RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 1700011M02RikB1AX35 88 aa9.9□□□□□ -0.82
Notch1-201ENSMUST00000028288 Obox2E9PXV9 151 aa9.9□□□□□ -0.82
Notch1-201ENSMUST00000028288 Tcl1b5P56845 121 aa9.9□□□□□ -0.82
Notch1-201ENSMUST00000028288 CnfnQ6PCW6 111 aa9.9□□□□□ -0.82
Notch1-201ENSMUST00000028288 5730596B20RikQ8BQ08 205 aa9.9□□□□□ -0.83
Notch1-201ENSMUST00000028288 Gm10322F7D7I4 111 aa9.9□□□□□ -0.83
Notch1-201ENSMUST00000028288 Col4a2P08122 1707 aa9.9□□□□□ -0.83
Notch1-201ENSMUST00000028288 SrarpQ3ULG3 163 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 Dmbt1Q60997 2085 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 PcntP48725 2898 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 Chchd7Q8K2Q5 85 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 Gm10509O88255 85 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 Ndufb1P0DN34 57 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 PlaurP35456 327 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 Cd27P41272 250 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 A0A286YCN5 57 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 Bahcc1Q3UHR0 2643 aa9.89□□□□□ -0.83
Notch1-201ENSMUST00000028288 Polr2kQ63871 58 aa9.88□□□□□ -0.83
Notch1-201ENSMUST00000028288 ColqO35348 457 aa9.88□□□□□ -0.83
Notch1-201ENSMUST00000028288 Myo18bE9PV66 2605 aa9.88□□□□□ -0.83
Notch1-201ENSMUST00000028288 1700056E22RikF7CNM6 234 aa9.87□□□□□ -0.83
Notch1-201ENSMUST00000028288 Gpha2Q925Q5 128 aa9.87□□□□□ -0.83
Notch1-201ENSMUST00000028288 LhbO09108 141 aa9.87□□□□□ -0.83
Notch1-201ENSMUST00000028288 Igkv3-12A0A140T8P0 119 aa9.87□□□□□ -0.83
Notch1-201ENSMUST00000028288 Wfdc10Q3V2J9 124 aa9.87□□□□□ -0.83
Notch1-201ENSMUST00000028288 SbsponQ3UPR9 264 aa9.86□□□□□ -0.83
Notch1-201ENSMUST00000028288 Epg5Q80TA9 2572 aa9.85□□□□□ -0.83
Notch1-201ENSMUST00000028288 Gm20604F8WIA3 75 aa9.85□□□□□ -0.83
Notch1-201ENSMUST00000028288 Cyyr1Q8VIH7 165 aa9.85□□□□□ -0.83
Notch1-201ENSMUST00000028288 Wfdc13Q5DQQ6 81 aa9.85□□□□□ -0.83
Notch1-201ENSMUST00000028288 Trav14-1A0A0G2JF94 121 aa9.85□□□□□ -0.83
Notch1-201ENSMUST00000028288 Pla2g2eQ9QUL3 142 aa9.85□□□□□ -0.83
Notch1-201ENSMUST00000028288 Defb42Q8BVB5 75 aa9.84□□□□□ -0.83
Notch1-201ENSMUST00000028288 Gm6899Q3USS0 134 aa9.84□□□□□ -0.83
Notch1-201ENSMUST00000028288 Q8K1L6 76 aa9.84□□□□□ -0.83
Notch1-201ENSMUST00000028288 Gm11011D3Z3L9 86 aa9.84□□□□□ -0.83
Notch1-201ENSMUST00000028288 Gm8439G3UWA7 96 aa9.83□□□□□ -0.84
Notch1-201ENSMUST00000028288 Ube2d3P61079 147 aa9.83□□□□□ -0.84
Notch1-201ENSMUST00000028288 Ube2d2P62838 147 aa9.83□□□□□ -0.84
Notch1-201ENSMUST00000028288 Igkv8-30A0A140T8M3 121 aa9.83□□□□□ -0.84
Notch1-201ENSMUST00000028288 Abca12E9Q876 2595 aa9.83□□□□□ -0.84
Notch1-201ENSMUST00000028288 A0A286YE49 62 aa9.82□□□□□ -0.84
Notch1-201ENSMUST00000028288 SycnQ8VCK7 134 aa9.82□□□□□ -0.84
Notch1-201ENSMUST00000028288 CdsnQ7TPC1 561 aa9.81□□□□□ -0.84
Notch1-201ENSMUST00000028288 Cdc42se2Q8BGH7 84 aa9.81□□□□□ -0.84
Notch1-201ENSMUST00000028288 Nbeal1E9PYP2 2688 aa9.81□□□□□ -0.84
Notch1-201ENSMUST00000028288 Nupr2Q497P3 102 aa9.81□□□□□ -0.84
Notch1-201ENSMUST00000028288 1700074P13RikQ9D9G7 251 aa9.81□□□□□ -0.84
Notch1-201ENSMUST00000028288 Ovol3D3YYM0 189 aa9.8□□□□□ -0.84
Notch1-201ENSMUST00000028288 B430305J03RikQ8BQQ8 176 aa9.8□□□□□ -0.84
Notch1-201ENSMUST00000028288 Prrc2cQ3TLH4 2846 aaKnown RBP9.8□□□□□ -0.84
Notch1-201ENSMUST00000028288 Gm10337F7DEP7 55 aa9.79□□□□□ -0.84
Notch1-201ENSMUST00000028288 CrygfQ9CXV3 174 aa9.79□□□□□ -0.84
Notch1-201ENSMUST00000028288 B230217C12RikE9Q3Z1 139 aa9.79□□□□□ -0.84
Notch1-201ENSMUST00000028288 P06329 120 aa9.79□□□□□ -0.84
Notch1-201ENSMUST00000028288 TeppQ6IMH0 216 aa9.79□□□□□ -0.84
Notch1-201ENSMUST00000028288 P84750 121 aa9.78□□□□□ -0.84
Notch1-201ENSMUST00000028288 Znf575Q3TXZ1 239 aa9.78□□□□□ -0.84
Notch1-201ENSMUST00000028288 Gm4707V9GXN5 68 aa9.78□□□□□ -0.84
Notch1-201ENSMUST00000028288 Gm19935A0A1B0GSF9 52 aa9.78□□□□□ -0.84
Notch1-201ENSMUST00000028288 Psmb11Q8BG41 302 aa9.78□□□□□ -0.84
Notch1-201ENSMUST00000028288 4930524J08RikQ9CUJ5 163 aa9.78□□□□□ -0.84
Notch1-201ENSMUST00000028288 Znf706Q9D115 76 aaKnown RBP9.78□□□□□ -0.84
Notch1-201ENSMUST00000028288 2310009B15RikA0A0A6YWI4 143 aa9.78□□□□□ -0.84
Notch1-201ENSMUST00000028288 A830031A19RikQ8BNT5 113 aa9.77□□□□□ -0.85
Notch1-201ENSMUST00000028288 Pla2g2cP48076 150 aa9.77□□□□□ -0.85
Notch1-201ENSMUST00000028288 Krtap27-1E9PX37 202 aa9.76□□□□□ -0.85
Notch1-201ENSMUST00000028288 4930432M17RikQ3V0W9 174 aa9.76□□□□□ -0.85
Notch1-201ENSMUST00000028288 Ighv2-9-1A0A075B697 116 aa9.76□□□□□ -0.85
Notch1-201ENSMUST00000028288 Zfp292Q9Z2U2 2698 aa9.75□□□□□ -0.85
Notch1-201ENSMUST00000028288 Trbv13-2A0A140T8N6 113 aa9.75□□□□□ -0.85
Notch1-201ENSMUST00000028288 Gm9922Q8C3P1 144 aa9.75□□□□□ -0.85
Notch1-201ENSMUST00000028288 Usp9yF8VPU6 2556 aa9.75□□□□□ -0.85
Notch1-201ENSMUST00000028288 Golgb1E9PVZ8 3238 aa9.75□□□□□ -0.85
Notch1-201ENSMUST00000028288 4930556J24RikQ9D4U7 146 aa9.74□□□□□ -0.85
Notch1-201ENSMUST00000028288 Igkv3-7A0A0G2JE31 119 aa9.73□□□□□ -0.85
Notch1-201ENSMUST00000028288 Smrp1Q2MH31 260 aa9.73□□□□□ -0.85
Notch1-201ENSMUST00000028288 Gm26566Q8CAC1 153 aa9.73□□□□□ -0.85
Notch1-201ENSMUST00000028288 Serp1Q9Z1W5 66 aa9.73□□□□□ -0.85
Notch1-201ENSMUST00000028288 A930009A15RikG3UYI6 118 aa9.73□□□□□ -0.85
Notch1-201ENSMUST00000028288 Gm10267M0QWD8 85 aa9.73□□□□□ -0.85
Notch1-201ENSMUST00000028288 Rpl28P41105 137 aaKnown RBP9.73□□□□□ -0.85
Notch1-201ENSMUST00000028288 Ifitm6A0A1B0GS75 124 aa9.72□□□□□ -0.85
Notch1-201ENSMUST00000028288 Gm42715A0A087WP63 3095 aaKnown RBP9.72□□□□□ -0.85
Notch1-201ENSMUST00000028288 Spink13Q3UTS8 97 aa9.72□□□□□ -0.85
Notch1-201ENSMUST00000028288 Gm5142Q8C5X9 133 aa9.72□□□□□ -0.85
Notch1-201ENSMUST00000028288 Sprr2jO70561 109 aa9.72□□□□□ -0.85
Notch1-201ENSMUST00000028288 D730001G18RikA0A087WQU7 115 aa9.71□□□□□ -0.85
Notch1-201ENSMUST00000028288 H2al1mQ9DAD9 105 aa9.71□□□□□ -0.85
Notch1-201ENSMUST00000028288 Gm10135F6TEE5 83 aa9.71□□□□□ -0.86
Notch1-201ENSMUST00000028288 Pla2g1bQ9Z0Y2 146 aa9.7□□□□□ -0.86
Notch1-201ENSMUST00000028288 Dnah12Q3V0Q1 3086 aa9.7□□□□□ -0.86
Notch1-201ENSMUST00000028288 Cep192E9Q4Y4 2514 aaKnown RBP9.7□□□□□ -0.86
Notch1-201ENSMUST00000028288 Crip2Q9DCT8 208 aaKnown RBP9.69□□□□□ -0.86
Notch1-201ENSMUST00000028288 Wfdc3Q14AE4 130 aa9.69□□□□□ -0.86
Notch1-201ENSMUST00000028288 Usp24B1AY13 2617 aaKnown RBP9.69□□□□□ -0.86
Notch1-201ENSMUST00000028288 Gm3443F7CCV5 94 aa9.69□□□□□ -0.86
Notch1-201ENSMUST00000028288 Cd164l2Q9D6W7 172 aa9.69□□□□□ -0.86
Notch1-201ENSMUST00000028288 Gm9767G3X930 207 aa9.68□□□□□ -0.86
Notch1-201ENSMUST00000028288 BC025920Q3US60 128 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 61.1 ms