RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Spint4Q9D263 159 aa11.85□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Ep400Q8CHI8 3072 aaKnown RBP11.85□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Q8BGJ3 129 aa11.85□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Gm42715A0A087WP63 3095 aaKnown RBP11.84□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Epg5Q80TA9 2572 aa11.84□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Fam168bQ80XQ8 194 aa11.84□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Q8BT88 171 aa11.82□□□□□ -0.52
Pcdhac2-201ENSMUST00000047479 AplnQ9R0R4 77 aa11.82□□□□□ -0.52
Pcdhac2-201ENSMUST00000047479 Defb1P56386 69 aa11.79□□□□□ -0.52
Pcdhac2-201ENSMUST00000047479 Krtap11-1E9Q2E9 183 aa11.77□□□□□ -0.53
Pcdhac2-201ENSMUST00000047479 AI854703Q8BIN3 203 aa11.77□□□□□ -0.53
Pcdhac2-201ENSMUST00000047479 Limd2Q8BGB5 128 aa11.76□□□□□ -0.53
Pcdhac2-201ENSMUST00000047479 Hcfc1Q61191 2045 aaKnown RBP11.75□□□□□ -0.53
Pcdhac2-201ENSMUST00000047479 Sprr4Q8CGN8 76 aa11.71□□□□□ -0.53
Pcdhac2-201ENSMUST00000047479 Gm20661K7N787 53 aa11.71□□□□□ -0.53
Pcdhac2-201ENSMUST00000047479 Krtap16-1A2A5X5 502 aa11.69□□□□□ -0.54
Pcdhac2-201ENSMUST00000047479 AW011738F6S7Q2 159 aa11.68□□□□□ -0.54
Pcdhac2-201ENSMUST00000047479 A530084C06RikQ3UTW2 186 aa11.66□□□□□ -0.54
Pcdhac2-201ENSMUST00000047479 Gm10308Q9CVR5 141 aa11.65□□□□□ -0.54
Pcdhac2-201ENSMUST00000047479 Unc79Q0KK59 2596 aa11.64□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 Abca12E9Q876 2595 aa11.63□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 OxtP35454 125 aa11.62□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 CicQ924A2 2510 aa11.62□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 Gm3233E9Q2H5 230 aa11.61□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 AY074887Q8R5F9 132 aa11.6□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 Usp9yF8VPU6 2556 aa11.6□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 Cep192E9Q4Y4 2514 aaKnown RBP11.59□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 Lypd5Q9D7Z7 256 aa11.58□□□□□ -0.55
Pcdhac2-201ENSMUST00000047479 PcntP48725 2898 aa11.58□□□□□ -0.56
Pcdhac2-201ENSMUST00000047479 Defb9Q8R2I6 67 aa11.57□□□□□ -0.56
Pcdhac2-201ENSMUST00000047479 Mp68P56379 58 aa11.57□□□□□ -0.56
Pcdhac2-201ENSMUST00000047479 7530416G11RikJ3QJX6 159 aa11.55□□□□□ -0.56
Pcdhac2-201ENSMUST00000047479 Sprr1bQ62267 153 aa11.55□□□□□ -0.56
Pcdhac2-201ENSMUST00000047479 Plac8Q9JI48 112 aa11.54□□□□□ -0.56
Pcdhac2-201ENSMUST00000047479 Coa5Q99M07 74 aa11.54□□□□□ -0.56
Pcdhac2-201ENSMUST00000047479 Rps28P62858 69 aaKnown RBP11.52□□□□□ -0.57
Pcdhac2-201ENSMUST00000047479 Cypt15B1AXS0 87 aa11.51□□□□□ -0.57
Pcdhac2-201ENSMUST00000047479 Dnah12Q3V0Q1 3086 aa11.51□□□□□ -0.57
Pcdhac2-201ENSMUST00000047479 Rnase13Q5GAM7 153 aa11.5□□□□□ -0.57
Pcdhac2-201ENSMUST00000047479 Anapc11Q9CPX9 84 aa11.5□□□□□ -0.57
Pcdhac2-201ENSMUST00000047479 Eif4ebp3Q80VV3 101 aa11.48□□□□□ -0.57
Pcdhac2-201ENSMUST00000047479 Ankrd17Q99NH0 2603 aaKnown RBP11.48□□□□□ -0.57
Pcdhac2-201ENSMUST00000047479 C530025M09RikF6RGA8 229 aa11.45□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 A330070K13RikQ8CA53 115 aa11.45□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 Cep350E9Q309 3095 aa11.45□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 Gm7276Q3TYW4 209 aa11.45□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 TrioQ0KL02 3102 aa11.45□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 Myo18bE9PV66 2605 aa11.44□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 Phxr5P08399 672 aa11.44□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 Cdc42se1Q8BHL7 80 aa11.42□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 Gm11213A0A1B0GR83 88 aa11.41□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 Lama3Q61789 3330 aa11.41□□□□□ -0.58
Pcdhac2-201ENSMUST00000047479 Gm26620Q9CY65 116 aa11.37□□□□□ -0.59
Pcdhac2-201ENSMUST00000047479 CnbpP53996 178 aaKnown RBP11.36□□□□□ -0.59
Pcdhac2-201ENSMUST00000047479 Ankrd11E9Q4F7 2643 aa11.35□□□□□ -0.59
Pcdhac2-201ENSMUST00000047479 Gm7138L7N2C3 230 aa11.34□□□□□ -0.59
Pcdhac2-201ENSMUST00000047479 Gm3238W4VSP7 230 aa11.34□□□□□ -0.59
Pcdhac2-201ENSMUST00000047479 Gm20538F6Z9R1 75 aa11.32□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 Uqcr11Q9CPX8 56 aa11.32□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 Phxr4P15974 95 aa11.32□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 Zfp292Q9Z2U2 2698 aa11.31□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 Fam104aA2A6P4 185 aa11.31□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 Nbeal1E9PYP2 2688 aa11.31□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 Zcchc13Q9D548 170 aa11.3□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 FlnbQ80X90 2602 aaKnown RBP11.29□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 Pla2g10Q9QXX3 151 aa11.27□□□□□ -0.6
Pcdhac2-201ENSMUST00000047479 FasnP19096 2504 aaKnown RBP11.27□□□□□ -0.61
Pcdhac2-201ENSMUST00000047479 Prr13Q9CQJ5 137 aa11.26□□□□□ -0.61
Pcdhac2-201ENSMUST00000047479 Gm9821Q8K076 103 aa11.25□□□□□ -0.61
Pcdhac2-201ENSMUST00000047479 Gm7137J3QMW1 236 aa11.24□□□□□ -0.61
Pcdhac2-201ENSMUST00000047479 Usp34Q6ZQ93 3582 aa11.2□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 Lama2Q60675 3118 aaKnown RBP11.19□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 Chtf8P0CG14 533 aa11.19□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 CenpfE9Q3P4 2997 aaKnown RBP11.18□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 Lelp1Q9DAE3 120 aa11.18□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 Cypt14J3QPF7 87 aa11.17□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 Usp24B1AY13 2617 aaKnown RBP11.17□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 AtrQ9JKK8 2635 aa11.17□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 NbdyA0A0N4SUI7 68 aa11.17□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 2310034C09RikQ9D746 214 aa11.17□□□□□ -0.62
Pcdhac2-201ENSMUST00000047479 Nsd1O88491 2588 aaKnown RBP11.13□□□□□ -0.63
Pcdhac2-201ENSMUST00000047479 Gm21798J3QNU5 87 aa11.12□□□□□ -0.63
Pcdhac2-201ENSMUST00000047479 Smim29Q8R043 75 aa11.12□□□□□ -0.63
Pcdhac2-201ENSMUST00000047479 Jbts17Q8CE72 3214 aa11.12□□□□□ -0.63
Pcdhac2-201ENSMUST00000047479 Prune2Q52KR3 3084 aa11.12□□□□□ -0.63
Pcdhac2-201ENSMUST00000047479 Gm10065F6TJM2 114 aa11.11□□□□□ -0.63
Pcdhac2-201ENSMUST00000047479 Gm11565A2A4M7 156 aa11.06□□□□□ -0.64
Pcdhac2-201ENSMUST00000047479 Spink7Q6IE32 76 aa11.05□□□□□ -0.64
Pcdhac2-201ENSMUST00000047479 CriptO70333 101 aa11.04□□□□□ -0.64
Pcdhac2-201ENSMUST00000047479 Fam229bQ8CF36 80 aa11.03□□□□□ -0.64
Pcdhac2-201ENSMUST00000047479 Gm10643Q3URG9 111 aa10.99□□□□□ -0.65
Pcdhac2-201ENSMUST00000047479 Fn1P11276 2477 aaKnown RBP10.98□□□□□ -0.65
Pcdhac2-201ENSMUST00000047479 FlnaQ8BTM8 2647 aaKnown RBP10.98□□□□□ -0.65
Pcdhac2-201ENSMUST00000047479 Gm4491E0CX42 125 aa10.97□□□□□ -0.65
Pcdhac2-201ENSMUST00000047479 Mki67E9PVX6 3177 aaKnown RBP10.97□□□□□ -0.65
Pcdhac2-201ENSMUST00000047479 6030445D17RikE9Q8F9 148 aa10.97□□□□□ -0.65
Pcdhac2-201ENSMUST00000047479 Dmbt1Q60997 2085 aa10.96□□□□□ -0.66
Pcdhac2-201ENSMUST00000047479 Gm9955Q8CEJ8 102 aa10.95□□□□□ -0.66
Pcdhac2-201ENSMUST00000047479 Gm7173A0A0G2JEB6 3132 aa10.92□□□□□ -0.66
Pcdhac2-201ENSMUST00000047479 Gm17349F7BGH6 99 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 109.8 ms