RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Atox1O08997 68 aaKnown RBP7.78□□□□□ -1.16
Rfx1-201ENSMUST00000005600 1700018G05RikA0A1B0GSI2 66 aa7.78□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Sslp1Q3UN54 99 aa7.78□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Gm16181B0V2H2 73 aa7.77□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Cdc42se1Q8BHL7 80 aa7.77□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Phxr5P08399 672 aa7.76□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Prol1E9PYQ4 312 aa7.76□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Ccdc179J3QM76 67 aa7.76□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Gm21886J3QJU9 214 aa7.75□□□□□ -1.17
Rfx1-201ENSMUST00000005600 B9d2Q3UK10 175 aa7.74□□□□□ -1.17
Rfx1-201ENSMUST00000005600 A0A286YE49 62 aa7.73□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Igkv3-10A0A0G2JGN0 119 aa7.73□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Wfdc13Q5DQQ6 81 aa7.73□□□□□ -1.17
Rfx1-201ENSMUST00000005600 AI606181Q8C7B9 129 aa7.72□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Reg3aO09037 175 aa7.72□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Sprr1aQ62266 144 aa7.72□□□□□ -1.17
Rfx1-201ENSMUST00000005600 Coa5Q99M07 74 aa7.71□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Gm7138L7N2C3 230 aa7.7□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Gm3238W4VSP7 230 aa7.7□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Gm37013Q8K491 104 aa7.7□□□□□ -1.18
Rfx1-201ENSMUST00000005600 1700074P13RikQ9D9G7 251 aa7.69□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Stab1Q8R4Y4 2571 aa7.69□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Itpr2Q9Z329 2701 aa7.68□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Tenm1Q9WTS4 2731 aa7.68□□□□□ -1.18
Rfx1-201ENSMUST00000005600 U90926O08546 118 aa7.68□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Gm28230A0A0A0MQ91 144 aa7.67□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Ube2aQ9Z255 152 aa7.67□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Sox16Q62247 57 aa7.66□□□□□ -1.18
Rfx1-201ENSMUST00000005600 HrnrQ8VHD8 2496 aa7.66□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Nsd1O88491 2588 aaKnown RBP7.65□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Col6a5A6H584 2640 aa7.65□□□□□ -1.18
Rfx1-201ENSMUST00000005600 Fam104aA2A6P4 185 aa7.64□□□□□ -1.19
Rfx1-201ENSMUST00000005600 SycnQ8VCK7 134 aa7.64□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Hspg2Q05793 3707 aaKnown RBP7.64□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Fbn1Q61554 2873 aaKnown RBP7.64□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Chchd10Q7TNL9 138 aa7.63□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Tenm4Q3UHK6 2771 aa7.63□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Rpl37aP61514 92 aa7.63□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Gm20604F8WIA3 75 aa7.6□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Wfdc10Q3V2J9 124 aa7.6□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Zcchc13Q9D548 170 aa7.6□□□□□ -1.19
Rfx1-201ENSMUST00000005600 Igkv3-7A0A0G2JE31 119 aa7.58□□□□□ -1.2
Rfx1-201ENSMUST00000005600 4933415A04RikQ9D443 101 aa7.58□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Hivep1Q03172 2688 aa7.57□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Gm10267M0QWD8 85 aa7.57□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Igsf10Q3V1M1 2594 aa7.57□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Odf3bQ5M8M2 238 aa7.57□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Igkv3-5A0A140T8M6 119 aa7.56□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Phxr4P15974 95 aa7.55□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Gm10139O88245 57 aa7.55□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Srrm2Q8BTI8 2703 aaKnown RBP7.55□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Phf5aP83870 110 aaKnown RBP7.55□□□□□ -1.2
Rfx1-201ENSMUST00000005600 TgO08710 2766 aa7.55□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Defb10Q8R2I8 73 aa7.53□□□□□ -1.2
Rfx1-201ENSMUST00000005600 Gm7137J3QMW1 236 aa7.52□□□□□ -1.21
Rfx1-201ENSMUST00000005600 Chtf8P0CG14 533 aa7.52□□□□□ -1.21
Rfx1-201ENSMUST00000005600 Gm10837Q3UTT8 145 aa7.51□□□□□ -1.21
Rfx1-201ENSMUST00000005600 1700012A03RikQ9DAF1 130 aa7.5□□□□□ -1.21
Rfx1-201ENSMUST00000005600 Gm36176A0A1W2P8D5 158 aa7.49□□□□□ -1.21
Rfx1-201ENSMUST00000005600 SptssbQ925E8 76 aa7.49□□□□□ -1.21
Rfx1-201ENSMUST00000005600 Gm10160F6Y577 67 aa7.48□□□□□ -1.21
Rfx1-201ENSMUST00000005600 Defb38Q7TNV7 63 aa7.47□□□□□ -1.21
Rfx1-201ENSMUST00000005600 1700042G07RikB1AUF7 90 aa7.46□□□□□ -1.21
Rfx1-201ENSMUST00000005600 Q8K1L6 76 aa7.46□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Igkv3-3A0A140T8Q0 119 aa7.45□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Fn1P11276 2477 aaKnown RBP7.45□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Gm2310J3QNJ2 377 aa7.45□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Nupr2Q497P3 102 aa7.44□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Gm27235Q3UW50 83 aa7.43□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Gm26620Q9CY65 116 aa7.42□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Defb9Q8R2I6 67 aa7.42□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Gm10642Q3TWM1 71 aa7.41□□□□□ -1.22
Rfx1-201ENSMUST00000005600 Wfdc17Q5SSJ1 76 aa7.4□□□□□ -1.23
Rfx1-201ENSMUST00000005600 2310061N02RikQ9D6S9 174 aa7.39□□□□□ -1.23
Rfx1-201ENSMUST00000005600 AW011738F6S7Q2 159 aa7.38□□□□□ -1.23
Rfx1-201ENSMUST00000005600 Gm20661K7N787 53 aa7.38□□□□□ -1.23
Rfx1-201ENSMUST00000005600 Gm10643Q3URG9 111 aa7.37□□□□□ -1.23
Rfx1-201ENSMUST00000005600 6030445D17RikE9Q8F9 148 aa7.36□□□□□ -1.23
Rfx1-201ENSMUST00000005600 Ndufb1P0DN34 57 aa7.36□□□□□ -1.23
Rfx1-201ENSMUST00000005600 Gm3646F6S692 53 aa7.36□□□□□ -1.23
Rfx1-201ENSMUST00000005600 VwfQ8CIZ8 2813 aa7.33□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Gm9508A0A1W2P7W0 230 aa7.33□□□□□ -1.24
Rfx1-201ENSMUST00000005600 OxtP35454 125 aa7.33□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Stab2Q8R4U0 2559 aa7.33□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Znf706Q9D115 76 aaKnown RBP7.32□□□□□ -1.24
Rfx1-201ENSMUST00000005600 9530053A07RikE9PVG8 2581 aa7.32□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Ndufs5Q99LY9 106 aa7.32□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Kmt2aP55200 3966 aa7.31□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Pkd1l1Q8R526 2615 aa7.29□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Dnah3Q8BW94 4083 aa7.29□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Adm2Q7TNK8 150 aa7.29□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Plac8Q9JI48 112 aa7.28□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Gm4707V9GXN5 68 aa7.28□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Defb13Q8R2I4 64 aa7.28□□□□□ -1.24
Rfx1-201ENSMUST00000005600 Gm10065F6TJM2 114 aa7.26□□□□□ -1.25
Rfx1-201ENSMUST00000005600 Anapc11Q9CPX9 84 aa7.26□□□□□ -1.25
Rfx1-201ENSMUST00000005600 Spata3Q9D9T6 193 aa7.25□□□□□ -1.25
Rfx1-201ENSMUST00000005600 Dnah7bL7N1Y0 4068 aa7.24□□□□□ -1.25
Rfx1-201ENSMUST00000005600 Cypt14J3QPF7 87 aa7.24□□□□□ -1.25
Rfx1-201ENSMUST00000005600 Limd2Q8BGB5 128 aa7.22□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms