RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Pou2af1Q64693 256 aa9.13□□□□□ -0.95
Clcn3-204ENSMUST00000110301 B230307C23RikQ8BLB2 64 aa9.13□□□□□ -0.95
Clcn3-204ENSMUST00000110301 EnhoQ8K1D8 76 aa9.13□□□□□ -0.95
Clcn3-204ENSMUST00000110301 A730009L09RikA0A1B0GS82 72 aa9.12□□□□□ -0.95
Clcn3-204ENSMUST00000110301 5730596B20RikQ8BQ08 205 aa9.12□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Rps28P62858 69 aaKnown RBP9.11□□□□□ -0.95
Clcn3-204ENSMUST00000110301 OtogO55225 2910 aa9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Igf1P05017 153 aa9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Helz2E9QAM5 2947 aaKnown RBP9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Ighv10-1A0A0B4J1J6 119 aa9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Wfdc13Q5DQQ6 81 aa9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Gm17509Q9CZ61 145 aa9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Ighv1-56A0A0A6YXG2 117 aa9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Rpl28P41105 137 aaKnown RBP9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Cox7bP56393 80 aa9.1□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Gm11213A0A1B0GR83 88 aa9.09□□□□□ -0.95
Clcn3-204ENSMUST00000110301 4930518I15RikQ3V2W7 57 aa9.09□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Defb11Q8R2I7 77 aa9.09□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Gm10401E9Q3K6 71 aa9.09□□□□□ -0.95
Clcn3-204ENSMUST00000110301 4930524J08RikQ9CUJ5 163 aa9.09□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Defa27F2Z403 93 aa9.08□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Gm10549Q3URY4 149 aa9.08□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Igkv3-5A0A140T8M6 119 aa9.08□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Rbm3O89086 153 aaKnown RBP9.08□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Igkv3-10A0A0G2JGN0 119 aa9.07□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Ormdl1Q921I0 153 aa9.07□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Srrm2Q8BTI8 2703 aaKnown RBP9.07□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Tcl1b5P56845 121 aa9.07□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Muc4Q8JZM8 3443 aa9.07□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Krtap11-1E9Q2E9 183 aa9.07□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Gm5153P01627 120 aa9.06□□□□□ -0.96
Clcn3-204ENSMUST00000110301 H2al1bA0A087WP11 105 aa9.06□□□□□ -0.96
Clcn3-204ENSMUST00000110301 6430550D23RikE9Q1X6 194 aa9.06□□□□□ -0.96
Clcn3-204ENSMUST00000110301 H2al1kJ3QP08 105 aa9.06□□□□□ -0.96
Clcn3-204ENSMUST00000110301 H2al1eQ810S6 105 aa9.06□□□□□ -0.96
Clcn3-204ENSMUST00000110301 H2al1mQ9DAD9 105 aa9.06□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Gm17521F6QAC8 156 aa9.06□□□□□ -0.96
Clcn3-204ENSMUST00000110301 AplnQ9R0R4 77 aa9.06□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Tmem258P61166 79 aa9.05□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Wfdc10Q3V2J9 124 aa9.04□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Gm11011D3Z3L9 86 aa9.03□□□□□ -0.96
Clcn3-204ENSMUST00000110301 TeppQ6IMH0 216 aa9.03□□□□□ -0.96
Clcn3-204ENSMUST00000110301 1810062G17RikG3X8Y2 129 aa9.02□□□□□ -0.96
Clcn3-204ENSMUST00000110301 A830005F24RikQ8BRT5 167 aa9.02□□□□□ -0.96
Clcn3-204ENSMUST00000110301 Gm10845Q3UNY9 185 aa9.02□□□□□ -0.97
Clcn3-204ENSMUST00000110301 9530003J23RikQ8BM26 151 aa9.02□□□□□ -0.97
Clcn3-204ENSMUST00000110301 1600014C23RikQ9DAX4 101 aa9.02□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Cd164Q9R0L9 197 aa9.01□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Eif4ebp3Q80VV3 101 aa9.01□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Defb37Q7TMD2 62 aa9□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Phxr5P08399 672 aa9□□□□□ -0.97
Clcn3-204ENSMUST00000110301 4930519P11RikQ9CUJ8 166 aa9□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Gm19935A0A1B0GSF9 52 aa8.99□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Defb40Q70KL2 73 aa8.99□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Smr3aQ61900 147 aa8.98□□□□□ -0.97
Clcn3-204ENSMUST00000110301 GhrhP16043 103 aa8.98□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Psors1c2Q80ZC9 134 aa8.98□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Tmem254aP0DN89 123 aa8.97□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Tmem254bP0DN90 123 aa8.97□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Tmem254cP0DN91 123 aa8.97□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Defb50Q6TU36 73 aa8.97□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Igkv3-12A0A140T8P0 119 aa8.96□□□□□ -0.97
Clcn3-204ENSMUST00000110301 Ifitm6A0A1B0GS75 124 aa8.95□□□□□ -0.98
Clcn3-204ENSMUST00000110301 FcgbpE9Q0B5 2583 aa8.95□□□□□ -0.98
Clcn3-204ENSMUST00000110301 Pde6gP09174 87 aa8.95□□□□□ -0.98
Clcn3-204ENSMUST00000110301 BikO70337 150 aa8.92□□□□□ -0.98
Clcn3-204ENSMUST00000110301 Gm10837Q3UTT8 145 aa8.92□□□□□ -0.98
Clcn3-204ENSMUST00000110301 Adm2Q7TNK8 150 aa8.92□□□□□ -0.98
Clcn3-204ENSMUST00000110301 Wfdc6bF6ULY1 148 aa8.92□□□□□ -0.98
Clcn3-204ENSMUST00000110301 Gm12353A2AGJ4 60 aa8.91□□□□□ -0.98
Clcn3-204ENSMUST00000110301 ApcQ61315 2845 aa8.9□□□□□ -0.98
Clcn3-204ENSMUST00000110301 Msrb1Q9JLC3 116 aa8.9□□□□□ -0.98
Clcn3-204ENSMUST00000110301 SnurfQ9WU12 71 aa8.9□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Sprr1bQ62267 153 aa8.89□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Sprr4Q8CGN8 76 aa8.89□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Q9DAA7 145 aa8.89□□□□□ -0.99
Clcn3-204ENSMUST00000110301 C530025M09RikF6RGA8 229 aa8.89□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Ighv10-3A0A075B5T6 119 aa8.89□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Prr15lQ8JZM2 100 aa8.89□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Fam168bQ80XQ8 194 aa8.88□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Gm11627A6PWP4 55 aa8.87□□□□□ -0.99
Clcn3-204ENSMUST00000110301 P01819 144 aa8.87□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Defb12Q8K4N3 78 aa8.87□□□□□ -0.99
Clcn3-204ENSMUST00000110301 2310034G01RikA0A286YDL3 209 aa8.86□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Cmya5Q70KF4 3739 aa8.86□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Gm9508A0A1W2P7W0 230 aa8.86□□□□□ -0.99
Clcn3-204ENSMUST00000110301 P06320 134 aa8.86□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Igkv3-4A0A140T8Q4 119 aa8.85□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Gm9903Q8C9Y8 129 aa8.85□□□□□ -0.99
Clcn3-204ENSMUST00000110301 Phf5aP83870 110 aaKnown RBP8.83□□□□□ -1
Clcn3-204ENSMUST00000110301 OxtP35454 125 aa8.82□□□□□ -1
Clcn3-204ENSMUST00000110301 Q8K1L6 76 aa8.82□□□□□ -1
Clcn3-204ENSMUST00000110301 A530084C06RikQ3UTW2 186 aa8.81□□□□□ -1
Clcn3-204ENSMUST00000110301 Serp2Q6TAW2 65 aa8.81□□□□□ -1
Clcn3-204ENSMUST00000110301 AY074887Q8R5F9 132 aa8.81□□□□□ -1
Clcn3-204ENSMUST00000110301 Plac8Q9JI48 112 aa8.81□□□□□ -1
Clcn3-204ENSMUST00000110301 Gm17349F7BGH6 99 aa8.81□□□□□ -1
Clcn3-204ENSMUST00000110301 Dmac1Q9CQ00 111 aa8.8□□□□□ -1
Clcn3-204ENSMUST00000110301 Serp1Q9Z1W5 66 aa8.8□□□□□ -1
Clcn3-204ENSMUST00000110301 Gm10642Q3TWM1 71 aa8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 103.1 ms