RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Gm27235Q3UW50 83 aa9.88□□□□□ -0.83
Syne3-201ENSMUST00000067005 Defb50Q6TU36 73 aa9.87□□□□□ -0.83
Syne3-201ENSMUST00000067005 Usp9yF8VPU6 2556 aa9.85□□□□□ -0.83
Syne3-201ENSMUST00000067005 AY074887Q8R5F9 132 aa9.84□□□□□ -0.83
Syne3-201ENSMUST00000067005 Krtap11-1E9Q2E9 183 aa9.84□□□□□ -0.83
Syne3-201ENSMUST00000067005 Rps28P62858 69 aaKnown RBP9.83□□□□□ -0.84
Syne3-201ENSMUST00000067005 9230102O04RikA2ASX7 82 aa9.83□□□□□ -0.84
Syne3-201ENSMUST00000067005 PcntP48725 2898 aa9.82□□□□□ -0.84
Syne3-201ENSMUST00000067005 Gm10197F6QEY5 67 aa9.81□□□□□ -0.84
Syne3-201ENSMUST00000067005 Q8BT88 171 aa9.79□□□□□ -0.84
Syne3-201ENSMUST00000067005 Spint4Q9D263 159 aa9.78□□□□□ -0.84
Syne3-201ENSMUST00000067005 CicQ924A2 2510 aa9.77□□□□□ -0.84
Syne3-201ENSMUST00000067005 Gpr15lA0A0B4J1N3 78 aa9.77□□□□□ -0.85
Syne3-201ENSMUST00000067005 Bean1Q9EQG5 255 aa9.77□□□□□ -0.85
Syne3-201ENSMUST00000067005 Gm7276Q3TYW4 209 aa9.76□□□□□ -0.85
Syne3-201ENSMUST00000067005 Limd2Q8BGB5 128 aa9.76□□□□□ -0.85
Syne3-201ENSMUST00000067005 A930002H24RikQ8C8Y3 163 aa9.76□□□□□ -0.85
Syne3-201ENSMUST00000067005 FlnbQ80X90 2602 aaKnown RBP9.76□□□□□ -0.85
Syne3-201ENSMUST00000067005 Gm42715A0A087WP63 3095 aaKnown RBP9.76□□□□□ -0.85
Syne3-201ENSMUST00000067005 Eif4ebp3Q80VV3 101 aa9.76□□□□□ -0.85
Syne3-201ENSMUST00000067005 Gm17606F6ZL36 78 aa9.74□□□□□ -0.85
Syne3-201ENSMUST00000067005 Fam168bQ80XQ8 194 aa9.74□□□□□ -0.85
Syne3-201ENSMUST00000067005 1810062G17RikG3X8Y2 129 aa9.74□□□□□ -0.85
Syne3-201ENSMUST00000067005 Gm17689B3GLJ4 109 aa9.7□□□□□ -0.86
Syne3-201ENSMUST00000067005 Spaca4Q80ZQ0 127 aa9.7□□□□□ -0.86
Syne3-201ENSMUST00000067005 4930507D05RikQ8C9C9 103 aa9.7□□□□□ -0.86
Syne3-201ENSMUST00000067005 Ankrd11E9Q4F7 2643 aa9.69□□□□□ -0.86
Syne3-201ENSMUST00000067005 C530025M09RikF6RGA8 229 aa9.68□□□□□ -0.86
Syne3-201ENSMUST00000067005 Gm10999F6Q4M4 69 aa9.68□□□□□ -0.86
Syne3-201ENSMUST00000067005 FasnP19096 2504 aaKnown RBP9.68□□□□□ -0.86
Syne3-201ENSMUST00000067005 7530416G11RikJ3QJX6 159 aa9.67□□□□□ -0.86
Syne3-201ENSMUST00000067005 Gm5617Q91VN2 117 aa9.67□□□□□ -0.86
Syne3-201ENSMUST00000067005 CnbpP53996 178 aaKnown RBP9.66□□□□□ -0.86
Syne3-201ENSMUST00000067005 Rpl37aP61514 92 aa9.66□□□□□ -0.86
Syne3-201ENSMUST00000067005 Nbeal1E9PYP2 2688 aa9.66□□□□□ -0.86
Syne3-201ENSMUST00000067005 A530084C06RikQ3UTW2 186 aa9.65□□□□□ -0.86
Syne3-201ENSMUST00000067005 Gm11213A0A1B0GR83 88 aa9.63□□□□□ -0.87
Syne3-201ENSMUST00000067005 FlnaQ8BTM8 2647 aaKnown RBP9.62□□□□□ -0.87
Syne3-201ENSMUST00000067005 Dnah12Q3V0Q1 3086 aa9.62□□□□□ -0.87
Syne3-201ENSMUST00000067005 Cdc42se1Q8BHL7 80 aa9.6□□□□□ -0.87
Syne3-201ENSMUST00000067005 Ep400Q8CHI8 3072 aaKnown RBP9.6□□□□□ -0.87
Syne3-201ENSMUST00000067005 Lelp1Q9DAE3 120 aa9.59□□□□□ -0.87
Syne3-201ENSMUST00000067005 AtrQ9JKK8 2635 aa9.58□□□□□ -0.88
Syne3-201ENSMUST00000067005 Gcn1E9PVA8 2671 aaKnown RBP9.58□□□□□ -0.88
Syne3-201ENSMUST00000067005 Coa5Q99M07 74 aa9.57□□□□□ -0.88
Syne3-201ENSMUST00000067005 Fam104aA2A6P4 185 aa9.57□□□□□ -0.88
Syne3-201ENSMUST00000067005 Defb9Q8R2I6 67 aa9.56□□□□□ -0.88
Syne3-201ENSMUST00000067005 Zcchc13Q9D548 170 aa9.56□□□□□ -0.88
Syne3-201ENSMUST00000067005 Gm20661K7N787 53 aa9.56□□□□□ -0.88
Syne3-201ENSMUST00000067005 Gm3233E9Q2H5 230 aa9.55□□□□□ -0.88
Syne3-201ENSMUST00000067005 OxtP35454 125 aa9.55□□□□□ -0.88
Syne3-201ENSMUST00000067005 RetnlbQ99P86 105 aa9.55□□□□□ -0.88
Syne3-201ENSMUST00000067005 Prr13Q9CQJ5 137 aa9.54□□□□□ -0.88
Syne3-201ENSMUST00000067005 Hectd1Q69ZR2 2618 aaKnown RBP9.54□□□□□ -0.88
Syne3-201ENSMUST00000067005 Q8BGJ3 129 aa9.53□□□□□ -0.88
Syne3-201ENSMUST00000067005 A330070K13RikQ8CA53 115 aa9.52□□□□□ -0.89
Syne3-201ENSMUST00000067005 Gm9195A0A140LHT4 2805 aa9.52□□□□□ -0.89
Syne3-201ENSMUST00000067005 Tnrc18Q80WC3 2878 aa9.51□□□□□ -0.89
Syne3-201ENSMUST00000067005 Cypt15B1AXS0 87 aa9.51□□□□□ -0.89
Syne3-201ENSMUST00000067005 Cep350E9Q309 3095 aa9.51□□□□□ -0.89
Syne3-201ENSMUST00000067005 Gm12216A0A1W2P827 62 aa9.49□□□□□ -0.89
Syne3-201ENSMUST00000067005 Phxr5P08399 672 aa9.49□□□□□ -0.89
Syne3-201ENSMUST00000067005 Usp24B1AY13 2617 aaKnown RBP9.48□□□□□ -0.89
Syne3-201ENSMUST00000067005 Phxr4P15974 95 aa9.47□□□□□ -0.89
Syne3-201ENSMUST00000067005 Plac8Q9JI48 112 aa9.44□□□□□ -0.9
Syne3-201ENSMUST00000067005 Dmbt1Q60997 2085 aa9.43□□□□□ -0.9
Syne3-201ENSMUST00000067005 Uqcr11Q9CPX8 56 aa9.42□□□□□ -0.9
Syne3-201ENSMUST00000067005 Nsd1O88491 2588 aaKnown RBP9.41□□□□□ -0.9
Syne3-201ENSMUST00000067005 Gm10065F6TJM2 114 aa9.41□□□□□ -0.9
Syne3-201ENSMUST00000067005 Prune2Q52KR3 3084 aa9.4□□□□□ -0.9
Syne3-201ENSMUST00000067005 Itpr1P11881 2749 aa9.39□□□□□ -0.91
Syne3-201ENSMUST00000067005 Fn1P11276 2477 aaKnown RBP9.38□□□□□ -0.91
Syne3-201ENSMUST00000067005 Notch1Q01705 2531 aa9.37□□□□□ -0.91
Syne3-201ENSMUST00000067005 Cypt14J3QPF7 87 aa9.37□□□□□ -0.91
Syne3-201ENSMUST00000067005 Gm26620Q9CY65 116 aa9.37□□□□□ -0.91
Syne3-201ENSMUST00000067005 Defb1P56386 69 aa9.36□□□□□ -0.91
Syne3-201ENSMUST00000067005 NbdyA0A0N4SUI7 68 aa9.35□□□□□ -0.91
Syne3-201ENSMUST00000067005 Anapc11Q9CPX9 84 aa9.33□□□□□ -0.92
Syne3-201ENSMUST00000067005 Myo15bI7HPW8 3033 aa9.32□□□□□ -0.92
Syne3-201ENSMUST00000067005 Gm7138L7N2C3 230 aa9.31□□□□□ -0.92
Syne3-201ENSMUST00000067005 Gm3238W4VSP7 230 aa9.31□□□□□ -0.92
Syne3-201ENSMUST00000067005 Chtf8P0CG14 533 aa9.31□□□□□ -0.92
Syne3-201ENSMUST00000067005 Map1aQ9QYR6 2776 aa9.3□□□□□ -0.92
Syne3-201ENSMUST00000067005 NipblQ6KCD5 2798 aaKnown RBP9.3□□□□□ -0.92
Syne3-201ENSMUST00000067005 Lama2Q60675 3118 aaKnown RBP9.29□□□□□ -0.92
Syne3-201ENSMUST00000067005 Gm10643Q3URG9 111 aa9.29□□□□□ -0.92
Syne3-201ENSMUST00000067005 Stab1Q8R4Y4 2571 aa9.29□□□□□ -0.92
Syne3-201ENSMUST00000067005 Smim29Q8R043 75 aa9.29□□□□□ -0.92
Syne3-201ENSMUST00000067005 TrioQ0KL02 3102 aa9.28□□□□□ -0.92
Syne3-201ENSMUST00000067005 Prrc2cQ3TLH4 2846 aaKnown RBP9.28□□□□□ -0.92
Syne3-201ENSMUST00000067005 UtrnE9Q6R7 3430 aa9.24□□□□□ -0.93
Syne3-201ENSMUST00000067005 Chd7A2AJK6 2986 aaKnown RBP9.24□□□□□ -0.93
Syne3-201ENSMUST00000067005 Gm10320E9PW43 113 aa9.24□□□□□ -0.93
Syne3-201ENSMUST00000067005 Fam229bQ8CF36 80 aa9.24□□□□□ -0.93
Syne3-201ENSMUST00000067005 Sprr1aQ62266 144 aa9.22□□□□□ -0.93
Syne3-201ENSMUST00000067005 Kmt2bO08550 2713 aa9.21□□□□□ -0.93
Syne3-201ENSMUST00000067005 Rnase13Q5GAM7 153 aa9.2□□□□□ -0.94
Syne3-201ENSMUST00000067005 Gm10139O88245 57 aa9.18□□□□□ -0.94
Syne3-201ENSMUST00000067005 2310034C09RikQ9D746 214 aa9.17□□□□□ -0.94
Syne3-201ENSMUST00000067005 Gm7137J3QMW1 236 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 93.1 ms