RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 UqcrqQ9CQ69 82 aa9.64□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Gm10267M0QWD8 85 aa9.63□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Atox1O08997 68 aaKnown RBP9.63□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Gm21886J3QJU9 214 aa9.63□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Igkv3-7A0A0G2JE31 119 aa9.62□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Ighv2-2A0A075B5P8 116 aa9.62□□□□□ -0.87
Rtf1-201ENSMUST00000028767 P01821 116 aa9.62□□□□□ -0.87
Rtf1-201ENSMUST00000028767 1700074P13RikQ9D9G7 251 aa9.62□□□□□ -0.87
Rtf1-201ENSMUST00000028767 A330070K13RikQ8CA53 115 aa9.61□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Q8K1L6 76 aa9.61□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Prol1E9PYQ4 312 aa9.6□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Krtap16-1A2A5X5 502 aa9.6□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Gm10642Q3TWM1 71 aa9.59□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Fam229bQ8CF36 80 aa9.59□□□□□ -0.87
Rtf1-201ENSMUST00000028767 Defb13Q8R2I4 64 aa9.58□□□□□ -0.88
Rtf1-201ENSMUST00000028767 P84750 121 aa9.58□□□□□ -0.88
Rtf1-201ENSMUST00000028767 Gm10570F6VB42 170 aa9.55□□□□□ -0.88
Rtf1-201ENSMUST00000028767 Gm20604F8WIA3 75 aa9.55□□□□□ -0.88
Rtf1-201ENSMUST00000028767 Igkv3-3A0A140T8Q0 119 aa9.55□□□□□ -0.88
Rtf1-201ENSMUST00000028767 Q8BT88 171 aa9.55□□□□□ -0.88
Rtf1-201ENSMUST00000028767 Ccdc179J3QM76 67 aa9.53□□□□□ -0.88
Rtf1-201ENSMUST00000028767 Gm7276Q3TYW4 209 aa9.53□□□□□ -0.88
Rtf1-201ENSMUST00000028767 Srrm2Q8BTI8 2703 aaKnown RBP9.53□□□□□ -0.88
Rtf1-201ENSMUST00000028767 Gm5617Q91VN2 117 aa9.52□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Igkv8-19A0A0G2JFN8 121 aa9.52□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Cystm1Q8K353 104 aa9.52□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Serp1Q9Z1W5 66 aa9.51□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Coa6Q8BGD8 79 aa9.51□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Rpl37aP61514 92 aa9.51□□□□□ -0.89
Rtf1-201ENSMUST00000028767 ApcQ61315 2845 aa9.5□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Wfdc3Q14AE4 130 aa9.5□□□□□ -0.89
Rtf1-201ENSMUST00000028767 A930002H24RikQ8C8Y3 163 aa9.5□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Tenm4Q3UHK6 2771 aa9.48□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Znf706Q9D115 76 aaKnown RBP9.48□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Plac8Q9JI48 112 aa9.48□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Gm9508A0A1W2P7W0 230 aa9.47□□□□□ -0.89
Rtf1-201ENSMUST00000028767 Chchd10Q7TNL9 138 aa9.46□□□□□ -0.9
Rtf1-201ENSMUST00000028767 Defb39Q70KL3 74 aa9.45□□□□□ -0.9
Rtf1-201ENSMUST00000028767 Znf414Q9DCK4 299 aa9.44□□□□□ -0.9
Rtf1-201ENSMUST00000028767 Defb9Q8R2I6 67 aa9.4□□□□□ -0.9
Rtf1-201ENSMUST00000028767 Defb11Q8R2I7 77 aa9.39□□□□□ -0.91
Rtf1-201ENSMUST00000028767 Rps28P62858 69 aaKnown RBP9.38□□□□□ -0.91
Rtf1-201ENSMUST00000028767 Gm10197F6QEY5 67 aa9.38□□□□□ -0.91
Rtf1-201ENSMUST00000028767 A730071L15RikQ8C4X0 137 aa9.37□□□□□ -0.91
Rtf1-201ENSMUST00000028767 A530084C06RikQ3UTW2 186 aa9.37□□□□□ -0.91
Rtf1-201ENSMUST00000028767 SptssbQ925E8 76 aa9.37□□□□□ -0.91
Rtf1-201ENSMUST00000028767 H2al1bA0A087WP11 105 aa9.37□□□□□ -0.91
