RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Rpl36aP83882 106 aaKnown RBP11.67□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 CubnQ9JLB4 3623 aa11.67□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 Notch2O35516 2470 aa11.66□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 Gm815Q3UWS2 115 aa11.66□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 Mapk1ip1lQ8BH93 242 aa11.66□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 SnurfQ9WU12 71 aa11.66□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 Ighv2-6-8A0A0A6YWY9 116 aa11.66□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 Mrpl55Q9CZ83 127 aa11.66□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 Ifitm1Q9D103 106 aa11.66□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 Klk1b4P00757 256 aa11.65□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 Prh1P05142 261 aa11.65□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 4930524J08RikQ9CUJ5 163 aa11.65□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 4930442H23RikQ9D5G7 103 aa11.65□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 1700010B08RikQ9DAI7 102 aa11.65□□□□□ -0.54
Prpf40b-212ENSMUST00000145482 BikO70337 150 aa11.64□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Serp2Q6TAW2 65 aa11.64□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Igkv2-109A0A075B5K6 120 aa11.63□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Gm10322F7D7I4 111 aa11.63□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 4930470P17RikQ9D542 155 aa11.63□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Igkv4-79A0A075B5L8 119 aa11.63□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 CicQ924A2 2510 aa11.63□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Gm3233E9Q2H5 230 aa11.62□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Cox6b1P56391 86 aaKnown RBP11.62□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Fam19a1Q7TPG8 133 aa11.62□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 EnhoQ8K1D8 76 aa11.62□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Timm17bQ9Z0V7 172 aa11.62□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Trbv30A0A0B4J1P1 111 aa11.61□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Ighv1-11A0A0A6YWI9 117 aa11.61□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Igkv1-117A0A140T8M0 119 aa11.61□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 GhrhP16043 103 aa11.61□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 P01738 130 aa11.6□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Ighv1-62-1A0A075B5U3 116 aa11.6□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Trav9d-3A0A075B695 113 aa11.6□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Gm16381A0A1Y7VKT9 73 aa11.6□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 NipblQ6KCD5 2798 aaKnown RBP11.59□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Rpl28P41105 137 aaKnown RBP11.59□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Trav4-3A0A0B4J1K1 110 aa11.58□□□□□ -0.55
Prpf40b-212ENSMUST00000145482 Tmem258P61166 79 aa11.58□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Gm10226O88253 85 aa11.57□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Crlf1Q9JM58 425 aa11.57□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 9530053A07RikE9PVG8 2581 aa11.57□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Igkv4-53A0A0G2JFC6 119 aa11.57□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Mrpl52Q9D0Y8 121 aa11.57□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 P01755 137 aa11.56□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Trav13d-4A0A0G2JFX3 110 aa11.55□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 P06329 120 aa11.55□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Klk12B2RVZ0 247 aa11.55□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Gm10509O88255 85 aa11.55□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 A830031A19RikQ8BNT5 113 aa11.55□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Erdr1J3QMM0 206 aa11.55□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Fam229bQ8CF36 80 aa11.55□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 P01745 121 aa11.54□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Vmo1Q5SXG7 201 aa11.54□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Ighv13-2A0A0A6YWN3 119 aa11.54□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 4930519P11RikQ9CUJ8 166 aa11.54□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Vpreb1P13372 142 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Lage3Q9CR70 148 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Tomm7Q9D173 55 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Nsd1O88491 2588 aaKnown RBP11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Ank2Q8C8R3 3898 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Ighv1-63A0A075B5X2 117 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Fhl2O70433 279 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 P01786 117 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Cops9Q3U898 57 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 BsnO88737 3942 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Tmem254aP0DN89 123 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Tmem254bP0DN90 123 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Tmem254cP0DN91 123 aa11.53□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 A930009A15RikG3UYI6 118 aa11.52□□□□□ -0.56
Prpf40b-212ENSMUST00000145482 Ighv5-9-1A0A0A6YVS4 126 aa11.52□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Ighv1-49A0A0A6YWX2 117 aa11.52□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Trbv13-2A0A140T8N6 113 aa11.52□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Hivep1Q03172 2688 aa11.51□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Rpl35aO55142 110 aa11.51□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Trav13-2A0A075B649 110 aa11.5□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Nop10Q9CQS2 64 aa11.5□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 4930564D02RikQ9D4S4 103 aa11.5□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Gm28374F6SG70 93 aa11.5□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Krtap27-1E9PX37 202 aa11.49□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 PrlhG3UWC3 86 aa11.49□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Cox7a1P56392 80 aa11.49□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Rps28P62858 69 aaKnown RBP11.49□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Rpl39lQ9CQD0 51 aa11.49□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Gm19935A0A1B0GSF9 52 aa11.49□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Srsf12Q8C8K3 266 aa11.49□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Fxyd5P97808 178 aa11.48□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Rnf152Q8BG47 203 aa11.48□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Rbm3O89086 153 aaKnown RBP11.47□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Tenm4Q3UHK6 2771 aa11.47□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Igkv4-68A0A0B4J1I7 117 aa11.47□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Ighv1-61P01749 117 aa11.47□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Tmem223Q9CQE2 199 aaKnown RBP11.47□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Fbn1Q61554 2873 aaKnown RBP11.46□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Defa28D3Z1V9 94 aa11.46□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Igkv1-99F6XWB2 120 aa11.46□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 Xirp2Q4U4S6 3784 aa11.46□□□□□ -0.57
Prpf40b-212ENSMUST00000145482 E130218I03RikA0A0U1RNU5 63 aa11.46□□□□□ -0.58
Prpf40b-212ENSMUST00000145482 2010109I03RikQ9CQ11 111 aa11.45□□□□□ -0.58
Prpf40b-212ENSMUST00000145482 9430015G10RikA2ASP7 199 aa11.45□□□□□ -0.58
Prpf40b-212ENSMUST00000145482 Ube2d4D3YUH6 135 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms