RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Gm8439G3UWA7 96 aa6.6□□□□□ -1.35
Copb1-201ENSMUST00000033012 Igkv1-122A0A140T8M9 119 aa6.59□□□□□ -1.35
Copb1-201ENSMUST00000033012 Igkv3-9A0A140T8P4 119 aa6.59□□□□□ -1.35
Copb1-201ENSMUST00000033012 Igkv3-4A0A140T8Q4 119 aa6.59□□□□□ -1.35
Copb1-201ENSMUST00000033012 Gcn1E9PVA8 2671 aaKnown RBP6.59□□□□□ -1.35
Copb1-201ENSMUST00000033012 Gm3285A0A1W2P7U0 201 aa6.58□□□□□ -1.36
Copb1-201ENSMUST00000033012 Gm17577J3QNF7 156 aa6.58□□□□□ -1.36
Copb1-201ENSMUST00000033012 Lelp1Q9DAE3 120 aa6.58□□□□□ -1.36
Copb1-201ENSMUST00000033012 Phxr5P08399 672 aa6.58□□□□□ -1.36
Copb1-201ENSMUST00000033012 Defb33Q30KN3 62 aa6.58□□□□□ -1.36
Copb1-201ENSMUST00000033012 Gm44790A0A0N4SV91 103 aa6.57□□□□□ -1.36
Copb1-201ENSMUST00000033012 Ttc28Q80XJ3 2450 aa6.56□□□□□ -1.36
Copb1-201ENSMUST00000033012 Wnk1P83741 2377 aa6.56□□□□□ -1.36
Copb1-201ENSMUST00000033012 PrcdQ00LT2 53 aa6.56□□□□□ -1.36
Copb1-201ENSMUST00000033012 Celsr2Q9R0M0 2920 aa6.56□□□□□ -1.36
Copb1-201ENSMUST00000033012 Csmd2V9GX34 3611 aa6.55□□□□□ -1.36
Copb1-201ENSMUST00000033012 Igfn1Q3KNY0 2849 aa6.55□□□□□ -1.36
Copb1-201ENSMUST00000033012 Cdk2ap2Q9CPY4 127 aa6.55□□□□□ -1.36
Copb1-201ENSMUST00000033012 A0A286YE49 62 aa6.53□□□□□ -1.36
Copb1-201ENSMUST00000033012 Gm20604F8WIA3 75 aa6.53□□□□□ -1.36
Copb1-201ENSMUST00000033012 Defb40Q70KL2 73 aa6.53□□□□□ -1.36
Copb1-201ENSMUST00000033012 Rnase1P00683 149 aa6.53□□□□□ -1.36
Copb1-201ENSMUST00000033012 1700074P13RikQ9D9G7 251 aa6.53□□□□□ -1.36
Copb1-201ENSMUST00000033012 Gm9195A0A140LHT4 2805 aa6.52□□□□□ -1.37
Copb1-201ENSMUST00000033012 A0A286YCN5 57 aa6.52□□□□□ -1.37
Copb1-201ENSMUST00000033012 SptssbQ925E8 76 aa6.52□□□□□ -1.37
Copb1-201ENSMUST00000033012 CenpeQ6RT24 2474 aaKnown RBP6.52□□□□□ -1.37
Copb1-201ENSMUST00000033012 Pla2g2cP48076 150 aa6.51□□□□□ -1.37
Copb1-201ENSMUST00000033012 Nav3Q80TN7 2359 aa6.5□□□□□ -1.37
Copb1-201ENSMUST00000033012 Abca2P41234 2434 aa6.5□□□□□ -1.37
Copb1-201ENSMUST00000033012 Chtf8P0CG14 533 aa6.5□□□□□ -1.37
Copb1-201ENSMUST00000033012 Ccl21aP84444 133 aa6.5□□□□□ -1.37
Copb1-201ENSMUST00000033012 Cox7b2Q9D2H1 82 aa6.5□□□□□ -1.37
Copb1-201ENSMUST00000033012 A730009L09RikA0A1B0GS82 72 aa6.49□□□□□ -1.37
Copb1-201ENSMUST00000033012 Igkv3-1A0A075B5P1 119 aa6.49□□□□□ -1.37
Copb1-201ENSMUST00000033012 Igkv3-7A0A0G2JE31 119 aa6.49□□□□□ -1.37
Copb1-201ENSMUST00000033012 Gm12353A2AGJ4 60 aa6.49□□□□□ -1.37
Copb1-201ENSMUST00000033012 PscaP57096 123 aa6.48□□□□□ -1.37
Copb1-201ENSMUST00000033012 Zcchc13Q9D548 170 aa6.48□□□□□ -1.37
Copb1-201ENSMUST00000033012 Gm9821Q8K076 103 aa6.47□□□□□ -1.37
Copb1-201ENSMUST00000033012 Chd6A3KFM7 2711 aa6.47□□□□□ -1.37
Copb1-201ENSMUST00000033012 Gm17521F6QAC8 156 aa6.47□□□□□ -1.37
Copb1-201ENSMUST00000033012 Ndufb1P0DN34 57 aa6.47□□□□□ -1.37
Copb1-201ENSMUST00000033012 Gm21886J3QJU9 214 aa6.47□□□□□ -1.37
Copb1-201ENSMUST00000033012 Ep300B2RWS6 2412 aa6.46□□□□□ -1.38
Copb1-201ENSMUST00000033012 Gm11565A2A4M7 156 aa6.46□□□□□ -1.38
Copb1-201ENSMUST00000033012 Vpreb3D3Z6J4 130 aa6.46□□□□□ -1.38
Copb1-201ENSMUST00000033012 Akap13E9Q394 2776 aa6.46□□□□□ -1.38
Copb1-201ENSMUST00000033012 Gm16485Q8C4B7 115 aa6.45□□□□□ -1.38
Copb1-201ENSMUST00000033012 Plac8Q9JI48 112 aa6.45□□□□□ -1.38
Copb1-201ENSMUST00000033012 OtogO55225 2910 aa6.44□□□□□ -1.38
Copb1-201ENSMUST00000033012 SonQ9QX47 2444 aaKnown RBP6.44□□□□□ -1.38
Copb1-201ENSMUST00000033012 Gm20661K7N787 53 aa6.44□□□□□ -1.38
Copb1-201ENSMUST00000033012 Ccl21bP86792 133 aa6.44□□□□□ -1.38
Copb1-201ENSMUST00000033012 Ccl21cP86793 133 aa6.44□□□□□ -1.38
Copb1-201ENSMUST00000033012 Lrrk2Q5S006 2527 aa6.44□□□□□ -1.38
Copb1-201ENSMUST00000033012 Reg3aO09037 175 aa6.43□□□□□ -1.38
Copb1-201ENSMUST00000033012 Wfdc13Q5DQQ6 81 aa6.43□□□□□ -1.38
Copb1-201ENSMUST00000033012 Lce6aD3YV94 81 aa6.43□□□□□ -1.38
Copb1-201ENSMUST00000033012 Camk2n2Q78WH7 79 aa6.43□□□□□ -1.38
Copb1-201ENSMUST00000033012 Sprr4Q8CGN8 76 aa6.43□□□□□ -1.38
Copb1-201ENSMUST00000033012 Igkv3-12A0A140T8P0 119 aa6.42□□□□□ -1.38
Copb1-201ENSMUST00000033012 NbasE9Q411 2356 aa6.41□□□□□ -1.38
Copb1-201ENSMUST00000033012 1700018G05RikA0A1B0GSI2 66 aa6.41□□□□□ -1.38
Copb1-201ENSMUST00000033012 Zfyve26Q5DU37 2529 aa6.41□□□□□ -1.38
Copb1-201ENSMUST00000033012 Dmac1Q9CQ00 111 aa6.4□□□□□ -1.38
Copb1-201ENSMUST00000033012 2310034C09RikQ9D746 214 aa6.4□□□□□ -1.38
Copb1-201ENSMUST00000033012 Prol1E9PYQ4 312 aa6.39□□□□□ -1.39
Copb1-201ENSMUST00000033012 Hivep3A2A884 2348 aa6.38□□□□□ -1.39
Copb1-201ENSMUST00000033012 Gm2310J3QNJ2 377 aa6.38□□□□□ -1.39
Copb1-201ENSMUST00000033012 P84750 121 aa6.37□□□□□ -1.39
Copb1-201ENSMUST00000033012 BC067074F6RXI4 2391 aa6.37□□□□□ -1.39
Copb1-201ENSMUST00000033012 Mapk1ip1lQ8BH93 242 aa6.36□□□□□ -1.39
Copb1-201ENSMUST00000033012 Rpl37aP61514 92 aa6.36□□□□□ -1.39
Copb1-201ENSMUST00000033012 Itpr3P70227 2670 aa6.35□□□□□ -1.39
Copb1-201ENSMUST00000033012 Ighv8-13A0A075B5Y0 101 aa6.35□□□□□ -1.39
Copb1-201ENSMUST00000033012 Leap2Q91V13 76 aa6.35□□□□□ -1.39
Copb1-201ENSMUST00000033012 Myo9aQ8C170 2542 aa6.35□□□□□ -1.39
Copb1-201ENSMUST00000033012 Xirp2Q4U4S6 3784 aa6.35□□□□□ -1.39
Copb1-201ENSMUST00000033012 Gm10267M0QWD8 85 aa6.34□□□□□ -1.39
Copb1-201ENSMUST00000033012 Ankrd17Q99NH0 2603 aaKnown RBP6.34□□□□□ -1.39
Copb1-201ENSMUST00000033012 Limd2Q8BGB5 128 aa6.34□□□□□ -1.39
Copb1-201ENSMUST00000033012 Usp9xP70398 2559 aaKnown RBP6.34□□□□□ -1.4
Copb1-201ENSMUST00000033012 Utp20Q5XG71 2788 aaKnown RBP6.32□□□□□ -1.4
Copb1-201ENSMUST00000033012 Cypt15B1AXS0 87 aa6.32□□□□□ -1.4
Copb1-201ENSMUST00000033012 TgO08710 2766 aa6.32□□□□□ -1.4
Copb1-201ENSMUST00000033012 Odf3bQ5M8M2 238 aa6.32□□□□□ -1.4
Copb1-201ENSMUST00000033012 Chchd10Q7TNL9 138 aa6.31□□□□□ -1.4
Copb1-201ENSMUST00000033012 D730001G18RikA0A087WQU7 115 aa6.31□□□□□ -1.4
Copb1-201ENSMUST00000033012 Ndufs5Q99LY9 106 aa6.31□□□□□ -1.4
Copb1-201ENSMUST00000033012 Snhg11Q4G0K9 87 aa6.3□□□□□ -1.4
Copb1-201ENSMUST00000033012 Gm28230A0A0A0MQ91 144 aa6.3□□□□□ -1.4
Copb1-201ENSMUST00000033012 Setd2E9Q5F9 2537 aa6.3□□□□□ -1.4
Copb1-201ENSMUST00000033012 Uqcr11Q9CPX8 56 aa6.3□□□□□ -1.4
Copb1-201ENSMUST00000033012 Spata3Q9D9T6 193 aa6.29□□□□□ -1.4
Copb1-201ENSMUST00000033012 Gm12216A0A1W2P827 62 aa6.28□□□□□ -1.4
Copb1-201ENSMUST00000033012 Wfdc6bF6ULY1 148 aa6.28□□□□□ -1.4
Copb1-201ENSMUST00000033012 Cypt14J3QPF7 87 aa6.28□□□□□ -1.4
Copb1-201ENSMUST00000033012 Gm11627A6PWP4 55 aa6.27□□□□□ -1.41
Copb1-201ENSMUST00000033012 Obox2E9PXV9 151 aa6.27□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms