RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 AplnQ9R0R4 77 aa6.9□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Ighv1-59A0A0A6YXE0 117 aa6.9□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Wfdc11A2A5H7 82 aa6.9□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Zfand3Q497H0 227 aa6.9□□□□□ -1.3
Col6a5-201ENSMUST00000165165 9130230L23RikQ8CC80 163 aa6.9□□□□□ -1.3
Col6a5-201ENSMUST00000165165 UqcrqQ9CQ69 82 aa6.9□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Smim1P0C8K7 78 aa6.9□□□□□ -1.31
Col6a5-201ENSMUST00000165165 SonQ9QX47 2444 aaKnown RBP6.89□□□□□ -1.31
Col6a5-201ENSMUST00000165165 P04944 107 aa6.89□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Gm21060J3KMU4 56 aa6.89□□□□□ -1.31
Col6a5-201ENSMUST00000165165 1600014C23RikQ9DAX4 101 aa6.89□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Fgfbp3Q1HCM0 245 aa6.89□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Chchd10Q7TNL9 138 aa6.88□□□□□ -1.31
Col6a5-201ENSMUST00000165165 TshbP12656 138 aa6.88□□□□□ -1.31
Col6a5-201ENSMUST00000165165 CdsnQ7TPC1 561 aa6.88□□□□□ -1.31
Col6a5-201ENSMUST00000165165 RetnlbQ99P86 105 aa6.88□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Sprr3O09116 238 aa6.88□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Col5a1O88207 1838 aa6.88□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Cep295Q8BQ48 2412 aa6.87□□□□□ -1.31
Col6a5-201ENSMUST00000165165 E030018B13RikJ3QMS9 113 aa6.87□□□□□ -1.31
Col6a5-201ENSMUST00000165165 4930556J24RikQ9D4U7 146 aa6.87□□□□□ -1.31
Col6a5-201ENSMUST00000165165 1700011M02RikB1AX35 88 aa6.87□□□□□ -1.31
Col6a5-201ENSMUST00000165165 4930519P11RikQ9CUJ8 166 aa6.87□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Cd164Q9R0L9 197 aa6.87□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Gm26566Q8CAC1 153 aa6.86□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Sostdc1Q9CQN4 206 aa6.86□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Pla2g1bQ9Z0Y2 146 aa6.86□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Shisa2Q8QZV2 295 aa6.86□□□□□ -1.31
Col6a5-201ENSMUST00000165165 MsmpB1AWI6 139 aa6.86□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Cyyr1Q8VIH7 165 aa6.86□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Gm16223Q8CBM3 117 aa6.85□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Defb39Q70KL3 74 aa6.85□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Nsun4C4P6S0 806 aaKnown RBP6.85□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Igkv8-27A0A0G2JF28 120 aa6.84□□□□□ -1.31
Col6a5-201ENSMUST00000165165 CstadQ9D245 104 aa6.84□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Gm10322F7D7I4 111 aa6.84□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Fhl2O70433 279 aa6.84□□□□□ -1.31
Col6a5-201ENSMUST00000165165 NbasE9Q411 2356 aa6.84□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Gm5142Q8C5X9 133 aa6.84□□□□□ -1.31
Col6a5-201ENSMUST00000165165 Spry4Q9WTP2 300 aa6.84□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm21748Q3UE70 102 aa6.83□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Prol1E9PYQ4 312 aa6.83□□□□□ -1.32
Col6a5-201ENSMUST00000165165 SbsponQ3UPR9 264 aa6.83□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm20708H3BKF4 155 aa6.83□□□□□ -1.32
Col6a5-201ENSMUST00000165165 BC025920Q3US60 128 aa6.83□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Chchd7Q8K2Q5 85 aa6.83□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Ntn5Q3UQ22 452 aa6.82□□□□□ -1.32
Col6a5-201ENSMUST00000165165 4930524J08RikQ9CUJ5 163 aa6.82□□□□□ -1.32
Col6a5-201ENSMUST00000165165 PrlhG3UWC3 86 aa6.82□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm20661K7N787 53 aa6.82□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Ep300B2RWS6 2412 aa6.82□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm10490F6VBM2 120 aa6.81□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Ighv1-66A0A075B5X5 117 aa6.81□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Ighv2-3A0A075B696 115 aa6.81□□□□□ -1.32
Col6a5-201ENSMUST00000165165 SrarpQ3ULG3 163 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 2310009B15RikA0A0A6YWI4 143 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Q9CX25 107 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Cdc42se2Q8BGH7 84 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Znf414Q9DCK4 299 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm17509Q9CZ61 145 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Znf239P24399 201 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm28230A0A0A0MQ91 144 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm28374F6SG70 93 aa6.8□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Ly6g6cQ9Z1Q4 126 aa6.79□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Myo9aQ8C170 2542 aa6.79□□□□□ -1.32
Col6a5-201ENSMUST00000165165 BC067074F6RXI4 2391 aa6.78□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Defb42Q8BVB5 75 aa6.78□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Defb50Q6TU36 73 aa6.78□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm10999F6Q4M4 69 aa6.78□□□□□ -1.32
Col6a5-201ENSMUST00000165165 Gm10160F6Y577 67 aa6.77□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Rnase13Q5GAM7 153 aa6.77□□□□□ -1.33
Col6a5-201ENSMUST00000165165 NrgnP60761 78 aa6.77□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Coa6Q8BGD8 79 aa6.77□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Reg3aO09037 175 aa6.77□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Defb1P56386 69 aa6.77□□□□□ -1.33
Col6a5-201ENSMUST00000165165 4930518I15RikQ3V2W7 57 aa6.76□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Gm10197F6QEY5 67 aa6.76□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Mrpl34Q99N91 92 aa6.76□□□□□ -1.33
Col6a5-201ENSMUST00000165165 4930432M17RikQ3V0W9 174 aa6.75□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Pla2g2dQ9WVF6 144 aa6.75□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Cox6a2P43023 97 aa6.75□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Gm10509O88255 85 aa6.75□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Zfand2aQ9JII7 171 aa6.75□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Limd2Q8BGB5 128 aa6.74□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Ighv2-5A0A0A6YY69 116 aa6.74□□□□□ -1.33
Col6a5-201ENSMUST00000165165 P01659 112 aa6.74□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Gm10845Q3UNY9 185 aa6.74□□□□□ -1.33
Col6a5-201ENSMUST00000165165 A930002H24RikQ8C8Y3 163 aa6.73□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Gm16485Q8C4B7 115 aa6.73□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Polr2kQ63871 58 aa6.72□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Pkd1l2Q7TN88 2461 aa6.72□□□□□ -1.33
Col6a5-201ENSMUST00000165165 A530084C06RikQ3UTW2 186 aa6.72□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Pla2g10Q9QXX3 151 aa6.72□□□□□ -1.33
Col6a5-201ENSMUST00000165165 Nav2E9Q842 2432 aa6.71□□□□□ -1.33
Col6a5-201ENSMUST00000165165 6430550D23RikE9Q1X6 194 aa6.71□□□□□ -1.34
Col6a5-201ENSMUST00000165165 E130116L18RikQ8BMV6 101 aa6.71□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Col4a6B1AVK5 1691 aa6.71□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Gm10226O88253 85 aa6.71□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Msrb1Q9JLC3 116 aa6.71□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Lmo4P61969 165 aa6.7□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms