RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Cystm1Q8K353 104 aa12.52□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Igkv8-18A0A0B4J1J3 123 aa12.52□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Klk12B2RVZ0 247 aa12.52□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Higd2aQ9CQJ1 106 aa12.52□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Igkv2-109A0A075B5K6 120 aa12.51□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Dnal4Q9DCM4 105 aa12.51□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 ApcQ61315 2845 aa12.5□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Hbb-b2P02089 147 aa12.5□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Defa20Q45VN2 95 aa12.5□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Klk11Q9QYN3 276 aa12.5□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 A830031A19RikQ8BNT5 113 aa12.5□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 4930535I16RikQ9CUI2 172 aa12.5□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 PolqQ8CGS6 2544 aa12.49□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Defa25Q5G864 92 aa12.49□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 AtrQ9JKK8 2635 aa12.47□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Dad1P61804 113 aa12.47□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Smim26Q3V460 107 aa12.47□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Igkv3-9A0A140T8P4 119 aa12.47□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Gm10518F6UQQ9 182 aa12.46□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Tmem86bQ497J1 226 aa12.46□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Gm867A0A1W2P7T4 151 aa12.45□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Igkv4-58A0A0G2JGI6 119 aa12.45□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Q9DAA7 145 aa12.44□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Igkv8-16A0A0G2JDG9 121 aa12.44□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Psors1c2Q80ZC9 134 aa12.44□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Igkv8-24A0A140T8P5 121 aa12.43□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 7530416G11RikJ3QJX6 159 aa12.43□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Itpr2Q9Z329 2701 aa12.42□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 ScxQ64124 207 aa12.42□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 CnbpP53996 178 aaKnown RBP12.42□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 E130208F15RikQ3UPV3 143 aa12.42□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 D130052B06RikQ3UW13 202 aa12.42□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Defa2P28309 93 aa12.4□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Hist1h4aP62806 103 aaKnown RBP12.4□□□□□ -0.42
Ccdc3-201ENSMUST00000027988 Gm9903Q8C9Y8 129 aa12.39□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 A0A286YCN5 57 aa12.39□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 EnhoQ8K1D8 76 aa12.39□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Reg3dQ9QUS9 175 aa12.39□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Gm3618D3Z4P5 127 aa12.38□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Gm2916Q9D9B9 127 aa12.38□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Gm20726G3UX18 150 aa12.38□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Ighv2-9A0A075B5Q5 116 aa12.37□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Gm7138L7N2C3 230 aa12.37□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 P01819 144 aa12.37□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Rpl18aP62717 176 aaKnown RBP12.37□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Gm3238W4VSP7 230 aa12.37□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Scgb1b2O35176 93 aa12.37□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Notch2O35516 2470 aa12.36□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Igkv8-27A0A0G2JF28 120 aa12.35□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Igkv8-30A0A140T8M3 121 aa12.35□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Tcl1b3P56842 122 aa12.35□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Csdc2Q91YQ3 154 aa12.35□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 4930556J24RikQ9D4U7 146 aa12.35□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Gm11213A0A1B0GR83 88 aa12.35□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Gm9805F6YK59 57 aa12.35□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Kmt2aP55200 3966 aa12.35□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Cox7bP56393 80 aa12.34□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Naa38Q9D2U5 125 aa12.34□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Notch1Q01705 2531 aa12.34□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Klk9Q32M27 251 aa12.34□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Igkv8-21A0A140T8P7 120 aa12.34□□□□□ -0.43
Ccdc3-201ENSMUST00000027988 Stab1Q8R4Y4 2571 aa12.33□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Ighv13-2A0A0A6YWN3 119 aa12.33□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Ntn5Q3UQ22 452 aa12.33□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Ighv10-3A0A075B5T6 119 aa12.32□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 E130218I03RikA0A0U1RNU5 63 aa12.32□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Hivep1Q03172 2688 aa12.32□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Igkv3-1A0A075B5P1 119 aa12.31□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 AY074887Q8R5F9 132 aa12.31□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Snhg11Q4G0K9 87 aa12.3□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Fam19a1Q7TPG8 133 aa12.3□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Ube2d4D3YUH6 135 aa12.29□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Msrb1Q9JLC3 116 aa12.29□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Srrm2Q8BTI8 2703 aaKnown RBP12.28□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Ighv8-13A0A075B5Y0 101 aa12.28□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Fam229bQ8CF36 80 aa12.28□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 MplkipQ9D011 178 aa12.28□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 A730009L09RikA0A1B0GS82 72 aa12.27□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Defa7P50705 93 aa12.27□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 4930518I15RikQ3V2W7 57 aa12.27□□□□□ -0.44
Ccdc3-201ENSMUST00000027988 Igkv8-26A0A075B5N5 123 aa12.27□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Gm10770F7D043 238 aa12.26□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Tmem254aP0DN89 123 aa12.26□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Tmem254bP0DN90 123 aa12.26□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Tmem254cP0DN91 123 aa12.26□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 PtprqP0C5E4 2300 aa12.25□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Defb37Q7TMD2 62 aa12.25□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Cmc4Q61908 68 aa12.24□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Gm10308Q9CVR5 141 aa12.24□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Mrpl52Q9D0Y8 121 aa12.24□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Igkv1-88A0A140T8N1 120 aa12.24□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 2310034G01RikA0A286YDL3 209 aa12.24□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Ufsp1Q9CZP0 217 aa12.24□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Col6a5A6H584 2640 aa12.23□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Ormdl1Q921I0 153 aa12.23□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Ighv10-1A0A0B4J1J6 119 aa12.23□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 A730071L15RikQ8C4X0 137 aa12.22□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Smim29Q8R043 75 aa12.22□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Dnah3Q8BW94 4083 aa12.21□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 Tcl1b5P56845 121 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms