RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Ptpn13Q64512 2453 aa7.43□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Ankrd17Q99NH0 2603 aaKnown RBP7.43□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Gm10160F6Y577 67 aa7.42□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Cep192E9Q4Y4 2514 aaKnown RBP7.42□□□□□ -1.22
Scn8a-203ENSMUST00000108908 TrrapQ80YV3 2565 aaKnown RBP7.42□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Notch2O35516 2470 aa7.42□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Bod1lE9Q6J5 3032 aa7.42□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Ighv2-2A0A075B5P8 116 aa7.42□□□□□ -1.22
Scn8a-203ENSMUST00000108908 P01821 116 aa7.42□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Defb1P56386 69 aa7.41□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Prol1E9PYQ4 312 aa7.41□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Col12a1Q60847 3120 aa7.4□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Mki67E9PVX6 3177 aaKnown RBP7.39□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Gm27235Q3UW50 83 aa7.39□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Psors1c2Q80ZC9 134 aa7.39□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Gm10197F6QEY5 67 aa7.39□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Q8BT88 171 aa7.38□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Cdh23Q99PF4 3354 aa7.38□□□□□ -1.23
Scn8a-203ENSMUST00000108908 A930002H24RikQ8C8Y3 163 aa7.38□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Epg5Q80TA9 2572 aa7.37□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Gm17689B3GLJ4 109 aa7.36□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Spint4Q9D263 159 aa7.35□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Lypd5Q9D7Z7 256 aa7.35□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Sprr4Q8CGN8 76 aa7.35□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Eif4ebp3Q80VV3 101 aa7.34□□□□□ -1.23
Scn8a-203ENSMUST00000108908 Gm10308Q9CVR5 141 aa7.32□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Zfp292Q9Z2U2 2698 aa7.32□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Gm20661K7N787 53 aa7.3□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Gm7138L7N2C3 230 aa7.3□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Gm3238W4VSP7 230 aa7.3□□□□□ -1.24
Scn8a-203ENSMUST00000108908 MtorQ9JLN9 2549 aa7.3□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Lelp1Q9DAE3 120 aa7.3□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Rev3lQ61493 3122 aa7.3□□□□□ -1.24
Scn8a-203ENSMUST00000108908 C530025M09RikF6RGA8 229 aa7.3□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Lama2Q60675 3118 aaKnown RBP7.29□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Sprr1bQ62267 153 aa7.29□□□□□ -1.24
Scn8a-203ENSMUST00000108908 AY074887Q8R5F9 132 aa7.29□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Ranbp2Q9ERU9 3053 aaKnown RBP7.29□□□□□ -1.24
Scn8a-203ENSMUST00000108908 A530084C06RikQ3UTW2 186 aa7.28□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Defb9Q8R2I6 67 aa7.28□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Bahcc1Q3UHR0 2643 aa7.28□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Setd2E9Q5F9 2537 aa7.28□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Krtap16-1A2A5X5 502 aa7.28□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Gm12216A0A1W2P827 62 aa7.28□□□□□ -1.24
Scn8a-203ENSMUST00000108908 4930507D05RikQ8C9C9 103 aa7.28□□□□□ -1.24
Scn8a-203ENSMUST00000108908 Q8BGJ3 129 aa7.27□□□□□ -1.25
Scn8a-203ENSMUST00000108908 Plac8Q9JI48 112 aa7.26□□□□□ -1.25
Scn8a-203ENSMUST00000108908 Anapc11Q9CPX9 84 aa7.25□□□□□ -1.25
Scn8a-203ENSMUST00000108908 Abca12E9Q876 2595 aa7.24□□□□□ -1.25
Scn8a-203ENSMUST00000108908 7530416G11RikJ3QJX6 159 aa7.24□□□□□ -1.25
Scn8a-203ENSMUST00000108908 Gm7173A0A0G2JEB6 3132 aa7.23□□□□□ -1.25
Scn8a-203ENSMUST00000108908 AW011738F6S7Q2 159 aa7.22□□□□□ -1.25
Scn8a-203ENSMUST00000108908 Gm7137J3QMW1 236 aa7.22□□□□□ -1.25
Scn8a-203ENSMUST00000108908 Coa5Q99M07 74 aa7.21□□□□□ -1.26
Scn8a-203ENSMUST00000108908 Prr13Q9CQJ5 137 aa7.21□□□□□ -1.26
Scn8a-203ENSMUST00000108908 A330070K13RikQ8CA53 115 aa7.19□□□□□ -1.26
Scn8a-203ENSMUST00000108908 HttP42859 3119 aa7.19□□□□□ -1.26
Scn8a-203ENSMUST00000108908 Gm7276Q3TYW4 209 aa7.18□□□□□ -1.26
Scn8a-203ENSMUST00000108908 Limd2Q8BGB5 128 aa7.18□□□□□ -1.26
Scn8a-203ENSMUST00000108908 OxtP35454 125 aa7.17□□□□□ -1.26
Scn8a-203ENSMUST00000108908 Rps28P62858 69 aaKnown RBP7.16□□□□□ -1.26
Scn8a-203ENSMUST00000108908 PolqQ8CGS6 2544 aa7.15□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Gm9195A0A140LHT4 2805 aa7.14□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Phxr5P08399 672 aa7.13□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Celsr3Q91ZI0 3301 aa7.13□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Szt2A2A9C3 3431 aa7.12□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Gm11213A0A1B0GR83 88 aa7.12□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Unc79Q0KK59 2596 aa7.11□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Smim29Q8R043 75 aa7.11□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Cypt15B1AXS0 87 aa7.1□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Unc80Q8BLN6 3261 aa7.1□□□□□ -1.27
Scn8a-203ENSMUST00000108908 CnbpP53996 178 aaKnown RBP7.1□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Chd7A2AJK6 2986 aaKnown RBP7.09□□□□□ -1.27
Scn8a-203ENSMUST00000108908 Fam104aA2A6P4 185 aa7.08□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Tnrc18Q80WC3 2878 aa7.08□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Prrc2cQ3TLH4 2846 aaKnown RBP7.08□□□□□ -1.28
Scn8a-203ENSMUST00000108908 CicQ924A2 2510 aa7.07□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Cdc42se1Q8BHL7 80 aa7.07□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Rnase13Q5GAM7 153 aa7.06□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Gm11565A2A4M7 156 aa7.06□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Nsd1O88491 2588 aaKnown RBP7.05□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Vps13aQ5H8C4 3166 aa7.05□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Zcchc13Q9D548 170 aa7.05□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Cfap54Q8C6S9 3106 aa7.04□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Fam229bQ8CF36 80 aa7.03□□□□□ -1.28
Scn8a-203ENSMUST00000108908 Nbeal1E9PYP2 2688 aa7.01□□□□□ -1.29
Scn8a-203ENSMUST00000108908 MgaA2AWL7 3003 aaKnown RBP7.01□□□□□ -1.29
Scn8a-203ENSMUST00000108908 FlnaQ8BTM8 2647 aaKnown RBP7□□□□□ -1.29
Scn8a-203ENSMUST00000108908 AtmQ62388 3066 aa7□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Phxr4P15974 95 aa7□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Gm36176A0A1W2P8D5 158 aa6.99□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Usp24B1AY13 2617 aaKnown RBP6.99□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Gm26620Q9CY65 116 aa6.99□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Chtf8P0CG14 533 aa6.99□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Mp68P56379 58 aa6.98□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Gm9508A0A1W2P7W0 230 aa6.97□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Dmxl1Q6PNC0 3013 aa6.97□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Uqcr11Q9CPX8 56 aa6.97□□□□□ -1.29
Scn8a-203ENSMUST00000108908 Frem2Q6NVD0 3160 aa6.96□□□□□ -1.29
Scn8a-203ENSMUST00000108908 NbdyA0A0N4SUI7 68 aa6.96□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 162.9 ms