RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 SbsponQ3UPR9 264 aa7.53□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 9430015G10RikA2ASP7 199 aa7.53□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Q9DAQ5 155 aa7.53□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Klk12B2RVZ0 247 aa7.52□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Rbm3O89086 153 aaKnown RBP7.52□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 FshbQ60687 130 aa7.52□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Smr3aQ61900 147 aa7.52□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Psmb11Q8BG41 302 aa7.52□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Gm5464Q3UY29 175 aa7.52□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Cyyr1Q8VIH7 165 aa7.52□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Ly6hQ9WUC3 139 aa7.52□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Nav2E9Q842 2432 aa7.51□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Igkv1-88A0A140T8N1 120 aa7.51□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Igkv2-109A0A075B5K6 120 aa7.51□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Igkv8-26A0A075B5N5 123 aa7.51□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 4930546C10RikE9Q4Y3 121 aa7.51□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Rtl10D3YWW5 146 aa7.51□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Gm10251J3QPM5 127 aa7.51□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Gm2916Q9D9B9 127 aa7.51□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Gm3443F7CCV5 94 aa7.5□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Tcl1b5P56845 121 aa7.5□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Cdc42se2Q8BGH7 84 aa7.5□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Ufsp1Q9CZP0 217 aa7.5□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Ighv10-1A0A0B4J1J6 119 aa7.5□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Igkv8-18A0A0B4J1J3 123 aa7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Lrrk2Q5S006 2527 aa7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 B230217C12RikE9Q3Z1 139 aa7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Ndufc1Q9CQY9 76 aa7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Mrpl55Q9CZ83 127 aa7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Ube2d4D3YUH6 135 aa7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Rpl18aP62717 176 aaKnown RBP7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Defb2P82020 71 aa7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Gm37389A0A0A6YW05 95 aa7.49□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Bri3P28662 125 aa7.48□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Ighv1-72P01751 139 aa7.48□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Cox8cA6H666 72 aa7.48□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Gm9767G3X930 207 aa7.47□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Gm10647E9Q8X0 124 aa7.47□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 SrarpQ3ULG3 163 aa7.47□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 AcanQ61282 2132 aaKnown RBP7.47□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Ighv2-9-1A0A075B697 116 aa7.47□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 CrygfQ9CXV3 174 aa7.47□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Tmem258P61166 79 aa7.47□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 BC025920Q3US60 128 aa7.47□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Tfpi2O35536 230 aa7.46□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 1700012A03RikQ9DAF1 130 aa7.46□□□□□ -1.21
Ccdc40-201ENSMUST00000035935 Shisa2Q8QZV2 295 aa7.46□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Fgf23Q9EPC2 251 aa7.46□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Alms1Q8K4E0 3251 aa7.46□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Igf1P05017 153 aa7.45□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Gm1968Q3T9I3 115 aa7.45□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Sorl1O88307 2215 aaKnown RBP7.45□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Spink4O35679 86 aa7.45□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Gm20726G3UX18 150 aa7.45□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Igkv4-58A0A0G2JGI6 119 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 1700011M02RikB1AX35 88 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Gm9805F6YK59 57 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Ptpn13Q64512 2453 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Golgb1E9PVZ8 3238 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 CrygdP04342 174 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Smrp1Q2MH31 260 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Srsf12Q8C8K3 266 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Cd164l2Q9D6W7 172 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Esm1Q9QYY7 184 aa7.44□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Gm21748Q3UE70 102 aa7.43□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Igkv3-5A0A140T8M6 119 aa7.43□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Gm10401E9Q3K6 71 aa7.43□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 P01755 137 aa7.43□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Plac8l1Q08EJ0 177 aa7.43□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Wdr38Q9D994 303 aa7.43□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Ube2aQ9Z255 152 aa7.43□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Pla2g1bQ9Z0Y2 146 aa7.42□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Prrc2aQ7TSC1 2158 aaKnown RBP7.42□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 P06329 120 aa7.41□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 2010109I03RikQ9CQ11 111 aa7.41□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 CrygeQ03740 174 aa7.41□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Fam19a1Q7TPG8 133 aa7.41□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 4930556J24RikQ9D4U7 146 aa7.4□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Brwd1Q921C3 2304 aa7.4□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Dscaml1Q4VA61 2053 aa7.4□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Piezo2Q8CD54 2822 aa7.4□□□□□ -1.22
Ccdc40-201ENSMUST00000035935 Rpl28P41105 137 aaKnown RBP7.4□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Trbv13-2A0A140T8N6 113 aa7.39□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Cox7bP56393 80 aa7.39□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Spink8Q09TK9 105 aa7.39□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Gm28539A0A087WSL9 92 aa7.39□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Gm3618D3Z4P5 127 aa7.38□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 5730596B20RikQ8BQ08 205 aa7.38□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Krtap26-1Q9D7N2 215 aa7.38□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Myo9aQ8C170 2542 aa7.38□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Klk9Q32M27 251 aa7.38□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 A830005F24RikQ8BRT5 167 aa7.38□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Gm4707V9GXN5 68 aa7.38□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 BikO70337 150 aa7.37□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Gm10549Q3URY4 149 aa7.37□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 4930432M17RikQ3V0W9 174 aa7.37□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 SetxA2AKX3 2646 aa7.37□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Gm17521F6QAC8 156 aa7.37□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Gm20604F8WIA3 75 aa7.37□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Q8K1L6 76 aa7.37□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 74.4 ms