RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 NpwA0A1L1STR8 176 aa12.12□□□□□ -0.47
Shroom3-201ENSMUST00000113051 AcanQ61282 2132 aaKnown RBP12.12□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Q8K1L6 76 aa12.12□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Gm9922Q8C3P1 144 aa12.12□□□□□ -0.47
Shroom3-201ENSMUST00000113051 A930009A15RikG3UYI6 118 aa12.11□□□□□ -0.47
Shroom3-201ENSMUST00000113051 CdsnQ7TPC1 561 aa12.11□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Gm16485Q8C4B7 115 aa12.11□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Chchd7Q8K2Q5 85 aa12.11□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Arid1bE9Q4N7 2244 aa12.1□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Gm10300Q8C8P7 189 aa12.1□□□□□ -0.47
Shroom3-201ENSMUST00000113051 C130032M10RikQ8C888 123 aa12.1□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Atox1O08997 68 aaKnown RBP12.09□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Ighv2-6A0A075B6A7 116 aa12.09□□□□□ -0.47
Shroom3-201ENSMUST00000113051 A0A286YE49 62 aa12.09□□□□□ -0.47
Shroom3-201ENSMUST00000113051 NbasE9Q411 2356 aa12.09□□□□□ -0.47
Shroom3-201ENSMUST00000113051 1700056E22RikF7CNM6 234 aa12.08□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Serp1Q9Z1W5 66 aa12.07□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Adamts20P59511 1906 aa12.07□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Gm3250E9Q1M3 230 aa12.07□□□□□ -0.48
Shroom3-201ENSMUST00000113051 B230217C12RikE9Q3Z1 139 aa12.07□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Cdc42se2Q8BGH7 84 aa12.06□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Gm3443F7CCV5 94 aa12.06□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Atp5eP56382 52 aa12.06□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Igkv8-19A0A0G2JFN8 121 aa12.05□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Ighv2-9A0A075B5Q5 116 aa12.04□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Gm10509O88255 85 aa12.03□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Ifitm6A0A1B0GS75 124 aa12.03□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Ndufc1Q9CQY9 76 aa12.03□□□□□ -0.48
Shroom3-201ENSMUST00000113051 Kiaa1549Q68FD9 1940 aa12.02□□□□□ -0.49
Shroom3-201ENSMUST00000113051 AcacbE9Q4Z2 2448 aa12.02□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Srsf12Q8C8K3 266 aa12.01□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Ighv1-56A0A0A6YXG2 117 aa12.01□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Gm26566Q8CAC1 153 aa12.01□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Pkd1l2Q7TN88 2461 aa11.99□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Trav14-1A0A0G2JF94 121 aa11.99□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Pou2af1Q64693 256 aa11.99□□□□□ -0.49
Shroom3-201ENSMUST00000113051 SrcapA0A087WQ44 3271 aa11.99□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Timm17bQ9Z0V7 172 aa11.98□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Arhgap32Q811P8 2089 aa11.97□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Vpreb1P13372 142 aa11.97□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Polr2kQ63871 58 aa11.97□□□□□ -0.49
Shroom3-201ENSMUST00000113051 2310009B15RikA0A0A6YWI4 143 aa11.96□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Gm20604F8WIA3 75 aa11.96□□□□□ -0.49
Shroom3-201ENSMUST00000113051 H2al1kJ3QP08 105 aa11.96□□□□□ -0.49
Shroom3-201ENSMUST00000113051 BtcQ05928 177 aa11.96□□□□□ -0.49
Shroom3-201ENSMUST00000113051 Tns1E9Q0S6 1888 aaKnown RBP11.96□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Ighv8-13A0A075B5Y0 101 aa11.96□□□□□ -0.5
Shroom3-201ENSMUST00000113051 RetnlbQ99P86 105 aa11.95□□□□□ -0.5
Shroom3-201ENSMUST00000113051 4930556J24RikQ9D4U7 146 aa11.95□□□□□ -0.5
Shroom3-201ENSMUST00000113051 CtrlQ9ER05 264 aa11.95□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Myo9aQ8C170 2542 aa11.95□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Cd27P41272 250 aa11.94□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Sox16Q62247 57 aa11.93□□□□□ -0.5
Shroom3-201ENSMUST00000113051 SrarpQ3ULG3 163 aa11.92□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Serp2Q6TAW2 65 aa11.92□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Smim1P0C8K7 78 aa11.92□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Gm6899Q3USS0 134 aa11.92□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Zfyve26Q5DU37 2529 aa11.92□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Gm17509Q9CZ61 145 aa11.91□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Pla2g2eQ9QUL3 142 aa11.91□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Gm5142Q8C5X9 133 aa11.91□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Gm10642Q3TWM1 71 aa11.9□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Defb11Q8R2I7 77 aa11.9□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Gm5464Q3UY29 175 aa11.9□□□□□ -0.5
Shroom3-201ENSMUST00000113051 Ighv2-9-1A0A075B697 116 aa11.87□□□□□ -0.51
Shroom3-201ENSMUST00000113051 Gm10322F7D7I4 111 aa11.87□□□□□ -0.51
Shroom3-201ENSMUST00000113051 Abca2P41234 2434 aa11.87□□□□□ -0.51
Shroom3-201ENSMUST00000113051 Prr9Q8BV84 116 aa11.87□□□□□ -0.51
Shroom3-201ENSMUST00000113051 Gm28539A0A087WSL9 92 aa11.86□□□□□ -0.51
Shroom3-201ENSMUST00000113051 BC067074F6RXI4 2391 aa11.86□□□□□ -0.51
Shroom3-201ENSMUST00000113051 Gm10577Q3UDV9 132 aa11.85□□□□□ -0.51
Shroom3-201ENSMUST00000113051 Rif1Q6PR54 2419 aaKnown RBP11.84□□□□□ -0.51
Shroom3-201ENSMUST00000113051 Tmem213Q08EA8 116 aa11.84□□□□□ -0.51
Shroom3-201ENSMUST00000113051 4930519P11RikQ9CUJ8 166 aa11.83□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Defb37Q7TMD2 62 aa11.83□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Gm28230A0A0A0MQ91 144 aa11.83□□□□□ -0.52
Shroom3-201ENSMUST00000113051 A730009L09RikA0A1B0GS82 72 aa11.83□□□□□ -0.52
Shroom3-201ENSMUST00000113051 4930432M17RikQ3V0W9 174 aa11.82□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Gm5153P01627 120 aa11.82□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Q9DAA7 145 aa11.81□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Sprr2jO70561 109 aa11.81□□□□□ -0.52
Shroom3-201ENSMUST00000113051 CenpwQ3URR0 86 aa11.81□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Hivep2Q3UHF7 2430 aa11.8□□□□□ -0.52
Shroom3-201ENSMUST00000113051 A830031A19RikQ8BNT5 113 aa11.8□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Zfand2aQ9JII7 171 aa11.79□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Gm10570F6VB42 170 aa11.79□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Ntn5Q3UQ22 452 aa11.78□□□□□ -0.52
Shroom3-201ENSMUST00000113051 4930524J08RikQ9CUJ5 163 aa11.78□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Ypel4Q65Z93 127 aa11.78□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Cd164Q9R0L9 197 aa11.78□□□□□ -0.52
Shroom3-201ENSMUST00000113051 Reg3aO09037 175 aa11.77□□□□□ -0.53
Shroom3-201ENSMUST00000113051 PtprbB2RU80 1998 aa11.76□□□□□ -0.53
Shroom3-201ENSMUST00000113051 Odf3l2Q3TZ65 277 aa11.75□□□□□ -0.53
Shroom3-201ENSMUST00000113051 Krtap27-1E9PX37 202 aa11.75□□□□□ -0.53
Shroom3-201ENSMUST00000113051 Gm17606F6ZL36 78 aa11.75□□□□□ -0.53
Shroom3-201ENSMUST00000113051 Nav2E9Q842 2432 aa11.75□□□□□ -0.53
Shroom3-201ENSMUST00000113051 1810062G17RikG3X8Y2 129 aa11.74□□□□□ -0.53
Shroom3-201ENSMUST00000113051 Lrp4Q8VI56 1905 aa11.74□□□□□ -0.53
Shroom3-201ENSMUST00000113051 1700018G05RikA0A1B0GSI2 66 aa11.73□□□□□ -0.53
Shroom3-201ENSMUST00000113051 Col4a2P08122 1707 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms