RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Obsl1D3YYU8 1804 aaKnown RBP7.99□□□□□ -1.13
Rtn3-202ENSMUST00000065304 Tcf20Q9EPQ8 1987 aa7.99□□□□□ -1.13
Rtn3-202ENSMUST00000065304 D730001G18RikA0A087WQU7 115 aa7.99□□□□□ -1.13
Rtn3-202ENSMUST00000065304 Pla2g2eQ9QUL3 142 aa7.98□□□□□ -1.13
Rtn3-202ENSMUST00000065304 Spink13Q3UTS8 97 aa7.98□□□□□ -1.13
Rtn3-202ENSMUST00000065304 Cdc42se1Q8BHL7 80 aa7.98□□□□□ -1.13
Rtn3-202ENSMUST00000065304 CrygaP04345 174 aa7.97□□□□□ -1.13
Rtn3-202ENSMUST00000065304 Pcnx3Q8VI59 2028 aa7.97□□□□□ -1.13
Rtn3-202ENSMUST00000065304 NrgnP60761 78 aa7.96□□□□□ -1.13
Rtn3-202ENSMUST00000065304 Tmem131O70472 1877 aa7.95□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Q9DAB9 146 aa7.95□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Crip3Q6Q6R3 243 aa7.94□□□□□ -1.14
Rtn3-202ENSMUST00000065304 AI606181Q8C7B9 129 aa7.94□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Gm9767G3X930 207 aa7.94□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Gm10837Q3UTT8 145 aa7.93□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Lrrk2Q5S006 2527 aa7.93□□□□□ -1.14
Rtn3-202ENSMUST00000065304 AgrnA2ASQ1 1950 aa7.93□□□□□ -1.14
Rtn3-202ENSMUST00000065304 1700018G05RikA0A1B0GSI2 66 aa7.92□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Gm11627A6PWP4 55 aa7.92□□□□□ -1.14
Rtn3-202ENSMUST00000065304 MgamB5THE2 1827 aa7.92□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Uqcr11Q9CPX8 56 aa7.92□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Fer1l4A3KGK3 1992 aa7.92□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Pkd1l2Q7TN88 2461 aa7.92□□□□□ -1.14
Rtn3-202ENSMUST00000065304 UtrnE9Q6R7 3430 aa7.92□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Gm3443F7CCV5 94 aa7.91□□□□□ -1.14
Rtn3-202ENSMUST00000065304 CriptO70333 101 aa7.9□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Pla2g2cP48076 150 aa7.9□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Ankhd1E9PUR0 2548 aaKnown RBP7.9□□□□□ -1.14
Rtn3-202ENSMUST00000065304 Dennd4cA6H8H2 1906 aa7.9□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Phxr4P15974 95 aa7.9□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Elof1P60003 83 aa7.89□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Nup210Q9QY81 1886 aaKnown RBP7.89□□□□□ -1.15
Rtn3-202ENSMUST00000065304 A930009A15RikG3UYI6 118 aa7.89□□□□□ -1.15
Rtn3-202ENSMUST00000065304 DscamQ9ERC8 2013 aa7.88□□□□□ -1.15
Rtn3-202ENSMUST00000065304 3110070M22RikQ9DAQ7 118 aa7.88□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Dmac1Q9CQ00 111 aa7.88□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Notch4P31695 1964 aa7.88□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Col5a3Q9JLI2 1739 aa7.88□□□□□ -1.15
Rtn3-202ENSMUST00000065304 HelzQ6DFV5 1964 aaKnown RBP7.87□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Adamts9E9PUN6 1931 aa7.87□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Zfp462B1AWL2 2495 aaKnown RBP7.87□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Plxna2P70207 1894 aa7.87□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Gm44790A0A0N4SV91 103 aa7.87□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Cd164l2Q9D6W7 172 aa7.87□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Gm26661M0QWV4 156 aa7.87□□□□□ -1.15
Rtn3-202ENSMUST00000065304 1110002E22RikE0CYV9 1786 aa7.86□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Gm9903Q8C9Y8 129 aa7.85□□□□□ -1.15
Rtn3-202ENSMUST00000065304 7530416G11RikJ3QJX6 159 aa7.85□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Coa5Q99M07 74 aa7.85□□□□□ -1.15
Rtn3-202ENSMUST00000065304 LctF8VPT3 1931 aa7.85□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Gm10642Q3TWM1 71 aa7.85□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Gm10300Q8C8P7 189 aa7.85□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Tanc2A2A690 1994 aa7.84□□□□□ -1.15
Rtn3-202ENSMUST00000065304 Znf575Q3TXZ1 239 aa7.84□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Gpr15lA0A0B4J1N3 78 aa7.83□□□□□ -1.16
Rtn3-202ENSMUST00000065304 AvpP35455 168 aa7.83□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Pla2g10Q9QXX3 151 aa7.83□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Gm17689B3GLJ4 109 aa7.83□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Gm10308Q9CVR5 141 aa7.82□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Defb10Q8R2I8 73 aa7.81□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Gm42715A0A087WP63 3095 aaKnown RBP7.81□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Pcdh15Q99PJ1 1943 aa7.81□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Gm5464Q3UY29 175 aa7.81□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Gm16181B0V2H2 73 aa7.8□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Atg2aQ6P4T0 1914 aa7.8□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Znf580Q9DB38 172 aa7.79□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Anapc1P53995 1944 aaKnown RBP7.79□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Phxr5P08399 672 aa7.78□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Defb1P56386 69 aa7.78□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Arhgap21Q6DFV3 1944 aa7.78□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Wisp2Q9Z0G4 251 aa7.78□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Alms1Q8K4E0 3251 aa7.78□□□□□ -1.16
Rtn3-202ENSMUST00000065304 Ptpn13Q64512 2453 aa7.77□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Eml5Q8BQM8 1977 aa7.76□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Psors1c2Q80ZC9 134 aa7.76□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Spaca4Q80ZQ0 127 aa7.75□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Gm27235Q3UW50 83 aa7.74□□□□□ -1.17
Rtn3-202ENSMUST00000065304 MobpQ9D2P8 170 aa7.74□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Tet2Q4JK59 1912 aaKnown RBP7.74□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Gm10770F7D043 238 aa7.74□□□□□ -1.17
Rtn3-202ENSMUST00000065304 AI854703Q8BIN3 203 aa7.74□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Col4a2P08122 1707 aa7.74□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Bri3P28662 125 aa7.73□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Gm5617Q91VN2 117 aa7.73□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Col4a6B1AVK5 1691 aa7.73□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Lce6aD3YV94 81 aa7.72□□□□□ -1.17
Rtn3-202ENSMUST00000065304 Q8BT88 171 aa7.7□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Rpl37aP61514 92 aa7.7□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Wdr90Q6ZPG2 1874 aa7.7□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Piezo1E2JF22 2547 aa7.69□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Rai1Q61818 1889 aa7.69□□□□□ -1.18
Rtn3-202ENSMUST00000065304 E130208F15RikQ3UPV3 143 aa7.69□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Prr9Q8BV84 116 aa7.68□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Defb2P82020 71 aa7.67□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Tln1P26039 2541 aaKnown RBP7.67□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Tns1E9Q0S6 1888 aaKnown RBP7.67□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Flg2Q2VIS4 2362 aa7.67□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Phf5aP83870 110 aaKnown RBP7.67□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Chd8Q09XV5 2582 aaKnown RBP7.65□□□□□ -1.18
Rtn3-202ENSMUST00000065304 Szt2A2A9C3 3431 aa7.65□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms