RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Igkv3-10A0A0G2JGN0 119 aa7.34□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Ifitm6A0A1B0GS75 124 aa7.33□□□□□ -1.24
Ubr1-201ENSMUST00000028728 4930518I15RikQ3V2W7 57 aa7.33□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Dkk4Q8VEJ3 221 aa7.33□□□□□ -1.24
Ubr1-201ENSMUST00000028728 SnurfQ9WU12 71 aa7.33□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Ighv2-5A0A0A6YY69 116 aa7.33□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Defb42Q8BVB5 75 aa7.33□□□□□ -1.24
Ubr1-201ENSMUST00000028728 PlaurP35456 327 aa7.33□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Obox2E9PXV9 151 aa7.33□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Gm9913Q8BQQ2 135 aa7.32□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Krtap16-1A2A5X5 502 aa7.32□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Flg2Q2VIS4 2362 aa7.32□□□□□ -1.24
Ubr1-201ENSMUST00000028728 TectaO08523 2155 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Igkv1-117A0A140T8M0 119 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 PrlhG3UWC3 86 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Defb13Q8R2I4 64 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Esm1Q9QYY7 184 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Wisp2Q9Z0G4 251 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 DscamQ9ERC8 2013 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Igkv1-110A0A0B4J1I0 119 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 H2al1mQ9DAD9 105 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Lrp4Q8VI56 1905 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 P06329 120 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Znf580Q9DB38 172 aa7.31□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Gm5153P01627 120 aa7.3□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Gm8439G3UWA7 96 aa7.3□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Spint4Q9D263 159 aa7.3□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Zfand2aQ9JII7 171 aa7.3□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Gm9573F7C950 1606 aa7.3□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Coa6Q8BGD8 79 aa7.3□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Wfdc10Q3V2J9 124 aa7.3□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Cd164Q9R0L9 197 aa7.3□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Spg11Q3UHA3 2430 aa7.29□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Gm10570F6VB42 170 aa7.29□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Ighv2-9A0A075B5Q5 116 aa7.29□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Wfdc12Q9JHY3 85 aa7.29□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Ccdc179J3QM76 67 aa7.29□□□□□ -1.24
Ubr1-201ENSMUST00000028728 ScxQ64124 207 aa7.28□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Igkv3-4A0A140T8Q4 119 aa7.28□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Znf575Q3TXZ1 239 aa7.28□□□□□ -1.24
Ubr1-201ENSMUST00000028728 NbasE9Q411 2356 aa7.28□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Pla2g2cP48076 150 aa7.28□□□□□ -1.24
Ubr1-201ENSMUST00000028728 Ighv2-2A0A075B5P8 116 aa7.27□□□□□ -1.25
Ubr1-201ENSMUST00000028728 P01821 116 aa7.27□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Ly6c2P0CW03 131 aa7.27□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Prr13Q9CQJ5 137 aa7.27□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Defb40Q70KL2 73 aa7.27□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Gm5464Q3UY29 175 aa7.26□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Ankhd1E9PUR0 2548 aaKnown RBP7.26□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Gm9925F6T2U3 160 aa7.25□□□□□ -1.25
Ubr1-201ENSMUST00000028728 A930009A15RikG3UYI6 118 aa7.25□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Igkv3-3A0A140T8Q0 119 aa7.25□□□□□ -1.25
Ubr1-201ENSMUST00000028728 E130114P18RikF6S0S7 154 aa7.25□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Pla2g1bQ9Z0Y2 146 aa7.24□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Zfyve26Q5DU37 2529 aa7.24□□□□□ -1.25
Ubr1-201ENSMUST00000028728 P01819 144 aa7.24□□□□□ -1.25
Ubr1-201ENSMUST00000028728 1700074P13RikQ9D9G7 251 aa7.24□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Kiaa1549Q68FD9 1940 aa7.23□□□□□ -1.25
Ubr1-201ENSMUST00000028728 P84750 121 aa7.23□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Prr9Q8BV84 116 aa7.23□□□□□ -1.25
Ubr1-201ENSMUST00000028728 A0A286YCN5 57 aa7.22□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Igkv8-21A0A140T8P7 120 aa7.22□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Gm17509Q9CZ61 145 aa7.22□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Gm10197F6QEY5 67 aa7.21□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Odf3l2Q3TZ65 277 aa7.21□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Gpha2Q925Q5 128 aa7.21□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Znf706Q9D115 76 aaKnown RBP7.21□□□□□ -1.25
Ubr1-201ENSMUST00000028728 Gm3443F7CCV5 94 aa7.21□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Gm43218A0A0G2JGT0 114 aa7.21□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Tln1P26039 2541 aaKnown RBP7.21□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Gm9887F6RFI0 207 aa7.21□□□□□ -1.26
Ubr1-201ENSMUST00000028728 AcacbE9Q4Z2 2448 aa7.2□□□□□ -1.26
Ubr1-201ENSMUST00000028728 A530084C06RikQ3UTW2 186 aa7.2□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Wfdc15aQ8BH89 80 aa7.19□□□□□ -1.26
Ubr1-201ENSMUST00000028728 AI854703Q8BIN3 203 aa7.18□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Gm10300Q8C8P7 189 aa7.18□□□□□ -1.26
Ubr1-201ENSMUST00000028728 BC067074F6RXI4 2391 aa7.18□□□□□ -1.26
Ubr1-201ENSMUST00000028728 C2cd3Q52KB6 2323 aa7.18□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Pcsk5Q04592 1877 aa7.17□□□□□ -1.26
Ubr1-201ENSMUST00000028728 SycnQ8VCK7 134 aa7.17□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Gm10308Q9CVR5 141 aa7.17□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Cd164l2Q9D6W7 172 aa7.17□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Sostdc1Q9CQN4 206 aa7.16□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Col5a1O88207 1838 aa7.16□□□□□ -1.26
Ubr1-201ENSMUST00000028728 7530416G11RikJ3QJX6 159 aa7.16□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Myo9aQ8C170 2542 aa7.15□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Gm10267M0QWD8 85 aa7.15□□□□□ -1.26
Ubr1-201ENSMUST00000028728 Bri3P28662 125 aa7.15□□□□□ -1.26
Ubr1-201ENSMUST00000028728 CrygeQ03740 174 aa7.15□□□□□ -1.26
Ubr1-201ENSMUST00000028728 OtoglF7A4A7 2325 aa7.15□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Q9DAA7 145 aa7.15□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Hivep3A2A884 2348 aa7.15□□□□□ -1.27
Ubr1-201ENSMUST00000028728 CrygaP04345 174 aa7.14□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Col27a1Q5QNQ9 1845 aa7.14□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Ighv8-13A0A075B5Y0 101 aa7.14□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Gm9903Q8C9Y8 129 aa7.13□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Piezo2Q8CD54 2822 aa7.13□□□□□ -1.27
Ubr1-201ENSMUST00000028728 CrygfQ9CXV3 174 aa7.13□□□□□ -1.27
Ubr1-201ENSMUST00000028728 C130032M10RikQ8C888 123 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 MobpQ9D2P8 170 aa7.12□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 99.2 ms