RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Msrb1Q9JLC3 116 aa7.82□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Tmem258P61166 79 aa7.81□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Fam19a3Q7TPG6 132 aa7.81□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Brk1Q91VR8 75 aa7.81□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Ighv10-1A0A0B4J1J6 119 aa7.8□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Inafm2A0A1L1STD6 152 aa7.8□□□□□ -1.16
Col9a1-202ENSMUST00000088349 CnbpP53996 178 aaKnown RBP7.8□□□□□ -1.16
Col9a1-202ENSMUST00000088349 9530003J23RikQ8BM26 151 aa7.8□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Samd13D3YUG0 102 aa7.8□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Ufsp1Q9CZP0 217 aa7.8□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Igsf10Q3V1M1 2594 aa7.79□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Pkd1l1Q8R526 2615 aa7.79□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Gm36176A0A1W2P8D5 158 aa7.77□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Rbm3O89086 153 aaKnown RBP7.77□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Igkv1-122A0A140T8M9 119 aa7.77□□□□□ -1.17
Col9a1-202ENSMUST00000088349 SnurfQ9WU12 71 aa7.77□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Gm17577J3QNF7 156 aa7.77□□□□□ -1.17
Col9a1-202ENSMUST00000088349 AY074887Q8R5F9 132 aa7.76□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Igkv1-110A0A0B4J1I0 119 aa7.75□□□□□ -1.17
Col9a1-202ENSMUST00000088349 A730009L09RikA0A1B0GS82 72 aa7.75□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Dnah10D3YYQ8 4591 aa7.75□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Gm19935A0A1B0GSF9 52 aa7.75□□□□□ -1.17
Col9a1-202ENSMUST00000088349 2310034G01RikA0A286YDL3 209 aa7.75□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Cd164Q9R0L9 197 aa7.75□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Defa27F2Z403 93 aa7.74□□□□□ -1.17
Col9a1-202ENSMUST00000088349 A830005F24RikQ8BRT5 167 aa7.74□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Cdk2ap2Q9CPY4 127 aa7.74□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Psors1c2Q80ZC9 134 aa7.73□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Rps28P62858 69 aaKnown RBP7.73□□□□□ -1.17
Col9a1-202ENSMUST00000088349 A730071L15RikQ8C4X0 137 aa7.72□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Fam19a5Q91WE9 132 aa7.72□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Gm10770F7D043 238 aa7.72□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Reg3bP35230 175 aa7.72□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Cox7b2Q9D2H1 82 aa7.72□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Igkv8-34A0A0G2JDU0 121 aa7.72□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Csmd3Q80T79 3707 aa7.72□□□□□ -1.17
Col9a1-202ENSMUST00000088349 A0A286YE02 88 aa7.71□□□□□ -1.17
Col9a1-202ENSMUST00000088349 Sslp1Q3UN54 99 aa7.71□□□□□ -1.17
Col9a1-202ENSMUST00000088349 E130114P18RikF6S0S7 154 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Tcl1b5P56845 121 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Camk2n2Q78WH7 79 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Smim29Q8R043 75 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Cmc4Q61908 68 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Ighv2-5A0A0A6YY69 116 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Igkv8-28A0A0G2JE47 121 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Gm11213A0A1B0GR83 88 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Sfta2E9PXB6 77 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Gm17509Q9CZ61 145 aa7.7□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Klk9Q32M27 251 aa7.69□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Snhg11Q4G0K9 87 aa7.69□□□□□ -1.18
Col9a1-202ENSMUST00000088349 9430015G10RikA2ASP7 199 aa7.69□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Ighv8-13A0A075B5Y0 101 aa7.68□□□□□ -1.18
Col9a1-202ENSMUST00000088349 BC048502Q80Y74 154 aa7.67□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Mrpl55Q9CZ83 127 aa7.67□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Elof1P60003 83 aa7.67□□□□□ -1.18
Col9a1-202ENSMUST00000088349 A330070K13RikQ8CA53 115 aa7.67□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Stab2Q8R4U0 2559 aa7.66□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Igkv4-92A0A0B4J1I2 117 aa7.65□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Gm11011D3Z3L9 86 aa7.65□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Prr15lQ8JZM2 100 aa7.65□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Pde6gP09174 87 aa7.65□□□□□ -1.18
Col9a1-202ENSMUST00000088349 Sec61gP60060 68 aa7.65□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Igkv3-2A0A075B5P0 119 aa7.64□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Ndufc1Q9CQY9 76 aa7.64□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Gm28374F6SG70 93 aa7.63□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Pet100P0DJE0 76 aa7.63□□□□□ -1.19
Col9a1-202ENSMUST00000088349 H2al1aQ5M8Q2 105 aa7.63□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Dnah7bL7N1Y0 4068 aa7.62□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Trav14-1A0A0G2JF94 121 aa7.62□□□□□ -1.19
Col9a1-202ENSMUST00000088349 P06320 134 aa7.62□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Pou2af1Q64693 256 aa7.62□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Gm9508A0A1W2P7W0 230 aa7.62□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Gm10337F7DEP7 55 aa7.62□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Vpreb2P13373 142 aa7.61□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Vpreb1P13372 142 aa7.6□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Defb40Q70KL2 73 aa7.6□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Sprr4Q8CGN8 76 aa7.6□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Ighv2-2A0A075B5P8 116 aa7.6□□□□□ -1.19
Col9a1-202ENSMUST00000088349 P01821 116 aa7.6□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Gm37389A0A0A6YW05 95 aa7.59□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Gm5617Q91VN2 117 aa7.59□□□□□ -1.19
Col9a1-202ENSMUST00000088349 FasnP19096 2504 aaKnown RBP7.59□□□□□ -1.19
Col9a1-202ENSMUST00000088349 TgO08710 2766 aa7.59□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Spink8Q09TK9 105 aa7.59□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Defb12Q8K4N3 78 aa7.59□□□□□ -1.19
Col9a1-202ENSMUST00000088349 Megf8P60882 2789 aa7.58□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Serp1Q9Z1W5 66 aa7.58□□□□□ -1.2
Col9a1-202ENSMUST00000088349 6430550D23RikE9Q1X6 194 aa7.57□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Fam168bQ80XQ8 194 aa7.57□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Dnah14A0A140LIJ4 4489 aa7.57□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Sprr2jO70561 109 aa7.57□□□□□ -1.2
Col9a1-202ENSMUST00000088349 C130032M10RikQ8C888 123 aa7.56□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Gm10570F6VB42 170 aa7.56□□□□□ -1.2
Col9a1-202ENSMUST00000088349 BaalcQ8VHV1 145 aa7.56□□□□□ -1.2
Col9a1-202ENSMUST00000088349 A530084C06RikQ3UTW2 186 aa7.55□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Wfdc17Q5SSJ1 76 aa7.55□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Muc6Q80T03 2850 aa7.55□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Defa28D3Z1V9 94 aa7.55□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Cox6a2P43023 97 aa7.55□□□□□ -1.2
Col9a1-202ENSMUST00000088349 Dph3Q8K0W9 82 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms