cntn1-202ENSMUST00000068378 RetnlbQ99P86 105 aa4.45□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Abca2P41234 2434 aa4.45□□□□□ -1.7
Cntn1-202ENSMUST00000068378 9530053A07RikE9PVG8 2581 aa4.44□□□□□ -1.7
Cntn1-202ENSMUST00000068378 ApcQ61315 2845 aa4.44□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Odf3bQ5M8M2 238 aa4.44□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Bahcc1Q3UHR0 2643 aa4.44□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Srrm2Q8BTI8 2703 aaKnown RBP4.43□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Tenm4Q3UHK6 2771 aa4.43□□□□□ -1.7
Cntn1-202ENSMUST00000068378 PrlhG3UWC3 86 aa4.43□□□□□ -1.7
Cntn1-202ENSMUST00000068378 CriptO70333 101 aa4.43□□□□□ -1.7
Cntn1-202ENSMUST00000068378 BsnO88737 3942 aa4.43□□□□□ -1.7
Cntn1-202ENSMUST00000068378 FlncQ8VHX6 2726 aaKnown RBP4.42□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Ank2Q8C8R3 3898 aa4.41□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Fbn1Q61554 2873 aaKnown RBP4.41□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Sprr3O09116 238 aa4.41□□□□□ -1.7
Cntn1-202ENSMUST00000068378 PolqQ8CGS6 2544 aa4.41□□□□□ -1.7
Cntn1-202ENSMUST00000068378 Usmg5Q78IK2 58 aa4.41□□□□□ -1.7
Cntn1-202ENSMUST00000068378 NipblQ6KCD5 2798 aaKnown RBP4.4□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Ndufaf8A2AMZ4 74 aa4.4□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Uqcr11Q9CPX8 56 aa4.4□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Krtap31-2Q8CAY5 177 aa4.38□□□□□ -1.71
Cntn1-202ENSMUST00000068378 PrcdQ00LT2 53 aa4.38□□□□□ -1.71
Cntn1-202ENSMUST00000068378 A730009L09RikA0A1B0GS82 72 aa4.37□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Gm21798J3QNU5 87 aa4.37□□□□□ -1.71
Cntn1-202ENSMUST00000068378 OtogO55225 2910 aa4.36□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Defb42Q8BVB5 75 aa4.36□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Krtap31-1Q9D644 177 aa4.36□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Gm2310J3QNJ2 377 aa4.35□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Wfdc10Q3V2J9 124 aa4.35□□□□□ -1.71
Cntn1-202ENSMUST00000068378 FlnaQ8BTM8 2647 aaKnown RBP4.35□□□□□ -1.71
Cntn1-202ENSMUST00000068378 Zfp462B1AWL2 2495 aaKnown RBP4.32□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Gm3443F7CCV5 94 aa4.32□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Gm28230A0A0A0MQ91 144 aa4.31□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Prol1E9PYQ4 312 aa4.3□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Gm3250E9Q1M3 230 aa4.3□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Megf8P60882 2789 aa4.3□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Camk2n1Q6QWF9 78 aa4.3□□□□□ -1.72
Cntn1-202ENSMUST00000068378 BC067074F6RXI4 2391 aa4.3□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Fam168bQ80XQ8 194 aa4.29□□□□□ -1.72
Cntn1-202ENSMUST00000068378 CicQ924A2 2510 aa4.29□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Hivep1Q03172 2688 aa4.29□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Sprr4Q8CGN8 76 aa4.29□□□□□ -1.72
Cntn1-202ENSMUST00000068378 AW011738F6S7Q2 159 aa4.28□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Krtap14O08640 167 aa4.28□□□□□ -1.72
Cntn1-202ENSMUST00000068378 Gm3880A0A1B0GSB3 72 aa4.27□□□□□ -1.73
Cntn1-202ENSMUST00000068378 Defb1P56386 69 aa4.27□□□□□ -1.73
Cntn1-202ENSMUST00000068378 Pdzd2E9Q1M1 2796 aa4.27□□□□□ -1.73
Cntn1-202ENSMUST00000068378 Usp9yF8VPU6 2556 aa4.27□□□□□ -1.73
Cntn1-202ENSMUST00000068378 Fn1P11276 2477 aaKnown RBP4.26□□□□□ -1.73
Cntn1-202ENSMUST00000068378 VwfQ8CIZ8 2813 aa4.25□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 97.1 ms