Rtf1-201ENSMUST00000028767 Gm27235Q3UW50 83 aa9.37□□□□□ -0.91
Rtf1-201ENSMUST00000028767 Fam104aA2A6P4 185 aa9.34□□□□□ -0.91
Rtf1-201ENSMUST00000028767 AI606181Q8C7B9 129 aa9.34□□□□□ -0.91
Rtf1-201ENSMUST00000028767 TgO08710 2766 aa9.34□□□□□ -0.91
Rtf1-201ENSMUST00000028767 Anapc11Q9CPX9 84 aa9.34□□□□□ -0.91
Rtf1-201ENSMUST00000028767 Csmd2V9GX34 3611 aa9.33□□□□□ -0.92
Rtf1-201ENSMUST00000028767 SvipQ3UZP4 77 aa9.33□□□□□ -0.92
Rtf1-201ENSMUST00000028767 H2al1aQ5M8Q2 105 aa9.32□□□□□ -0.92
Rtf1-201ENSMUST00000028767 Sprr1aQ62266 144 aa9.32□□□□□ -0.92
Rtf1-201ENSMUST00000028767 H2al1eQ810S6 105 aa9.32□□□□□ -0.92
Rtf1-201ENSMUST00000028767 Zcchc13Q9D548 170 aa9.31□□□□□ -0.92
Rtf1-201ENSMUST00000028767 Gm17349F7BGH6 99 aa9.3□□□□□ -0.92
Rtf1-201ENSMUST00000028767 AW011738F6S7Q2 159 aa9.29□□□□□ -0.92
Rtf1-201ENSMUST00000028767 Gm10337F7DEP7 55 aa9.29□□□□□ -0.92
Rtf1-201ENSMUST00000028767 Spaca4Q80ZQ0 127 aa9.28□□□□□ -0.92
Rtf1-201ENSMUST00000028767 Tenm1Q9WTS4 2731 aa9.27□□□□□ -0.93
Rtf1-201ENSMUST00000028767 Fbn1Q61554 2873 aaKnown RBP9.26□□□□□ -0.93
Rtf1-201ENSMUST00000028767 Gm10160F6Y577 67 aa9.25□□□□□ -0.93
Rtf1-201ENSMUST00000028767 Gm28374F6SG70 93 aa9.25□□□□□ -0.93
Rtf1-201ENSMUST00000028767 Spint4Q9D263 159 aa9.24□□□□□ -0.93
Rtf1-201ENSMUST00000028767 Coa5Q99M07 74 aa9.23□□□□□ -0.93
Rtf1-201ENSMUST00000028767 Gpr15lA0A0B4J1N3 78 aa9.22□□□□□ -0.93
Rtf1-201ENSMUST00000028767 Ndufs5Q99LY9 106 aa9.17□□□□□ -0.94
Rtf1-201ENSMUST00000028767 Sox16Q62247 57 aa9.16□□□□□ -0.94
Rtf1-201ENSMUST00000028767 Cdc42se1Q8BHL7 80 aa9.16□□□□□ -0.94
Rtf1-201ENSMUST00000028767 Gm9507D3Z5T3 223 aa9.14□□□□□ -0.95
Rtf1-201ENSMUST00000028767 Ndufb1P0DN34 57 aa9.13□□□□□ -0.95
Rtf1-201ENSMUST00000028767 6030445D17RikE9Q8F9 148 aa9.12□□□□□ -0.95
Rtf1-201ENSMUST00000028767 Gm10139O88245 57 aa9.12□□□□□ -0.95
Rtf1-201ENSMUST00000028767 Chtf8P0CG14 533 aa9.11□□□□□ -0.95
Rtf1-201ENSMUST00000028767 Col7a1Q63870 2944 aa9.11□□□□□ -0.95
Rtf1-201ENSMUST00000028767 9230102O04RikA2ASX7 82 aa9.11□□□□□ -0.95
Rtf1-201ENSMUST00000028767 Gm10999F6Q4M4 69 aa9.1□□□□□ -0.95
Rtf1-201ENSMUST00000028767 2310061N02RikQ9D6S9 174 aa9.1□□□□□ -0.95
Rtf1-201ENSMUST00000028767 Bean1Q9EQG5 255 aa9.1□□□□□ -0.95
Rtf1-201ENSMUST00000028767 Gm10065F6TJM2 114 aa9.09□□□□□ -0.95
Rtf1-201ENSMUST00000028767 RetnlbQ99P86 105 aa9.09□□□□□ -0.95
Rtf1-201ENSMUST00000028767 SmcpP15265 143 aa9.06□□□□□ -0.96
Rtf1-201ENSMUST00000028767 FcgbpE9Q0B5 2583 aa9.06□□□□□ -0.96
Rtf1-201ENSMUST00000028767 NbdyA0A0N4SUI7 68 aa9.04□□□□□ -0.96
Rtf1-201ENSMUST00000028767 Odf3bQ5M8M2 238 aa9.04□□□□□ -0.96
Rtf1-201ENSMUST00000028767 LystP97412 3788 aa9.04□□□□□ -0.96
Rtf1-201ENSMUST00000028767 Gm20661K7N787 53 aa9.04□□□□□ -0.96
Rtf1-201ENSMUST00000028767 CubnQ9JLB4 3623 aa9.03□□□□□ -0.96
Rtf1-201ENSMUST00000028767 Ank2Q8C8R3 3898 aa9.03□□□□□ -0.96
Rtf1-201ENSMUST00000028767 Cypt15B1AXS0 87 aa9.03□□□□□ -0.96
Rtf1-201ENSMUST00000028767 VwfQ8CIZ8 2813 aa9□□□□□ -0.97
Rtf1-201ENSMUST00000028767 Cypt14J3QPF7 87 aa8.99□□□□□ -0.97
Rtf1-201ENSMUST00000028767 Defb1P56386 69 aa8.98□□□□□ -0.97
Rtf1-201ENSMUST00000028767 Phxr4P15974 95 aa8.98□□□□□ -0.97
Rtf1-201ENSMUST00000028767 Sec61gP60060 68 aa8.97□□□□□ -0.97
Rtf1-201ENSMUST00000028767 Krtap10-4Q08EG8 221 aa8.97□□□□□ -0.97
Rtf1-201ENSMUST00000028767 Q8BGJ3 129 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms