RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 1810062G17RikG3X8Y2 129 aa14,45□□□□□ -0,1
Smarcc1-201ENSMUST00000088716 Gm20661K7N787 53 aa14,43□□□□□ -0,1
Smarcc1-201ENSMUST00000088716 Rps28P62858 69 aaKnown RBP14,43□□□□□ -0,1
Smarcc1-201ENSMUST00000088716 Gm17689B3GLJ4 109 aa14,42□□□□□ -0,1
Smarcc1-201ENSMUST00000088716 Q8BGJ3 129 aa14,42□□□□□ -0,1
Smarcc1-201ENSMUST00000088716 Zfp462B1AWL2 2495 aaKnown RBP14,41□□□□□ -0,1
Smarcc1-201ENSMUST00000088716 PtprqP0C5E4 2300 aa14,41□□□□□ -0,1
Smarcc1-201ENSMUST00000088716 Sprr4Q8CGN8 76 aa14,4□□□□□ -0,1
Smarcc1-201ENSMUST00000088716 Defb1P56386 69 aa14,37□□□□□ -0,11
Smarcc1-201ENSMUST00000088716 Hcfc1Q61191 2045 aaKnown RBP14,36□□□□□ -0,11
Smarcc1-201ENSMUST00000088716 AW011738F6S7Q2 159 aa14,32□□□□□ -0,12
Smarcc1-201ENSMUST00000088716 AY074887Q8R5F9 132 aa14,31□□□□□ -0,12
Smarcc1-201ENSMUST00000088716 Coa5Q99M07 74 aa14,29□□□□□ -0,12
Smarcc1-201ENSMUST00000088716 7530416G11RikJ3QJX6 159 aa14,29□□□□□ -0,12
Smarcc1-201ENSMUST00000088716 Lypd5Q9D7Z7 256 aa14,26□□□□□ -0,13
Smarcc1-201ENSMUST00000088716 Setd2E9Q5F9 2537 aa14,26□□□□□ -0,13
Smarcc1-201ENSMUST00000088716 Sprr1bQ62267 153 aa14,25□□□□□ -0,13
Smarcc1-201ENSMUST00000088716 Eif4ebp3Q80VV3 101 aa14,25□□□□□ -0,13
Smarcc1-201ENSMUST00000088716 Bahcc1Q3UHR0 2643 aa14,24□□□□□ -0,13
Smarcc1-201ENSMUST00000088716 MtorQ9JLN9 2549 aa14,23□□□□□ -0,13
Smarcc1-201ENSMUST00000088716 Epg5Q80TA9 2572 aa14,23□□□□□ -0,13
Smarcc1-201ENSMUST00000088716 Cdc42se1Q8BHL7 80 aa14,19□□□□□ -0,14
Smarcc1-201ENSMUST00000088716 Gm7276Q3TYW4 209 aa14,16□□□□□ -0,14
Smarcc1-201ENSMUST00000088716 PolqQ8CGS6 2544 aa14,16□□□□□ -0,14
Smarcc1-201ENSMUST00000088716 Mp68P56379 58 aa14,14□□□□□ -0,15
Smarcc1-201ENSMUST00000088716 Prr13Q9CQJ5 137 aa14,14□□□□□ -0,15
Smarcc1-201ENSMUST00000088716 C530025M09RikF6RGA8 229 aa14,14□□□□□ -0,15
Smarcc1-201ENSMUST00000088716 Defb9Q8R2I6 67 aa14,14□□□□□ -0,15
Smarcc1-201ENSMUST00000088716 Cep192E9Q4Y4 2514 aaKnown RBP14,13□□□□□ -0,15
Smarcc1-201ENSMUST00000088716 Cypt15B1AXS0 87 aa14,09□□□□□ -0,15
Smarcc1-201ENSMUST00000088716 A330070K13RikQ8CA53 115 aa14,08□□□□□ -0,16
Smarcc1-201ENSMUST00000088716 Phxr4P15974 95 aa14,05□□□□□ -0,16
Smarcc1-201ENSMUST00000088716 Gm3233E9Q2H5 230 aa14,05□□□□□ -0,16
Smarcc1-201ENSMUST00000088716 Plac8Q9JI48 112 aa14,02□□□□□ -0,17
Smarcc1-201ENSMUST00000088716 Gm11213A0A1B0GR83 88 aa14,01□□□□□ -0,17
Smarcc1-201ENSMUST00000088716 OxtP35454 125 aa14,01□□□□□ -0,17
Smarcc1-201ENSMUST00000088716 Uqcr11Q9CPX8 56 aa14□□□□□ -0,17
Smarcc1-201ENSMUST00000088716 Phxr5P08399 672 aa14□□□□□ -0,17
Smarcc1-201ENSMUST00000088716 Anapc11Q9CPX9 84 aa13,99□□□□□ -0,17
Smarcc1-201ENSMUST00000088716 Rnase13Q5GAM7 153 aa13,98□□□□□ -0,17
Smarcc1-201ENSMUST00000088716 CnbpP53996 178 aaKnown RBP13,97□□□□□ -0,17
Smarcc1-201ENSMUST00000088716 Abca12E9Q876 2595 aa13,95□□□□□ -0,18
Smarcc1-201ENSMUST00000088716 Fam104aA2A6P4 185 aa13,94□□□□□ -0,18
Smarcc1-201ENSMUST00000088716 Unc79Q0KK59 2596 aa13,9□□□□□ -0,18
Smarcc1-201ENSMUST00000088716 Zcchc13Q9D548 170 aa13,9□□□□□ -0,18
Smarcc1-201ENSMUST00000088716 Gm26620Q9CY65 116 aa13,89□□□□□ -0,19
Smarcc1-201ENSMUST00000088716 Ankrd17Q99NH0 2603 aaKnown RBP13,87□□□□□ -0,19
Smarcc1-201ENSMUST00000088716 Chtf8P0CG14 533 aa13,81□□□□□ -0,2
Smarcc1-201ENSMUST00000088716 CicQ924A2 2510 aa13,78□□□□□ -0,2
Smarcc1-201ENSMUST00000088716 Gm20538F6Z9R1 75 aa13,75□□□□□ -0,21
Smarcc1-201ENSMUST00000088716 Cypt14J3QPF7 87 aa13,73□□□□□ -0,21
Smarcc1-201ENSMUST00000088716 Gm7138L7N2C3 230 aa13,73□□□□□ -0,21
Smarcc1-201ENSMUST00000088716 Gm10643Q3URG9 111 aa13,73□□□□□ -0,21
Smarcc1-201ENSMUST00000088716 Gm3238W4VSP7 230 aa13,73□□□□□ -0,21
Smarcc1-201ENSMUST00000088716 2310034C09RikQ9D746 214 aa13,7□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Fam229bQ8CF36 80 aa13,69□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Usp9yF8VPU6 2556 aa13,69□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Gm11565A2A4M7 156 aa13,68□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Lelp1Q9DAE3 120 aa13,68□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 NbdyA0A0N4SUI7 68 aa13,68□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Gm21798J3QNU5 87 aa13,67□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Smim29Q8R043 75 aa13,67□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Zfp292Q9Z2U2 2698 aa13,67□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Myo18bE9PV66 2605 aa13,65□□□□□ -0,22
Smarcc1-201ENSMUST00000088716 Gm10065F6TJM2 114 aa13,62□□□□□ -0,23
Smarcc1-201ENSMUST00000088716 Nbeal1E9PYP2 2688 aa13,61□□□□□ -0,23
Smarcc1-201ENSMUST00000088716 Gm9821Q8K076 103 aa13,6□□□□□ -0,23
Smarcc1-201ENSMUST00000088716 Pla2g10Q9QXX3 151 aa13,6□□□□□ -0,23
Smarcc1-201ENSMUST00000088716 Gm7137J3QMW1 236 aa13,56□□□□□ -0,24
Smarcc1-201ENSMUST00000088716 CriptO70333 101 aa13,51□□□□□ -0,25
Smarcc1-201ENSMUST00000088716 CenpfE9Q3P4 2997 aaKnown RBP13,5□□□□□ -0,25
Smarcc1-201ENSMUST00000088716 6030445D17RikE9Q8F9 148 aa13,48□□□□□ -0,25
Smarcc1-201ENSMUST00000088716 Gm9955Q8CEJ8 102 aa13,45□□□□□ -0,26
Smarcc1-201ENSMUST00000088716 Gm10320E9PW43 113 aa13,45□□□□□ -0,26
Smarcc1-201ENSMUST00000088716 Gm4491E0CX42 125 aa13,43□□□□□ -0,26
Smarcc1-201ENSMUST00000088716 Ankrd11E9Q4F7 2643 aa13,4□□□□□ -0,27
Smarcc1-201ENSMUST00000088716 Nsd1O88491 2588 aaKnown RBP13,39□□□□□ -0,27
Smarcc1-201ENSMUST00000088716 Gm3880A0A1B0GSB3 72 aa13,38□□□□□ -0,27
Smarcc1-201ENSMUST00000088716 Gm10139O88245 57 aa13,35□□□□□ -0,27
Smarcc1-201ENSMUST00000088716 Spink7Q6IE32 76 aa13,35□□□□□ -0,27
Smarcc1-201ENSMUST00000088716 Odf3bQ5M8M2 238 aa13,34□□□□□ -0,27
Smarcc1-201ENSMUST00000088716 FasnP19096 2504 aaKnown RBP13,34□□□□□ -0,27
Smarcc1-201ENSMUST00000088716 FlnbQ80X90 2602 aaKnown RBP13,32□□□□□ -0,28
Smarcc1-201ENSMUST00000088716 Golgb1E9PVZ8 3238 aa13,31□□□□□ -0,28
Smarcc1-201ENSMUST00000088716 AtrQ9JKK8 2635 aa13,28□□□□□ -0,28
Smarcc1-201ENSMUST00000088716 Sprr1aQ62266 144 aa13,27□□□□□ -0,28
Smarcc1-201ENSMUST00000088716 Usp24B1AY13 2617 aaKnown RBP13,25□□□□□ -0,29
Smarcc1-201ENSMUST00000088716 FlnaQ8BTM8 2647 aaKnown RBP13,25□□□□□ -0,29
Smarcc1-201ENSMUST00000088716 Dmbt1Q60997 2085 aa13,25□□□□□ -0,29
Smarcc1-201ENSMUST00000088716 Gm17349F7BGH6 99 aa13,24□□□□□ -0,29
Smarcc1-201ENSMUST00000088716 Krtap15-1Q9QZU5 150 aa13,2□□□□□ -0,3
Smarcc1-201ENSMUST00000088716 Gm9508A0A1W2P7W0 230 aa13,19□□□□□ -0,3
Smarcc1-201ENSMUST00000088716 Gm9195A0A140LHT4 2805 aa13,17□□□□□ -0,3
Smarcc1-201ENSMUST00000088716 Gcn1E9PVA8 2671 aaKnown RBP13,16□□□□□ -0,3
Smarcc1-201ENSMUST00000088716 Gm36176A0A1W2P8D5 158 aa13,12□□□□□ -0,31
Smarcc1-201ENSMUST00000088716 Cystm1Q8K353 104 aa13,1□□□□□ -0,31
Smarcc1-201ENSMUST00000088716 Gm16253D3Z167 63 aa13,09□□□□□ -0,31
Smarcc1-201ENSMUST00000088716 Gm42715A0A087WP63 3095 aaKnown RBP13,08□□□□□ -0,32
Smarcc1-201ENSMUST00000088716 Fn1P11276 2477 aaKnown RBP13,07□□□□□ -0,32
Smarcc1-201ENSMUST00000088716 Gm37013Q8K491 104 aa13,05□□□□□ -0,32
Retrieved 100 of 22,080 RNA–protein pairs in 37,1 ms