RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Gm17732E9Q5I2 61 aa8.26□□□□□ -1.09
Trim55-201ENSMUST00000029139 Lce6aD3YV94 81 aa8.26□□□□□ -1.09
Trim55-201ENSMUST00000029139 Zfp36P22893 319 aaKnown RBP8.26□□□□□ -1.09
Trim55-201ENSMUST00000029139 Pla2g2aP31482 146 aa8.26□□□□□ -1.09
Trim55-201ENSMUST00000029139 Ccl6P27784 116 aa8.25□□□□□ -1.09
Trim55-201ENSMUST00000029139 Defb29Q8BGW9 78 aa8.25□□□□□ -1.09
Trim55-201ENSMUST00000029139 Ighv3-8A0A075B5T0 131 aa8.25□□□□□ -1.09
Trim55-201ENSMUST00000029139 Igkv4-59A0A0B4J1I8 117 aa8.25□□□□□ -1.09
Trim55-201ENSMUST00000029139 2310034G01RikA0A286YDL3 209 aa8.25□□□□□ -1.09
Trim55-201ENSMUST00000029139 Ube2bP63147 152 aa8.24□□□□□ -1.09
Trim55-201ENSMUST00000029139 9230109A22RikQ8BHE6 111 aa8.24□□□□□ -1.09
Trim55-201ENSMUST00000029139 Igkv4-53A0A0G2JFC6 119 aa8.24□□□□□ -1.09
Trim55-201ENSMUST00000029139 P06320 134 aa8.24□□□□□ -1.09
Trim55-201ENSMUST00000029139 Map1bP14873 2464 aaKnown RBP8.24□□□□□ -1.09
Trim55-201ENSMUST00000029139 Vps13aQ5H8C4 3166 aa8.24□□□□□ -1.09
Trim55-201ENSMUST00000029139 Igkv20-101-2A0A0G2JDU3 113 aa8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 Trbv13-2A0A140T8N6 113 aa8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 P06328 117 aa8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 Spink12Q9D256 87 aa8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 FlnbQ80X90 2602 aaKnown RBP8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 Higd1cQ76I25 96 aa8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 A830005F24RikQ8BRT5 167 aa8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 Fam216bQ8CC14 138 aa8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 Nav2E9Q842 2432 aa8.23□□□□□ -1.09
Trim55-201ENSMUST00000029139 Ptprz1B9EKR1 2312 aa8.22□□□□□ -1.09
Trim55-201ENSMUST00000029139 NacaP70670 2187 aaKnown RBP8.22□□□□□ -1.09
Trim55-201ENSMUST00000029139 Ighv1-59A0A0A6YXE0 117 aa8.22□□□□□ -1.09
Trim55-201ENSMUST00000029139 Rpl36aP83882 106 aaKnown RBP8.22□□□□□ -1.09
Trim55-201ENSMUST00000029139 Cd99Q8VCN6 175 aa8.22□□□□□ -1.09
Trim55-201ENSMUST00000029139 Epg5Q80TA9 2572 aa8.22□□□□□ -1.09
Trim55-201ENSMUST00000029139 Gm10322F7D7I4 111 aa8.21□□□□□ -1.09
Trim55-201ENSMUST00000029139 Srsf12Q8C8K3 266 aa8.21□□□□□ -1.09
Trim55-201ENSMUST00000029139 Brca2P97929 3329 aa8.21□□□□□ -1.09
Trim55-201ENSMUST00000029139 KalrnA2CG49 2964 aa8.21□□□□□ -1.09
Trim55-201ENSMUST00000029139 P01747 120 aa8.21□□□□□ -1.1
Trim55-201ENSMUST00000029139 Ndufa12Q7TMF3 145 aaKnown RBP8.21□□□□□ -1.1
Trim55-201ENSMUST00000029139 1700011M02RikB1AX35 88 aa8.2□□□□□ -1.1
Trim55-201ENSMUST00000029139 Gm20499D3Z4G5 72 aa8.2□□□□□ -1.1
