RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Tmem254aP0DN89 123 aa7.81□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Tmem254bP0DN90 123 aa7.81□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Tmem254cP0DN91 123 aa7.81□□□□□ -1.16
Rnf40-201ENSMUST00000033088 AI854703Q8BIN3 203 aa7.81□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Lmo4P61969 165 aa7.8□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Gm5464Q3UY29 175 aa7.8□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Ovol3D3YYM0 189 aa7.8□□□□□ -1.16
Rnf40-201ENSMUST00000033088 ColqO35348 457 aa7.8□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Fam19a1Q7TPG8 133 aa7.8□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Ighv1-85A0A075B5Y6 117 aa7.8□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Defb45Q3V490 66 aa7.8□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Shisa2Q8QZV2 295 aa7.8□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Ighv5-9-1A0A0A6YVS4 126 aa7.79□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Vpreb1P13372 142 aa7.79□□□□□ -1.16
Rnf40-201ENSMUST00000033088 AtrQ9JKK8 2635 aa7.78□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Tex15F8VPN2 2785 aa7.78□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Ighv1-75A0A075B5Y2 117 aa7.78□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Igkv3-2A0A075B5P0 119 aa7.78□□□□□ -1.16
Rnf40-201ENSMUST00000033088 P01745 121 aa7.78□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Tmem213Q08EA8 116 aa7.78□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Eif4ebp3Q80VV3 101 aa7.78□□□□□ -1.16
Rnf40-201ENSMUST00000033088 Klk9Q32M27 251 aa7.77□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Fam110dQ80X91 271 aa7.77□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Klk11Q9QYN3 276 aa7.77□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Chd9Q8BYH8 2885 aa7.77□□□□□ -1.17
Rnf40-201ENSMUST00000033088 B230217C12RikE9Q3Z1 139 aa7.77□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Prr15lQ8JZM2 100 aa7.77□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Tcte2E9PY37 120 aa7.77□□□□□ -1.17
Rnf40-201ENSMUST00000033088 PlaurP35456 327 aa7.76□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Esm1Q9QYY7 184 aa7.76□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Svep1A2AVA0 3567 aa7.76□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Gm10322F7D7I4 111 aa7.76□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Pip4p1Q3TWL2 284 aa7.76□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Gm9195A0A140LHT4 2805 aa7.75□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Ormdl1Q921I0 153 aa7.75□□□□□ -1.17
Rnf40-201ENSMUST00000033088 PrcdQ00LT2 53 aa7.75□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Ighv12-3A0A075B5T1 117 aa7.75□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Sprr3O09116 238 aa7.75□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Spata25Q9DA57 226 aa7.75□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Chd6A3KFM7 2711 aa7.74□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Serp2Q6TAW2 65 aa7.74□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Defb40Q70KL2 73 aa7.74□□□□□ -1.17
Rnf40-201ENSMUST00000033088 4930524J08RikQ9CUJ5 163 aa7.74□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Celsr2Q9R0M0 2920 aa7.74□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Tmem223Q9CQE2 199 aaKnown RBP7.74□□□□□ -1.17
Rnf40-201ENSMUST00000033088 NipblQ6KCD5 2798 aaKnown RBP7.74□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Fam19a5Q91WE9 132 aa7.73□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Higd2aQ9CQJ1 106 aa7.73□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Tfpi2O35536 230 aa7.73□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Sslp1Q3UN54 99 aa7.73□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Gm9747Q810H1 104 aa7.73□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Defb38Q7TNV7 63 aa7.73□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Igkv3-9A0A140T8P4 119 aa7.72□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Gm10735Q3US96 136 aa7.72□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Ighv3-3A0A0A6YWL2 116 aa7.72□□□□□ -1.17
Rnf40-201ENSMUST00000033088 CnfnQ6PCW6 111 aa7.72□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Csdc2Q91YQ3 154 aa7.72□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Muc2Q80Z19 2680 aa7.72□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Inafm2A0A1L1STD6 152 aa7.72□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Gm9913Q8BQQ2 135 aa7.72□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Eif4ebp1Q60876 117 aa7.71□□□□□ -1.17
Rnf40-201ENSMUST00000033088 Pla2g2dQ9WVF6 144 aa7.71□□□□□ -1.18
Rnf40-201ENSMUST00000033088 FlnaQ8BTM8 2647 aaKnown RBP7.7□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Igkv1-117A0A140T8M0 119 aa7.7□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Q99M08 65 aa7.7□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Sostdc1Q9CQN4 206 aa7.7□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Cox17P56394 63 aa7.7□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Fxyd5P97808 178 aa7.7□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Gm9922Q8C3P1 144 aa7.7□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Tm2d2Q8R0I4 213 aa7.7□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Znf575Q3TXZ1 239 aa7.69□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Trav9n-4A0A075B631 113 aa7.69□□□□□ -1.18
Rnf40-201ENSMUST00000033088 FlncQ8VHX6 2726 aaKnown RBP7.68□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Trav14-1A0A0G2JF94 121 aa7.68□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Ighv2-6-8A0A0A6YWY9 116 aa7.68□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Trav4-3A0A0B4J1K1 110 aa7.68□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Mast4Q811L6 2618 aa7.68□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Gm26661M0QWV4 156 aa7.68□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Timm17bQ9Z0V7 172 aa7.67□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Ufsp1Q9CZP0 217 aa7.67□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Muc4Q8JZM8 3443 aa7.67□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Cox6b1P56391 86 aaKnown RBP7.67□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Tmem258P61166 79 aa7.67□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Itpr3P70227 2670 aa7.66□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Fhl2O70433 279 aa7.66□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Utp20Q5XG71 2788 aaKnown RBP7.66□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Pla2g2aP31482 146 aa7.66□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Acyp1P56376 99 aa7.66□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Defb37Q7TMD2 62 aa7.65□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Gm5142Q8C5X9 133 aa7.65□□□□□ -1.18
Rnf40-201ENSMUST00000033088 Gm5153P01627 120 aa7.65□□□□□ -1.19
Rnf40-201ENSMUST00000033088 Gm9887F6RFI0 207 aa7.64□□□□□ -1.19
Rnf40-201ENSMUST00000033088 SbsponQ3UPR9 264 aa7.64□□□□□ -1.19
Rnf40-201ENSMUST00000033088 Fam19a3Q7TPG6 132 aa7.64□□□□□ -1.19
Rnf40-201ENSMUST00000033088 BC025920Q3US60 128 aa7.64□□□□□ -1.19
Rnf40-201ENSMUST00000033088 Gm37988J3QM41 62 aa7.64□□□□□ -1.19
Rnf40-201ENSMUST00000033088 Gm11011D3Z3L9 86 aa7.63□□□□□ -1.19
Rnf40-201ENSMUST00000033088 Gm3250E9Q1M3 230 aa7.63□□□□□ -1.19
Rnf40-201ENSMUST00000033088 Vpreb2P13373 142 aa7.63□□□□□ -1.19
Rnf40-201ENSMUST00000033088 Cd164l2Q9D6W7 172 aa7.63□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms