RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 1810062G17RikG3X8Y2 129 aa14.45□□□□□ -0.1
Smarcc1-201ENSMUST00000088716 Gm20661K7N787 53 aa14.43□□□□□ -0.1
Smarcc1-201ENSMUST00000088716 Rps28P62858 69 aaKnown RBP14.43□□□□□ -0.1
Smarcc1-201ENSMUST00000088716 Gm17689B3GLJ4 109 aa14.42□□□□□ -0.1
Smarcc1-201ENSMUST00000088716 Q8BGJ3 129 aa14.42□□□□□ -0.1
Smarcc1-201ENSMUST00000088716 Zfp462B1AWL2 2495 aaKnown RBP14.41□□□□□ -0.1
Smarcc1-201ENSMUST00000088716 PtprqP0C5E4 2300 aa14.41□□□□□ -0.1
Smarcc1-201ENSMUST00000088716 Sprr4Q8CGN8 76 aa14.4□□□□□ -0.1
Smarcc1-201ENSMUST00000088716 Defb1P56386 69 aa14.37□□□□□ -0.11
Smarcc1-201ENSMUST00000088716 Hcfc1Q61191 2045 aaKnown RBP14.36□□□□□ -0.11
Smarcc1-201ENSMUST00000088716 AW011738F6S7Q2 159 aa14.32□□□□□ -0.12
Smarcc1-201ENSMUST00000088716 AY074887Q8R5F9 132 aa14.31□□□□□ -0.12
Smarcc1-201ENSMUST00000088716 Coa5Q99M07 74 aa14.29□□□□□ -0.12
Smarcc1-201ENSMUST00000088716 7530416G11RikJ3QJX6 159 aa14.29□□□□□ -0.12
Smarcc1-201ENSMUST00000088716 Lypd5Q9D7Z7 256 aa14.26□□□□□ -0.13
Smarcc1-201ENSMUST00000088716 Setd2E9Q5F9 2537 aa14.26□□□□□ -0.13
Smarcc1-201ENSMUST00000088716 Sprr1bQ62267 153 aa14.25□□□□□ -0.13
Smarcc1-201ENSMUST00000088716 Eif4ebp3Q80VV3 101 aa14.25□□□□□ -0.13
Smarcc1-201ENSMUST00000088716 Bahcc1Q3UHR0 2643 aa14.24□□□□□ -0.13
Smarcc1-201ENSMUST00000088716 MtorQ9JLN9 2549 aa14.23□□□□□ -0.13
Smarcc1-201ENSMUST00000088716 Epg5Q80TA9 2572 aa14.23□□□□□ -0.13
Smarcc1-201ENSMUST00000088716 Cdc42se1Q8BHL7 80 aa14.19□□□□□ -0.14
Smarcc1-201ENSMUST00000088716 Gm7276Q3TYW4 209 aa14.16□□□□□ -0.14
Smarcc1-201ENSMUST00000088716 PolqQ8CGS6 2544 aa14.16□□□□□ -0.14
Smarcc1-201ENSMUST00000088716 Mp68P56379 58 aa14.14□□□□□ -0.15
Smarcc1-201ENSMUST00000088716 Prr13Q9CQJ5 137 aa14.14□□□□□ -0.15
Smarcc1-201ENSMUST00000088716 C530025M09RikF6RGA8 229 aa14.14□□□□□ -0.15
Smarcc1-201ENSMUST00000088716 Defb9Q8R2I6 67 aa14.14□□□□□ -0.15
Smarcc1-201ENSMUST00000088716 Cep192E9Q4Y4 2514 aaKnown RBP14.13□□□□□ -0.15
Smarcc1-201ENSMUST00000088716 Cypt15B1AXS0 87 aa14.09□□□□□ -0.15
Smarcc1-201ENSMUST00000088716 A330070K13RikQ8CA53 115 aa14.08□□□□□ -0.16
Smarcc1-201ENSMUST00000088716 Phxr4P15974 95 aa14.05□□□□□ -0.16
Smarcc1-201ENSMUST00000088716 Gm3233E9Q2H5 230 aa14.05□□□□□ -0.16
Smarcc1-201ENSMUST00000088716 Plac8Q9JI48 112 aa14.02□□□□□ -0.17
Smarcc1-201ENSMUST00000088716 Gm11213A0A1B0GR83 88 aa14.01□□□□□ -0.17
Smarcc1-201ENSMUST00000088716 OxtP35454 125 aa14.01□□□□□ -0.17
Smarcc1-201ENSMUST00000088716 Uqcr11Q9CPX8 56 aa14□□□□□ -0.17
Smarcc1-201ENSMUST00000088716 Phxr5P08399 672 aa14□□□□□ -0.17
Smarcc1-201ENSMUST00000088716 Anapc11Q9CPX9 84 aa13.99□□□□□ -0.17
Smarcc1-201ENSMUST00000088716 Rnase13Q5GAM7 153 aa13.98□□□□□ -0.17
Smarcc1-201ENSMUST00000088716 CnbpP53996 178 aaKnown RBP13.97□□□□□ -0.17
Smarcc1-201ENSMUST00000088716 Abca12E9Q876 2595 aa13.95□□□□□ -0.18
Smarcc1-201ENSMUST00000088716 Fam104aA2A6P4 185 aa13.94□□□□□ -0.18
Smarcc1-201ENSMUST00000088716 Unc79Q0KK59 2596 aa13.9□□□□□ -0.18
Smarcc1-201ENSMUST00000088716 Zcchc13Q9D548 170 aa13.9□□□□□ -0.18
Smarcc1-201ENSMUST00000088716 Gm26620Q9CY65 116 aa13.89□□□□□ -0.19
Smarcc1-201ENSMUST00000088716 Ankrd17Q99NH0 2603 aaKnown RBP13.87□□□□□ -0.19
Smarcc1-201ENSMUST00000088716 Chtf8P0CG14 533 aa13.81□□□□□ -0.2
Smarcc1-201ENSMUST00000088716 CicQ924A2 2510 aa13.78□□□□□ -0.2
Smarcc1-201ENSMUST00000088716 Gm20538F6Z9R1 75 aa13.75□□□□□ -0.21
Smarcc1-201ENSMUST00000088716 Cypt14J3QPF7 87 aa13.73□□□□□ -0.21
Smarcc1-201ENSMUST00000088716 Gm7138L7N2C3 230 aa13.73□□□□□ -0.21
Smarcc1-201ENSMUST00000088716 Gm10643Q3URG9 111 aa13.73□□□□□ -0.21
Smarcc1-201ENSMUST00000088716 Gm3238W4VSP7 230 aa13.73□□□□□ -0.21
Smarcc1-201ENSMUST00000088716 2310034C09RikQ9D746 214 aa13.7□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Fam229bQ8CF36 80 aa13.69□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Usp9yF8VPU6 2556 aa13.69□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Gm11565A2A4M7 156 aa13.68□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Lelp1Q9DAE3 120 aa13.68□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 NbdyA0A0N4SUI7 68 aa13.68□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Gm21798J3QNU5 87 aa13.67□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Smim29Q8R043 75 aa13.67□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Zfp292Q9Z2U2 2698 aa13.67□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Myo18bE9PV66 2605 aa13.65□□□□□ -0.22
Smarcc1-201ENSMUST00000088716 Gm10065F6TJM2 114 aa13.62□□□□□ -0.23
Smarcc1-201ENSMUST00000088716 Nbeal1E9PYP2 2688 aa13.61□□□□□ -0.23
Smarcc1-201ENSMUST00000088716 Gm9821Q8K076 103 aa13.6□□□□□ -0.23
Smarcc1-201ENSMUST00000088716 Pla2g10Q9QXX3 151 aa13.6□□□□□ -0.23
Smarcc1-201ENSMUST00000088716 Gm7137J3QMW1 236 aa13.56□□□□□ -0.24
Smarcc1-201ENSMUST00000088716 CriptO70333 101 aa13.51□□□□□ -0.25
Smarcc1-201ENSMUST00000088716 CenpfE9Q3P4 2997 aaKnown RBP13.5□□□□□ -0.25
Smarcc1-201ENSMUST00000088716 6030445D17RikE9Q8F9 148 aa13.48□□□□□ -0.25
Smarcc1-201ENSMUST00000088716 Gm9955Q8CEJ8 102 aa13.45□□□□□ -0.26
Smarcc1-201ENSMUST00000088716 Gm10320E9PW43 113 aa13.45□□□□□ -0.26
Smarcc1-201ENSMUST00000088716 Gm4491E0CX42 125 aa13.43□□□□□ -0.26
Smarcc1-201ENSMUST00000088716 Ankrd11E9Q4F7 2643 aa13.4□□□□□ -0.27
Smarcc1-201ENSMUST00000088716 Nsd1O88491 2588 aaKnown RBP13.39□□□□□ -0.27
Smarcc1-201ENSMUST00000088716 Gm3880A0A1B0GSB3 72 aa13.38□□□□□ -0.27
Smarcc1-201ENSMUST00000088716 Gm10139O88245 57 aa13.35□□□□□ -0.27
Smarcc1-201ENSMUST00000088716 Spink7Q6IE32 76 aa13.35□□□□□ -0.27
Smarcc1-201ENSMUST00000088716 Odf3bQ5M8M2 238 aa13.34□□□□□ -0.27
Smarcc1-201ENSMUST00000088716 FasnP19096 2504 aaKnown RBP13.34□□□□□ -0.27
Smarcc1-201ENSMUST00000088716 FlnbQ80X90 2602 aaKnown RBP13.32□□□□□ -0.28
Smarcc1-201ENSMUST00000088716 Golgb1E9PVZ8 3238 aa13.31□□□□□ -0.28
Smarcc1-201ENSMUST00000088716 AtrQ9JKK8 2635 aa13.28□□□□□ -0.28
Smarcc1-201ENSMUST00000088716 Sprr1aQ62266 144 aa13.27□□□□□ -0.28
Smarcc1-201ENSMUST00000088716 Usp24B1AY13 2617 aaKnown RBP13.25□□□□□ -0.29
Smarcc1-201ENSMUST00000088716 FlnaQ8BTM8 2647 aaKnown RBP13.25□□□□□ -0.29
Smarcc1-201ENSMUST00000088716 Dmbt1Q60997 2085 aa13.25□□□□□ -0.29
Smarcc1-201ENSMUST00000088716 Gm17349F7BGH6 99 aa13.24□□□□□ -0.29
Smarcc1-201ENSMUST00000088716 Krtap15-1Q9QZU5 150 aa13.2□□□□□ -0.3
Smarcc1-201ENSMUST00000088716 Gm9508A0A1W2P7W0 230 aa13.19□□□□□ -0.3
Smarcc1-201ENSMUST00000088716 Gm9195A0A140LHT4 2805 aa13.17□□□□□ -0.3
Smarcc1-201ENSMUST00000088716 Gcn1E9PVA8 2671 aaKnown RBP13.16□□□□□ -0.3
Smarcc1-201ENSMUST00000088716 Gm36176A0A1W2P8D5 158 aa13.12□□□□□ -0.31
Smarcc1-201ENSMUST00000088716 Cystm1Q8K353 104 aa13.1□□□□□ -0.31
Smarcc1-201ENSMUST00000088716 Gm16253D3Z167 63 aa13.09□□□□□ -0.31
Smarcc1-201ENSMUST00000088716 Gm42715A0A087WP63 3095 aaKnown RBP13.08□□□□□ -0.32
Smarcc1-201ENSMUST00000088716 Fn1P11276 2477 aaKnown RBP13.07□□□□□ -0.32
Smarcc1-201ENSMUST00000088716 Gm37013Q8K491 104 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 1112 ms