RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 FlnbQ80X90 2602 aaKnown RBP11.76□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Fhl2O70433 279 aa11.76□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Trav14-1A0A0G2JF94 121 aa11.76□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Cd27P41272 250 aa11.74□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 CrygfQ9CXV3 174 aa11.74□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Igkv8-21A0A140T8P7 120 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 BaalcQ8VHV1 145 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 TroQ6DIC6 2087 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Ighv3-3A0A0A6YWL2 116 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Ly6gP35461 111 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 5730596B20RikQ8BQ08 205 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 H2al1aQ5M8Q2 105 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 H2al1eQ810S6 105 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 PscaP57096 123 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Polr2kQ63871 58 aa11.72□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Zfp292Q9Z2U2 2698 aa11.72□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Kiaa1549Q68FD9 1940 aa11.72□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 1700011M02RikB1AX35 88 aa11.71□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Ovol3D3YYM0 189 aa11.71□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 1700074P13RikQ9D9G7 251 aa11.71□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 LhbO09108 141 aa11.71□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 SrarpQ3ULG3 163 aa11.7□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Dnah12Q3V0Q1 3086 aa11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Gm10490F6VBM2 120 aa11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 4930564D02RikQ9D4S4 103 aa11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Ube2d1P61080 147 aaKnown RBP11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 CdsnQ7TPC1 561 aa11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Bri3P28662 125 aa11.68□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Cox8cA6H666 72 aa11.68□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Epg5Q80TA9 2572 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Obox2E9PXV9 151 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Ighv1-59A0A0A6YXE0 117 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Gm9573F7C950 1606 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Col27a1Q5QNQ9 1845 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 2310009B15RikA0A0A6YWI4 143 aa11.66□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 1700056E22RikF7CNM6 234 aa11.66□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Myo18bE9PV66 2605 aa11.66□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Tcl1b5P56845 121 aa11.66□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Ndufb1P0DN34 57 aa11.65□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Gm10577Q3UDV9 132 aa11.65□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Trbv13-2A0A140T8N6 113 aa11.64□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Wfdc10Q3V2J9 124 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm10322F7D7I4 111 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Wfdc13Q5DQQ6 81 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Wfdc15aQ8BH89 80 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 PolqQ8CGS6 2544 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Cep350E9Q309 3095 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Igkv3-12A0A140T8P0 119 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 CnfnQ6PCW6 111 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm11011D3Z3L9 86 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm3250E9Q1M3 230 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Shisa2Q8QZV2 295 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Ccdc179J3QM76 67 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm26566Q8CAC1 153 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 A0A286YE49 62 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 P84750 121 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Lama3Q61789 3330 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 PtprbB2RU80 1998 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm10337F7DEP7 55 aa11.6□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Cdc42se2Q8BGH7 84 aa11.6□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Chchd7Q8K2Q5 85 aa11.6□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gpha2Q925Q5 128 aa11.59□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm10509O88255 85 aa11.58□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Defb42Q8BVB5 75 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm20604F8WIA3 75 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 H2al1mQ9DAD9 105 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Defb38Q7TNV7 63 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm19935A0A1B0GSF9 52 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ube2d3P61079 147 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ube2d2P62838 147 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm9922Q8C3P1 144 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Arhgap32Q811P8 2089 aa11.56□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 4930524J08RikQ9CUJ5 163 aa11.56□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Nupr2Q497P3 102 aa11.56□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 SycnQ8VCK7 134 aa11.56□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 CrygeQ03740 174 aa11.55□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ly6g6cQ9Z1Q4 126 aa11.55□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm10267M0QWD8 85 aa11.55□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 B430305J03RikQ8BQQ8 176 aa11.55□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Spink13Q3UTS8 97 aa11.54□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Igkv8-30A0A140T8M3 121 aa11.53□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 A930009A15RikG3UYI6 118 aa11.53□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 A830031A19RikQ8BNT5 113 aa11.53□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 B230217C12RikE9Q3Z1 139 aa11.53□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 CicQ924A2 2510 aa11.52□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ankrd11E9Q4F7 2643 aa11.52□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 P06329 120 aa11.52□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm5142Q8C5X9 133 aa11.52□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ifitm6A0A1B0GS75 124 aa11.52□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Gm10135F6TEE5 83 aa11.52□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 TeppQ6IMH0 216 aa11.52□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Gm3443F7CCV5 94 aa11.51□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Pla2g1bQ9Z0Y2 146 aa11.51□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Serp1Q9Z1W5 66 aa11.5□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Rpl28P41105 137 aaKnown RBP11.5□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Gm5464Q3UY29 175 aa11.5□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Prune2Q52KR3 3084 aa11.5□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 H2al1kJ3QP08 105 aa11.49□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Crip2Q9DCT8 208 aaKnown RBP11.49□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Prr9Q8BV84 116 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 72.4 ms