RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 SvipQ3UZP4 77 aa12.89□□□□□ -0.35
Ptpre-201ENSMUST00000073961 Ovol3D3YYM0 189 aa12.88□□□□□ -0.35
Ptpre-201ENSMUST00000073961 E130114P18RikF6S0S7 154 aa12.88□□□□□ -0.35
Ptpre-201ENSMUST00000073961 Esm1Q9QYY7 184 aa12.88□□□□□ -0.35
Ptpre-201ENSMUST00000073961 Cox7bP56393 80 aa12.88□□□□□ -0.35
Ptpre-201ENSMUST00000073961 Cox8cA6H666 72 aa12.88□□□□□ -0.35
Ptpre-201ENSMUST00000073961 Igkv4-92A0A0B4J1I2 117 aa12.87□□□□□ -0.35
Ptpre-201ENSMUST00000073961 Gm10647E9Q8X0 124 aa12.87□□□□□ -0.35
Ptpre-201ENSMUST00000073961 Gm10490F6VBM2 120 aa12.87□□□□□ -0.35
Ptpre-201ENSMUST00000073961 P06320 134 aa12.87□□□□□ -0.35
Ptpre-201ENSMUST00000073961 PrlhG3UWC3 86 aa12.85□□□□□ -0.35
Ptpre-201ENSMUST00000073961 ColqO35348 457 aa12.85□□□□□ -0.35
Ptpre-201ENSMUST00000073961 P01755 137 aa12.85□□□□□ -0.35
Ptpre-201ENSMUST00000073961 PlaurP35456 327 aa12.84□□□□□ -0.35
Ptpre-201ENSMUST00000073961 CenpwQ3URR0 86 aa12.84□□□□□ -0.35
Ptpre-201ENSMUST00000073961 Gm8439G3UWA7 96 aa12.83□□□□□ -0.36
Ptpre-201ENSMUST00000073961 4930535I16RikQ9CUI2 172 aa12.83□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Gm10509O88255 85 aa12.83□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Znf575Q3TXZ1 239 aa12.83□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Dscaml1Q4VA61 2053 aa12.83□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Atox1O08997 68 aaKnown RBP12.83□□□□□ -0.36
Ptpre-201ENSMUST00000073961 TectaO08523 2155 aa12.82□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Gm21748Q3UE70 102 aa12.82□□□□□ -0.36
Ptpre-201ENSMUST00000073961 1700011M02RikB1AX35 88 aa12.82□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Gm20604F8WIA3 75 aa12.82□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Pcsk5Q04592 1877 aa12.82□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Igkv3-3A0A140T8Q0 119 aa12.81□□□□□ -0.36
Ptpre-201ENSMUST00000073961 DysfQ9ESD7 2090 aa12.81□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Ccdc179J3QM76 67 aa12.81□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Sec61gP60060 68 aa12.81□□□□□ -0.36
Ptpre-201ENSMUST00000073961 4930564D02RikQ9D4S4 103 aa12.81□□□□□ -0.36
Ptpre-201ENSMUST00000073961 5730596B20RikQ8BQ08 205 aa12.8□□□□□ -0.36
Ptpre-201ENSMUST00000073961 SrarpQ3ULG3 163 aa12.8□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Igkv1-117A0A140T8M0 119 aa12.8□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Ighv8-11A0A075B5X4 119 aa12.79□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Ube2d3P61079 147 aa12.79□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Ube2d2P62838 147 aa12.79□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Defb13Q8R2I4 64 aa12.79□□□□□ -0.36
Ptpre-201ENSMUST00000073961 FshbQ60687 130 aa12.79□□□□□ -0.36
Ptpre-201ENSMUST00000073961 SonQ9QX47 2444 aaKnown RBP12.78□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Gm12057A0A087WR21 115 aa12.78□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Cdc42se2Q8BGH7 84 aa12.78□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Fam19a5Q91WE9 132 aa12.78□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Cspg4Q8VHY0 2327 aa12.78□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Obox2E9PXV9 151 aa12.78□□□□□ -0.36
Ptpre-201ENSMUST00000073961 BaalcQ8VHV1 145 aa12.78□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Defb42Q8BVB5 75 aa12.77□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Notch3Q61982 2318 aa12.77□□□□□ -0.36
Ptpre-201ENSMUST00000073961 Igkv8-21A0A140T8P7 120 aa12.77□□□□□ -0.37
Ptpre-201ENSMUST00000073961 U90926O08546 118 aa12.77□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Tns1E9Q0S6 1888 aaKnown RBP12.77□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Pcnx2Q5DU28 2122 aa12.76□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Tcl1b5P56845 121 aa12.76□□□□□ -0.37
Ptpre-201ENSMUST00000073961 H2al1bA0A087WP11 105 aa12.76□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Igkv1-110A0A0B4J1I0 119 aa12.75□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Q8K1L6 76 aa12.74□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Krtap27-1E9PX37 202 aa12.74□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Wfdc10Q3V2J9 124 aa12.74□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Gm9922Q8C3P1 144 aa12.74□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Med13lQ6JPI3 2207 aa12.74□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Ighv10-3A0A075B5T6 119 aa12.74□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Wfdc15aQ8BH89 80 aa12.73□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Wfdc12Q9JHY3 85 aa12.73□□□□□ -0.37
Ptpre-201ENSMUST00000073961 SbsponQ3UPR9 264 aa12.73□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Tanc2A2A690 1994 aa12.72□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Ndufb1P0DN34 57 aa12.71□□□□□ -0.37
Ptpre-201ENSMUST00000073961 ScxQ64124 207 aa12.71□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Ep300B2RWS6 2412 aa12.71□□□□□ -0.37
Ptpre-201ENSMUST00000073961 Ighv2-9-1A0A075B697 116 aa12.7□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Cd27P41272 250 aa12.7□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Gm26566Q8CAC1 153 aa12.7□□□□□ -0.38
Ptpre-201ENSMUST00000073961 A0A286YCN5 57 aa12.7□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Col4a4Q9QZR9 1682 aa12.69□□□□□ -0.38
Ptpre-201ENSMUST00000073961 B230217C12RikE9Q3Z1 139 aa12.69□□□□□ -0.38
Ptpre-201ENSMUST00000073961 H2al1aQ5M8Q2 105 aa12.69□□□□□ -0.38
Ptpre-201ENSMUST00000073961 H2al1eQ810S6 105 aa12.69□□□□□ -0.38
Ptpre-201ENSMUST00000073961 A830031A19RikQ8BNT5 113 aa12.69□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Rpl28P41105 137 aaKnown RBP12.69□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Prrc2aQ7TSC1 2158 aaKnown RBP12.69□□□□□ -0.38
Ptpre-201ENSMUST00000073961 4930556J24RikQ9D4U7 146 aa12.68□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Defb40Q70KL2 73 aa12.68□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Ndufs5Q99LY9 106 aa12.68□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Q9DAB9 146 aa12.68□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Gm19935A0A1B0GSF9 52 aa12.68□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Dopey1Q8BL99 2399 aa12.67□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Wnk1P83741 2377 aa12.67□□□□□ -0.38
Ptpre-201ENSMUST00000073961 NpwA0A1L1STR8 176 aa12.67□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Smrp1Q2MH31 260 aa12.67□□□□□ -0.38
Ptpre-201ENSMUST00000073961 4930524J08RikQ9CUJ5 163 aa12.67□□□□□ -0.38
Ptpre-201ENSMUST00000073961 DscamQ9ERC8 2013 aa12.67□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Gm11011D3Z3L9 86 aa12.67□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Gpha2Q925Q5 128 aa12.67□□□□□ -0.38
Ptpre-201ENSMUST00000073961 A930009A15RikG3UYI6 118 aa12.66□□□□□ -0.38
Ptpre-201ENSMUST00000073961 PscaP57096 123 aa12.66□□□□□ -0.38
Ptpre-201ENSMUST00000073961 A0A286YE49 62 aa12.65□□□□□ -0.38
Ptpre-201ENSMUST00000073961 Cyyr1Q8VIH7 165 aa12.65□□□□□ -0.38
Ptpre-201ENSMUST00000073961 SycnQ8VCK7 134 aa12.64□□□□□ -0.39
Ptpre-201ENSMUST00000073961 CrygfQ9CXV3 174 aa12.64□□□□□ -0.39
Ptpre-201ENSMUST00000073961 Trbv13-2A0A140T8N6 113 aa12.64□□□□□ -0.39
Ptpre-201ENSMUST00000073961 Gm9573F7C950 1606 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms