RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 CicQ924A2 2510 aa10.89□□□□□ -0.67
Col18a1-202ENSMUST00000081654 AI854703Q8BIN3 203 aa10.88□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Bean1Q9EQG5 255 aa10.87□□□□□ -0.67
Col18a1-202ENSMUST00000081654 CenpfE9Q3P4 2997 aaKnown RBP10.87□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Sprr1bQ62267 153 aa10.86□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Spaca4Q80ZQ0 127 aa10.86□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Defb50Q6TU36 73 aa10.85□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Fam168bQ80XQ8 194 aa10.85□□□□□ -0.67
Col18a1-202ENSMUST00000081654 FlnbQ80X90 2602 aaKnown RBP10.85□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Usp9yF8VPU6 2556 aa10.85□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Gm11565A2A4M7 156 aa10.85□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Q8BT88 171 aa10.85□□□□□ -0.67
Col18a1-202ENSMUST00000081654 Gm10308Q9CVR5 141 aa10.83□□□□□ -0.68
Col18a1-202ENSMUST00000081654 Gm5617Q91VN2 117 aa10.83□□□□□ -0.68
Col18a1-202ENSMUST00000081654 AY074887Q8R5F9 132 aa10.82□□□□□ -0.68
Col18a1-202ENSMUST00000081654 Gm10197F6QEY5 67 aa10.82□□□□□ -0.68
Col18a1-202ENSMUST00000081654 Krtap16-1A2A5X5 502 aa10.81□□□□□ -0.68
Col18a1-202ENSMUST00000081654 RetnlbQ99P86 105 aa10.81□□□□□ -0.68
Col18a1-202ENSMUST00000081654 Gm10999F6Q4M4 69 aa10.81□□□□□ -0.68
Col18a1-202ENSMUST00000081654 Gm17689B3GLJ4 109 aa10.8□□□□□ -0.68
Col18a1-202ENSMUST00000081654 A930002H24RikQ8C8Y3 163 aa10.78□□□□□ -0.68
Col18a1-202ENSMUST00000081654 Gm42715A0A087WP63 3095 aaKnown RBP10.77□□□□□ -0.69
Col18a1-202ENSMUST00000081654 PcntP48725 2898 aa10.76□□□□□ -0.69
Col18a1-202ENSMUST00000081654 4930507D05RikQ8C9C9 103 aa10.76□□□□□ -0.69
Col18a1-202ENSMUST00000081654 Ankrd11E9Q4F7 2643 aa10.75□□□□□ -0.69
Col18a1-202ENSMUST00000081654 Rpl37aP61514 92 aa10.75□□□□□ -0.69
Col18a1-202ENSMUST00000081654 Gm3233E9Q2H5 230 aa10.74□□□□□ -0.69
Col18a1-202ENSMUST00000081654 Spint4Q9D263 159 aa10.74□□□□□ -0.69
Col18a1-202ENSMUST00000081654 Limd2Q8BGB5 128 aa10.72□□□□□ -0.69
Col18a1-202ENSMUST00000081654 Eif4ebp3Q80VV3 101 aa10.71□□□□□ -0.69
Col18a1-202ENSMUST00000081654 Gm7276Q3TYW4 209 aa10.71□□□□□ -0.7
Col18a1-202ENSMUST00000081654 OxtP35454 125 aa10.69□□□□□ -0.7
Col18a1-202ENSMUST00000081654 FasnP19096 2504 aaKnown RBP10.69□□□□□ -0.7
Col18a1-202ENSMUST00000081654 C530025M09RikF6RGA8 229 aa10.68□□□□□ -0.7
Col18a1-202ENSMUST00000081654 Rps28P62858 69 aaKnown RBP10.66□□□□□ -0.7
Col18a1-202ENSMUST00000081654 CnbpP53996 178 aaKnown RBP10.64□□□□□ -0.71
Col18a1-202ENSMUST00000081654 AtrQ9JKK8 2635 aa10.64□□□□□ -0.71
Col18a1-202ENSMUST00000081654 Defb9Q8R2I6 67 aa10.64□□□□□ -0.71
Col18a1-202ENSMUST00000081654 Lelp1Q9DAE3 120 aa10.64□□□□□ -0.71
Col18a1-202ENSMUST00000081654 Nbeal1E9PYP2 2688 aa10.64□□□□□ -0.71
Col18a1-202ENSMUST00000081654 Q8BGJ3 129 aa10.62□□□□□ -0.71
Col18a1-202ENSMUST00000081654 Gm11213A0A1B0GR83 88 aa10.61□□□□□ -0.71
Col18a1-202ENSMUST00000081654 A530084C06RikQ3UTW2 186 aa10.6□□□□□ -0.71
Col18a1-202ENSMUST00000081654 FlnaQ8BTM8 2647 aaKnown RBP10.6□□□□□ -0.71
Col18a1-202ENSMUST00000081654 7530416G11RikJ3QJX6 159 aa10.59□□□□□ -0.71
Col18a1-202ENSMUST00000081654 Gm12216A0A1W2P827 62 aa10.58□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Gm20661K7N787 53 aa10.58□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Plac8Q9JI48 112 aa10.57□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Ep400Q8CHI8 3072 aaKnown RBP10.57□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Dnah12Q3V0Q1 3086 aa10.56□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Hectd1Q69ZR2 2618 aaKnown RBP10.56□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Zcchc13Q9D548 170 aa10.55□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Cypt15B1AXS0 87 aa10.54□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Coa5Q99M07 74 aa10.54□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Fam104aA2A6P4 185 aa10.54□□□□□ -0.72
Col18a1-202ENSMUST00000081654 A330070K13RikQ8CA53 115 aa10.53□□□□□ -0.72
Col18a1-202ENSMUST00000081654 Gcn1E9PVA8 2671 aaKnown RBP10.52□□□□□ -0.73
Col18a1-202ENSMUST00000081654 Cdc42se1Q8BHL7 80 aa10.5□□□□□ -0.73
Col18a1-202ENSMUST00000081654 Phxr5P08399 672 aa10.5□□□□□ -0.73
Col18a1-202ENSMUST00000081654 Defb1P56386 69 aa10.5□□□□□ -0.73
Col18a1-202ENSMUST00000081654 Usp24B1AY13 2617 aaKnown RBP10.48□□□□□ -0.73
Col18a1-202ENSMUST00000081654 Gm7138L7N2C3 230 aa10.47□□□□□ -0.73
Col18a1-202ENSMUST00000081654 Gm3238W4VSP7 230 aa10.47□□□□□ -0.73
Col18a1-202ENSMUST00000081654 Gm9195A0A140LHT4 2805 aa10.45□□□□□ -0.74
Col18a1-202ENSMUST00000081654 Anapc11Q9CPX9 84 aa10.44□□□□□ -0.74
Col18a1-202ENSMUST00000081654 Nsd1O88491 2588 aaKnown RBP10.43□□□□□ -0.74
Col18a1-202ENSMUST00000081654 Cep350E9Q309 3095 aa10.4□□□□□ -0.74
Col18a1-202ENSMUST00000081654 Prr13Q9CQJ5 137 aa10.4□□□□□ -0.74
Col18a1-202ENSMUST00000081654 Gm26620Q9CY65 116 aa10.4□□□□□ -0.74
Col18a1-202ENSMUST00000081654 Gm10065F6TJM2 114 aa10.39□□□□□ -0.75
Col18a1-202ENSMUST00000081654 Prune2Q52KR3 3084 aa10.38□□□□□ -0.75
Col18a1-202ENSMUST00000081654 Phxr4P15974 95 aa10.38□□□□□ -0.75
Col18a1-202ENSMUST00000081654 NbdyA0A0N4SUI7 68 aa10.36□□□□□ -0.75
Col18a1-202ENSMUST00000081654 Cypt14J3QPF7 87 aa10.36□□□□□ -0.75
Col18a1-202ENSMUST00000081654 Gm7137J3QMW1 236 aa10.35□□□□□ -0.75
Col18a1-202ENSMUST00000081654 Uqcr11Q9CPX8 56 aa10.35□□□□□ -0.75
Col18a1-202ENSMUST00000081654 Itpr1P11881 2749 aa10.33□□□□□ -0.76
Col18a1-202ENSMUST00000081654 Fn1P11276 2477 aaKnown RBP10.33□□□□□ -0.76
Col18a1-202ENSMUST00000081654 Dmbt1Q60997 2085 aa10.31□□□□□ -0.76
Col18a1-202ENSMUST00000081654 Tnrc18Q80WC3 2878 aa10.3□□□□□ -0.76
Col18a1-202ENSMUST00000081654 Notch1Q01705 2531 aa10.3□□□□□ -0.76
Col18a1-202ENSMUST00000081654 UtrnE9Q6R7 3430 aa10.3□□□□□ -0.76
Col18a1-202ENSMUST00000081654 Smim29Q8R043 75 aa10.29□□□□□ -0.76
Col18a1-202ENSMUST00000081654 TrioQ0KL02 3102 aa10.28□□□□□ -0.76
Col18a1-202ENSMUST00000081654 Rnase13Q5GAM7 153 aa10.28□□□□□ -0.76
Col18a1-202ENSMUST00000081654 Myo15bI7HPW8 3033 aa10.27□□□□□ -0.77
Col18a1-202ENSMUST00000081654 Stab1Q8R4Y4 2571 aa10.27□□□□□ -0.77
Col18a1-202ENSMUST00000081654 Chtf8P0CG14 533 aa10.25□□□□□ -0.77
Col18a1-202ENSMUST00000081654 Lama2Q60675 3118 aaKnown RBP10.24□□□□□ -0.77
Col18a1-202ENSMUST00000081654 Mp68P56379 58 aa10.17□□□□□ -0.78
Col18a1-202ENSMUST00000081654 Fam229bQ8CF36 80 aa10.16□□□□□ -0.78
Col18a1-202ENSMUST00000081654 2310034C09RikQ9D746 214 aa10.16□□□□□ -0.78
Col18a1-202ENSMUST00000081654 Gm9821Q8K076 103 aa10.15□□□□□ -0.78
Col18a1-202ENSMUST00000081654 Gm17349F7BGH6 99 aa10.15□□□□□ -0.78
Col18a1-202ENSMUST00000081654 Gm10643Q3URG9 111 aa10.15□□□□□ -0.78
Col18a1-202ENSMUST00000081654 NipblQ6KCD5 2798 aaKnown RBP10.15□□□□□ -0.78
Col18a1-202ENSMUST00000081654 Gm10320E9PW43 113 aa10.15□□□□□ -0.78
Col18a1-202ENSMUST00000081654 Prrc2cQ3TLH4 2846 aaKnown RBP10.15□□□□□ -0.79
Col18a1-202ENSMUST00000081654 Sprr1aQ62266 144 aa10.13□□□□□ -0.79
Col18a1-202ENSMUST00000081654 Gm10139O88245 57 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 97.7 ms