RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Hcfc1Q61191 2045 aaKnown RBP4.68□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Zcchc13Q9D548 170 aa4.68□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Defb38Q7TNV7 63 aa4.68□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Gm10160F6Y577 67 aa4.68□□□□□ -1.66
Scn1a-202ENSMUST00000094951 1700018G05RikA0A1B0GSI2 66 aa4.67□□□□□ -1.66
Scn1a-202ENSMUST00000094951 A330070K13RikQ8CA53 115 aa4.67□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Gm5617Q91VN2 117 aa4.67□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Phxr5P08399 672 aa4.67□□□□□ -1.66
Scn1a-202ENSMUST00000094951 4930518I15RikQ3V2W7 57 aa4.67□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Arhgap32Q811P8 2089 aa4.66□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Gm10320E9PW43 113 aa4.66□□□□□ -1.66
Scn1a-202ENSMUST00000094951 A930002H24RikQ8C8Y3 163 aa4.65□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Lypd5Q9D7Z7 256 aa4.65□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Sec61bQ9CQS8 96 aaKnown RBP4.65□□□□□ -1.67
Scn1a-202ENSMUST00000094951 NbdyA0A0N4SUI7 68 aa4.64□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Abca12E9Q876 2595 aa4.64□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Gm12216A0A1W2P827 62 aa4.64□□□□□ -1.67
Scn1a-202ENSMUST00000094951 SnurfQ9WU12 71 aa4.64□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Sostdc1Q9CQN4 206 aa4.64□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Rps28P62858 69 aaKnown RBP4.63□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Gm7276Q3TYW4 209 aa4.63□□□□□ -1.67
Scn1a-202ENSMUST00000094951 FasnP19096 2504 aaKnown RBP4.63□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Ankrd11E9Q4F7 2643 aa4.63□□□□□ -1.67
Scn1a-202ENSMUST00000094951 CicQ924A2 2510 aa4.63□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Cep192E9Q4Y4 2514 aaKnown RBP4.63□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Defb9Q8R2I6 67 aa4.63□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Bahcc1Q3UHR0 2643 aa4.63□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Krtap16-1A2A5X5 502 aa4.62□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Cypt15B1AXS0 87 aa4.62□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Defb37Q7TMD2 62 aa4.62□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Gm10999F6Q4M4 69 aa4.62□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Chtf8P0CG14 533 aa4.62□□□□□ -1.67
Scn1a-202ENSMUST00000094951 AY074887Q8R5F9 132 aa4.62□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Prr13Q9CQJ5 137 aa4.62□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Fam229aB2KGE5 128 aa4.62□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Gm10197F6QEY5 67 aa4.61□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Gm10308Q9CVR5 141 aa4.61□□□□□ -1.67
Scn1a-202ENSMUST00000094951 SrcapA0A087WQ44 3271 aa4.61□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Q8BT88 171 aa4.61□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Gm44790A0A0N4SV91 103 aa4.6□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Cypt14J3QPF7 87 aa4.6□□□□□ -1.67
Scn1a-202ENSMUST00000094951 Gm10770F7D043 238 aa4.58□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Krtap11-1E9Q2E9 183 aa4.58□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Plac8Q9JI48 112 aa4.58□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Odf3bQ5M8M2 238 aa4.56□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Usp9yF8VPU6 2556 aa4.56□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Fam168bQ80XQ8 194 aa4.55□□□□□ -1.68
Scn1a-202ENSMUST00000094951 AI854703Q8BIN3 203 aa4.54□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Piezo2Q8CD54 2822 aa4.54□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Myo18bE9PV66 2605 aa4.53□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Gm17349F7BGH6 99 aa4.53□□□□□ -1.68
Scn1a-202ENSMUST00000094951 Gm20661K7N787 53 aa4.53□□□□□ -1.68
Scn1a-202ENSMUST00000094951 A530084C06RikQ3UTW2 186 aa4.52□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Golgb1E9PVZ8 3238 aa4.52□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Cdc42se1Q8BHL7 80 aa4.51□□□□□ -1.69
Scn1a-202ENSMUST00000094951 AtrQ9JKK8 2635 aa4.5□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Pla2g10Q9QXX3 151 aa4.5□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Coa5Q99M07 74 aa4.49□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Uqcr11Q9CPX8 56 aa4.48□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Gm3233E9Q2H5 230 aa4.47□□□□□ -1.69
Scn1a-202ENSMUST00000094951 7530416G11RikJ3QJX6 159 aa4.47□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Akap13E9Q394 2776 aa4.47□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Alms1Q8K4E0 3251 aa4.47□□□□□ -1.69
Scn1a-202ENSMUST00000094951 C530025M09RikF6RGA8 229 aa4.46□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Gm10643Q3URG9 111 aa4.46□□□□□ -1.69
Scn1a-202ENSMUST00000094951 Mp68P56379 58 aa4.46□□□□□ -1.7
Scn1a-202ENSMUST00000094951 Phxr4P15974 95 aa4.46□□□□□ -1.7
Scn1a-202ENSMUST00000094951 Hectd1Q69ZR2 2618 aaKnown RBP4.46□□□□□ -1.7
Scn1a-202ENSMUST00000094951 Gm5767A0A0J9YTU8 78 aa4.43□□□□□ -1.7
Scn1a-202ENSMUST00000094951 Eif4ebp3Q80VV3 101 aa4.41□□□□□ -1.7
Scn1a-202ENSMUST00000094951 Defb1P56386 69 aa4.41□□□□□ -1.7
Scn1a-202ENSMUST00000094951 Rps29P62274 56 aa4.4□□□□□ -1.7
Scn1a-202ENSMUST00000094951 Spink7Q6IE32 76 aa4.4□□□□□ -1.7
Scn1a-202ENSMUST00000094951 FlnaQ8BTM8 2647 aaKnown RBP4.4□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Notch1Q01705 2531 aa4.39□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Gm7138L7N2C3 230 aa4.38□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Gm3238W4VSP7 230 aa4.38□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Anapc11Q9CPX9 84 aa4.38□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Krtap29-1A2A5X4 342 aa4.38□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Zfp292Q9Z2U2 2698 aa4.37□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Gm9955Q8CEJ8 102 aa4.37□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Sprr1aQ62266 144 aa4.37□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Krtap15-1Q9QZU5 150 aa4.35□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Lelp1Q9DAE3 120 aa4.35□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Usp24B1AY13 2617 aaKnown RBP4.35□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Nbeal1E9PYP2 2688 aa4.34□□□□□ -1.71
Scn1a-202ENSMUST00000094951 Gm10139O88245 57 aa4.34□□□□□ -1.71
Scn1a-202ENSMUST00000094951 2310034C09RikQ9D746 214 aa4.33□□□□□ -1.72
Scn1a-202ENSMUST00000094951 6030445D17RikE9Q8F9 148 aa4.33□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Igsf10Q3V1M1 2594 aa4.33□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Gm4491E0CX42 125 aa4.33□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Gm21798J3QNU5 87 aa4.33□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Gm16253D3Z167 63 aa4.31□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Fn1P11276 2477 aaKnown RBP4.31□□□□□ -1.72
Scn1a-202ENSMUST00000094951 UtrnE9Q6R7 3430 aa4.31□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Gm7137J3QMW1 236 aa4.31□□□□□ -1.72
Scn1a-202ENSMUST00000094951 CriptO70333 101 aa4.3□□□□□ -1.72
Scn1a-202ENSMUST00000094951 SmcpP15265 143 aa4.3□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Gm36176A0A1W2P8D5 158 aa4.3□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Gm19426M0QWC7 77 aa4.3□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 101.3 ms