RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 4930519P11RikQ9CUJ8 166 aa13.4□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Gm28539A0A087WSL9 92 aa13.38□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Krtap11-1E9Q2E9 183 aa13.38□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Hbb-b2P02089 147 aa13.38□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Tenm4Q3UHK6 2771 aa13.38□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 MifP34884 115 aaKnown RBP13.37□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 2010109I03RikQ9CQ11 111 aa13.37□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Gm11213A0A1B0GR83 88 aa13.36□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Fbn1Q61554 2873 aaKnown RBP13.35□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Gm10518F6UQQ9 182 aa13.34□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Ntn5Q3UQ22 452 aa13.34□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 Igkv8-24A0A140T8P5 121 aa13.33□□□□□ -0.27
Ccdc34-201ENSMUST00000028580 EnhoQ8K1D8 76 aa13.33□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Itpr2Q9Z329 2701 aa13.33□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Igkv8-16A0A0G2JDG9 121 aa13.32□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Gm7102J3QQ10 178 aa13.32□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Hist1h4aP62806 103 aaKnown RBP13.31□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Ighv10-3A0A075B5T6 119 aa13.3□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Igkv3-1A0A075B5P1 119 aa13.29□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Igf1P05017 153 aa13.29□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 SmcpP15265 143 aa13.29□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Gm10320E9PW43 113 aa13.28□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Q9DAA7 145 aa13.28□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Reg3dQ9QUS9 175 aa13.28□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Ube2d4D3YUH6 135 aa13.28□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Apoc4Q61268 124 aa13.28□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Wfdc12Q9JHY3 85 aa13.28□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Ighv10-1A0A0B4J1J6 119 aa13.27□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Klk12B2RVZ0 247 aa13.27□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Gm10770F7D043 238 aa13.27□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Mrpl52Q9D0Y8 121 aa13.27□□□□□ -0.28
Ccdc34-201ENSMUST00000028580 Hivep3A2A884 2348 aa13.27□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Gm9805F6YK59 57 aa13.27□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Defa1P11477 93 aa13.26□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 AY074887Q8R5F9 132 aa13.26□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Gm17509Q9CZ61 145 aa13.25□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Igkv2-109A0A075B5K6 120 aa13.24□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Snhg11Q4G0K9 87 aa13.24□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Igkv4-92A0A0B4J1I2 117 aa13.24□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 PkigO70139 76 aa13.24□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Brwd1Q921C3 2304 aa13.23□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 E130208F15RikQ3UPV3 143 aa13.22□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Inafm2A0A1L1STD6 152 aa13.22□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 9530053A07RikE9PVG8 2581 aa13.21□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Igkv8-26A0A075B5N5 123 aa13.21□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Phxr5P08399 672 aa13.21□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Tmem254aP0DN89 123 aa13.21□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Tmem254bP0DN90 123 aa13.21□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Tmem254cP0DN91 123 aa13.21□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Rpl18aP62717 176 aaKnown RBP13.21□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 Gm10308Q9CVR5 141 aa13.21□□□□□ -0.29
Ccdc34-201ENSMUST00000028580 9430015G10RikA2ASP7 199 aa13.2□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Tex15F8VPN2 2785 aa13.2□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Igkv4-58A0A0G2JGI6 119 aa13.2□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 E130114P18RikF6S0S7 154 aa13.2□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Igkv8-34A0A0G2JDU0 121 aa13.19□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Ormdl1Q921I0 153 aa13.19□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Cox7b2Q9D2H1 82 aa13.19□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Nbeal2Q6ZQA0 2742 aa13.18□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Igkv8-27A0A0G2JF28 120 aa13.18□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Igkv8-30A0A140T8M3 121 aa13.18□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Defa25Q5G864 92 aa13.18□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Defa16P50714 93 aa13.17□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Gm5617Q91VN2 117 aa13.17□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Tenm1Q9WTS4 2731 aa13.17□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Smim20D3Z7Q2 69 aa13.16□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 AtrQ9JKK8 2635 aa13.15□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Ighv2-5A0A0A6YY69 116 aa13.15□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Igkv8-21A0A140T8P7 120 aa13.15□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 7530416G11RikJ3QJX6 159 aa13.15□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Ufsp1Q9CZP0 217 aa13.15□□□□□ -0.3
Ccdc34-201ENSMUST00000028580 Ighv13-2A0A0A6YWN3 119 aa13.14□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Msrb1Q9JLC3 116 aa13.14□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 A730009L09RikA0A1B0GS82 72 aa13.13□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 PolqQ8CGS6 2544 aa13.13□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 2310034G01RikA0A286YDL3 209 aa13.12□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Reg3bP35230 175 aa13.11□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Cystm1Q8K353 104 aa13.11□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Fn1P11276 2477 aaKnown RBP13.1□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Defa20Q45VN2 95 aa13.1□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 9530003J23RikQ8BM26 151 aa13.1□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Sprr4Q8CGN8 76 aa13.09□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Ubl5Q9EPV8 73 aa13.09□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Trav14-1A0A0G2JF94 121 aa13.09□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 Elof1P60003 83 aa13.09□□□□□ -0.31
Ccdc34-201ENSMUST00000028580 E130218I03RikA0A0U1RNU5 63 aa13.08□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 BC048502Q80Y74 154 aa13.08□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 FlnbQ80X90 2602 aaKnown RBP13.08□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Gm17577J3QNF7 156 aa13.08□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Lamtor3O88653 124 aa13.08□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 SvipQ3UZP4 77 aa13.08□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Pde6gP09174 87 aa13.07□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 AplnQ9R0R4 77 aa13.06□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Serp2Q6TAW2 65 aa13.06□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Camk2n2Q78WH7 79 aa13.06□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 A0A286YCN5 57 aa13.05□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Notch2O35516 2470 aa13.04□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Gm16181B0V2H2 73 aa13.04□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 ScxQ64124 207 aa13.04□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 4930535I16RikQ9CUI2 172 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 78.4 ms