RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Gm16223Q8CBM3 117 aa12.27□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Timm17bQ9Z0V7 172 aa12.27□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Gm8439G3UWA7 96 aa12.27□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 BikO70337 150 aa12.27□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Tcl1b3P56842 122 aa12.27□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Polr2kQ63871 58 aa12.27□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 2010109I03RikQ9CQ11 111 aa12.27□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Ighv8-12A0A0G2JDE1 119 aa12.26□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 FshbQ60687 130 aa12.26□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Defb12Q8K4N3 78 aa12.26□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Brk1Q91VR8 75 aa12.26□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 9430015G10RikA2ASP7 199 aa12.25□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Ly6hQ9WUC3 139 aa12.25□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Chchd7Q8K2Q5 85 aa12.25□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Ighv1-59A0A0A6YXE0 117 aa12.25□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 SbsponQ3UPR9 264 aa12.25□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Ighv1-62-1A0A075B5U3 116 aa12.25□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 B430305J03RikQ8BQQ8 176 aa12.25□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Naa38Q9D2U5 125 aa12.25□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Fam19a1Q7TPG8 133 aa12.24□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 U90926O08546 118 aa12.23□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Tmem213Q08EA8 116 aa12.23□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 P01823 113 aa12.23□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Rbx1P62878 108 aa12.23□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 PtprqP0C5E4 2300 aa12.23□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Ighv1-72P01751 139 aa12.23□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Gm10490F6VBM2 120 aa12.22□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Cfc1P97766 202 aa12.22□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 CnfnQ6PCW6 111 aa12.22□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Ube2d4D3YUH6 135 aa12.22□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Vpreb3D3Z6J4 130 aa12.22□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Gm17521F6QAC8 156 aa12.22□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 Fgf23Q9EPC2 251 aa12.21□□□□□ -0.45
Ubfd1-201ENSMUST00000033158 TrrapQ80YV3 2565 aaKnown RBP12.2□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Esm1Q9QYY7 184 aa12.2□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Pla2g2eQ9QUL3 142 aa12.19□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Arhgap32Q811P8 2089 aa12.19□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 9530003J23RikQ8BM26 151 aa12.18□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Setd2E9Q5F9 2537 aa12.18□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Ighv8-5A0A0A6YY60 119 aa12.18□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 BtcQ05928 177 aa12.18□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Smim20D3Z7Q2 69 aa12.17□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Pcsk5Q04592 1877 aa12.17□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Gm10322F7D7I4 111 aa12.17□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 SetxA2AKX3 2646 aa12.17□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Gm9805F6YK59 57 aa12.17□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Gm26566Q8CAC1 153 aa12.16□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Smim1P0C8K7 78 aa12.16□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 4930564D02RikQ9D4S4 103 aa12.16□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Ighv10-1A0A0B4J1J6 119 aa12.16□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Defb42Q8BVB5 75 aa12.16□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Gm9922Q8C3P1 144 aa12.16□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 PolqQ8CGS6 2544 aa12.15□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Spink4O35679 86 aa12.15□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Ndufc1Q9CQY9 76 aa12.15□□□□□ -0.46
Ubfd1-201ENSMUST00000033158 Gm9767G3X930 207 aa12.14□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Klk9Q32M27 251 aa12.14□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Gm10509O88255 85 aa12.14□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 CrygfQ9CXV3 174 aa12.13□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 TroQ6DIC6 2087 aa12.13□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Vpreb2P13373 142 aa12.13□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 PscaP57096 123 aa12.13□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Ube2d1P61080 147 aaKnown RBP12.13□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Wdr38Q9D994 303 aa12.13□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Tns1E9Q0S6 1888 aaKnown RBP12.13□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Plac8l1Q08EJ0 177 aa12.13□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Defb2P82020 71 aa12.12□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 P01755 137 aa12.12□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Gm10577Q3UDV9 132 aa12.11□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 A830005F24RikQ8BRT5 167 aa12.11□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Prr15lQ8JZM2 100 aa12.11□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 A0A286YCN5 57 aa12.11□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Cox8cA6H666 72 aa12.11□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Ube2d3P61079 147 aa12.11□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Ube2d2P62838 147 aa12.11□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Col4a4Q9QZR9 1682 aa12.1□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 P06320 134 aa12.1□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Gm1968Q3T9I3 115 aa12.1□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Obox2E9PXV9 151 aa12.09□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Igkv3-4A0A140T8Q4 119 aa12.09□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Cdc42se2Q8BGH7 84 aa12.09□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 EnhoQ8K1D8 76 aa12.09□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Cyyr1Q8VIH7 165 aa12.09□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Wfdc15aQ8BH89 80 aa12.09□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Cd27P41272 250 aa12.09□□□□□ -0.47
Ubfd1-201ENSMUST00000033158 Fam19a5Q91WE9 132 aa12.08□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 A930009A15RikG3UYI6 118 aa12.08□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Wfdc12Q9JHY3 85 aa12.08□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Zfp462B1AWL2 2495 aaKnown RBP12.07□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Smrp1Q2MH31 260 aa12.07□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Gm21748Q3UE70 102 aa12.07□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Pla2g1bQ9Z0Y2 146 aa12.07□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Igkv3-3A0A140T8Q0 119 aa12.07□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 1700011M02RikB1AX35 88 aa12.07□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Cox7bP56393 80 aa12.07□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Gm4707V9GXN5 68 aa12.07□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Ccdc179J3QM76 67 aa12.06□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Wfdc10Q3V2J9 124 aa12.06□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Mrpl52Q9D0Y8 121 aa12.06□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 B230217C12RikE9Q3Z1 139 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms