RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Sigmar1O55242 223 aa16.67■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Igkv4-58A0A0G2JGI6 119 aa16.66■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Wfdc6bF6ULY1 148 aa16.66■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Megf8P60882 2789 aa16.65■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Igkv3-2A0A075B5P0 119 aa16.65■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Cdip1Q9DB75 208 aa16.65■□□□□ 0.26
Tpm1-216ENSMUST00000113707 E130218I03RikA0A0U1RNU5 63 aa16.63■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Prol1E9PYQ4 312 aa16.61■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Cd164Q9R0L9 197 aa16.61■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Tenm2Q9WTS5 2764 aa16.61■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Nupr2Q497P3 102 aa16.61■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Gm9507D3Z5T3 223 aa16.6■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Elof1P60003 83 aa16.59■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Obox2E9PXV9 151 aa16.59■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Msrb1Q9JLC3 116 aa16.59■□□□□ 0.25
Tpm1-216ENSMUST00000113707 Gm7276Q3TYW4 209 aa16.58■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Fam168bQ80XQ8 194 aa16.58■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Gm9918Q8BUR5 174 aa16.57■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Muc6Q80T03 2850 aa16.57■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Igkv2-109A0A075B5K6 120 aa16.56■□□□□ 0.24
Tpm1-216ENSMUST00000113707 P84750 121 aa16.56■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Gm10837Q3UTT8 145 aa16.56■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Q9DAA7 145 aa16.56■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Fras1Q80T14 4010 aa16.56■□□□□ 0.24
Tpm1-216ENSMUST00000113707 BatfO35284 125 aa16.56■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Xcl1P47993 114 aa16.56■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Dmac1Q9CQ00 111 aa16.56■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Ntn5Q3UQ22 452 aa16.54■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Smim29Q8R043 75 aa16.54■□□□□ 0.24
Tpm1-216ENSMUST00000113707 PrkdcP97313 4128 aa16.54■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Fam19a1Q7TPG8 133 aa16.54■□□□□ 0.24
Tpm1-216ENSMUST00000113707 SycnQ8VCK7 134 aa16.54■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Ifitm6A0A1B0GS75 124 aa16.53■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Defa4P28311 92 aa16.52■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Znf414Q9DCK4 299 aa16.52■□□□□ 0.24
Tpm1-216ENSMUST00000113707 Gm7102J3QQ10 178 aa16.52■□□□□ 0.23
Tpm1-216ENSMUST00000113707 Lyrm7Q9DA03 104 aa16.52■□□□□ 0.23
Tpm1-216ENSMUST00000113707 PlecQ9QXS1 4691 aaKnown RBP16.51■□□□□ 0.23
Tpm1-216ENSMUST00000113707 Fam19a5Q91WE9 132 aa16.5■□□□□ 0.23
Tpm1-216ENSMUST00000113707 Cby1Q9D1C2 127 aa16.5■□□□□ 0.23
Tpm1-216ENSMUST00000113707 Ighv10-3A0A075B5T6 119 aa16.46■□□□□ 0.23
Tpm1-216ENSMUST00000113707 LbhQ9CX60 105 aa16.46■□□□□ 0.23
Tpm1-216ENSMUST00000113707 Igkv8-26A0A075B5N5 123 aa16.45■□□□□ 0.22
Tpm1-216ENSMUST00000113707 Trav14d-3-dv8A0A075B619 120 aa16.44■□□□□ 0.22
Tpm1-216ENSMUST00000113707 Zcchc13Q9D548 170 aa16.44■□□□□ 0.22
Tpm1-216ENSMUST00000113707 Dnah11E9Q7N9 4488 aa16.43■□□□□ 0.22
Tpm1-216ENSMUST00000113707 PkigO70139 76 aa16.42■□□□□ 0.22
Tpm1-216ENSMUST00000113707 Ly6g6cQ9Z1Q4 126 aa16.42■□□□□ 0.22
Tpm1-216ENSMUST00000113707 FasnP19096 2504 aaKnown RBP16.41■□□□□ 0.22
Tpm1-216ENSMUST00000113707 9530003J23RikQ8BM26 151 aa16.41■□□□□ 0.22
Tpm1-216ENSMUST00000113707 Gm11011D3Z3L9 86 aa16.4■□□□□ 0.22
Tpm1-216ENSMUST00000113707 1700012A03RikQ9DAF1 130 aa16.4■□□□□ 0.22
Tpm1-216ENSMUST00000113707 TgO08710 2766 aa16.38■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Lamtor3O88653 124 aa16.38■□□□□ 0.21
Tpm1-216ENSMUST00000113707 2310050C09RikG5E8Z3 280 aa16.37■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Defa23Q5G866 93 aa16.37■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Defb37Q7TMD2 62 aa16.36■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Plac8Q9JI48 112 aa16.36■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Igkv1-122A0A140T8M9 119 aa16.35■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Dnah9B1AR51 4484 aa16.34■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Defa27F2Z403 93 aa16.34■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Fam104aA2A6P4 185 aa16.33■□□□□ 0.21
Tpm1-216ENSMUST00000113707 U90926O08546 118 aa16.33■□□□□ 0.21
Tpm1-216ENSMUST00000113707 Igkv8-27A0A0G2JF28 120 aa16.33■□□□□ 0.2
Tpm1-216ENSMUST00000113707 Igkv8-30A0A140T8M3 121 aa16.33■□□□□ 0.2
Tpm1-216ENSMUST00000113707 PscaP57096 123 aa16.31■□□□□ 0.2
Tpm1-216ENSMUST00000113707 Tmem243B2RVB9 118 aa16.3■□□□□ 0.2
Tpm1-216ENSMUST00000113707 A930002H24RikQ8C8Y3 163 aa16.3■□□□□ 0.2
Tpm1-216ENSMUST00000113707 Ighv2-2A0A075B5P8 116 aa16.29■□□□□ 0.2
Tpm1-216ENSMUST00000113707 Ighv2-5A0A0A6YY69 116 aa16.29■□□□□ 0.2
Tpm1-216ENSMUST00000113707 P01821 116 aa16.29■□□□□ 0.2
Tpm1-216ENSMUST00000113707 Gm10065F6TJM2 114 aa16.27■□□□□ 0.2
Tpm1-216ENSMUST00000113707 Inafm2A0A1L1STD6 152 aa16.25■□□□□ 0.19
Tpm1-216ENSMUST00000113707 Phf5aP83870 110 aaKnown RBP16.22■□□□□ 0.19
Tpm1-216ENSMUST00000113707 A0A286YE02 88 aa16.21■□□□□ 0.19
Tpm1-216ENSMUST00000113707 Tmem213Q08EA8 116 aa16.21■□□□□ 0.19
Tpm1-216ENSMUST00000113707 Ormdl1Q921I0 153 aa16.21■□□□□ 0.19
Tpm1-216ENSMUST00000113707 Pde6gP09174 87 aa16.2■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Ube2bP63147 152 aa16.2■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Rbm3O89086 153 aaKnown RBP16.2■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Vpreb2P13373 142 aa16.18■□□□□ 0.18
Tpm1-216ENSMUST00000113707 A830005F24RikQ8BRT5 167 aa16.18■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Gm17521F6QAC8 156 aa16.17■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Krtap29-1A2A5X4 342 aa16.16■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Sfta2E9PXB6 77 aa16.16■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Wfdc10Q3V2J9 124 aa16.16■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Defb9Q8R2I6 67 aa16.16■□□□□ 0.18
Tpm1-216ENSMUST00000113707 A730071L15RikQ8C4X0 137 aa16.15■□□□□ 0.18
Tpm1-216ENSMUST00000113707 Vpreb3D3Z6J4 130 aa16.12■□□□□ 0.17
Tpm1-216ENSMUST00000113707 OxtP35454 125 aa16.12■□□□□ 0.17
Tpm1-216ENSMUST00000113707 Gm37389A0A0A6YW05 95 aa16.1■□□□□ 0.17
Tpm1-216ENSMUST00000113707 Vpreb1P13372 142 aa16.1■□□□□ 0.17
Tpm1-216ENSMUST00000113707 Defa7P50705 93 aa16.09■□□□□ 0.17
Tpm1-216ENSMUST00000113707 Atp5eP56382 52 aa16.09■□□□□ 0.17
Tpm1-216ENSMUST00000113707 Igkv8-28A0A0G2JE47 121 aa16.08■□□□□ 0.17
Tpm1-216ENSMUST00000113707 Gm10308Q9CVR5 141 aa16.08■□□□□ 0.17
Tpm1-216ENSMUST00000113707 Cox6a2P43023 97 aa16.07■□□□□ 0.16
Tpm1-216ENSMUST00000113707 AI606181Q8C7B9 129 aa16.07■□□□□ 0.16
Tpm1-216ENSMUST00000113707 Anapc13Q8R034 74 aa16.07■□□□□ 0.16
Tpm1-216ENSMUST00000113707 Dnah7aE9Q0T8 4024 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 148.5 ms