Trim55-201ENSMUST00000029139 P01823 113 aa8.2□□□□□ -1.1
Trim55-201ENSMUST00000029139 Ighv10-3A0A075B5T6 119 aa8.2□□□□□ -1.1
Trim55-201ENSMUST00000029139 Igkv4-70A0A0B4J1I5 116 aa8.2□□□□□ -1.1
Trim55-201ENSMUST00000029139 Trav13n-1A0A0G2JEU8 110 aa8.2□□□□□ -1.1
Trim55-201ENSMUST00000029139 3110021N24RikJ3QMN2 152 aa8.19□□□□□ -1.1
Trim55-201ENSMUST00000029139 Sptbn1Q62261 2363 aaKnown RBP8.19□□□□□ -1.1
Trim55-201ENSMUST00000029139 Igkv1-117A0A140T8M0 119 aa8.18□□□□□ -1.1
Trim55-201ENSMUST00000029139 Gm7075D3Z497 112 aa8.18□□□□□ -1.1
Trim55-201ENSMUST00000029139 OdaphJ3QNT8 126 aa8.18□□□□□ -1.1
Trim55-201ENSMUST00000029139 Defb5Q9EPV9 64 aa8.18□□□□□ -1.1
Trim55-201ENSMUST00000029139 Ighv2-5A0A0A6YY69 116 aa8.18□□□□□ -1.1
Trim55-201ENSMUST00000029139 P01745 121 aa8.18□□□□□ -1.1
Trim55-201ENSMUST00000029139 Gm10845Q3UNY9 185 aa8.18□□□□□ -1.1
Trim55-201ENSMUST00000029139 Odf1Q61999 247 aa8.18□□□□□ -1.1
Trim55-201ENSMUST00000029139 Gm37988J3QM41 62 aa8.17□□□□□ -1.1
Trim55-201ENSMUST00000029139 CstadQ9D245 104 aa8.17□□□□□ -1.1
Trim55-201ENSMUST00000029139 Fgfbp3Q1HCM0 245 aa8.17□□□□□ -1.1
Trim55-201ENSMUST00000029139 TprF6ZDS4 2431 aaKnown RBP8.17□□□□□ -1.1
Trim55-201ENSMUST00000029139 Spta1P08032 2415 aa8.17□□□□□ -1.1
Trim55-201ENSMUST00000029139 Akap9Q70FJ1 3797 aa8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Gm36368A0A1D5RLK8 91 aa8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Gm10036E9PYL9 178 aaKnown RBP8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 CenpeQ6RT24 2474 aaKnown RBP8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Ighv1-11A0A0A6YWI9 117 aa8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Ighv10-1A0A0B4J1J6 119 aa8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Ighv1-82A0A0G2JEU7 117 aa8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Atox1O08997 68 aaKnown RBP8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Cnep1r1Q3UJ81 125 aa8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Q8BT88 171 aa8.16□□□□□ -1.1
Trim55-201ENSMUST00000029139 Zfhx3Q61329 3726 aa8.15□□□□□ -1.1
Trim55-201ENSMUST00000029139 Gm16181B0V2H2 73 aa8.15□□□□□ -1.1
Trim55-201ENSMUST00000029139 Gm9903Q8C9Y8 129 aa8.15□□□□□ -1.1
Trim55-201ENSMUST00000029139 Lrrk2Q5S006 2527 aa8.15□□□□□ -1.11
Trim55-201ENSMUST00000029139 Myo18bE9PV66 2605 aa8.15□□□□□ -1.11
Trim55-201ENSMUST00000029139 Odf3l2Q3TZ65 277 aa8.15□□□□□ -1.11
Trim55-201ENSMUST00000029139 Pgpep1lQ9CWB5 130 aa8.15□□□□□ -1.11
Trim55-201ENSMUST00000029139 Dynlrb2Q9DAJ5 96 aa8.15□□□□□ -1.11
Trim55-201ENSMUST00000029139 Ighv2-9-1A0A075B697 116 aa8.14□□□□□ -1.11
Trim55-201ENSMUST00000029139 Phf5aP83870 110 aaKnown RBP8.14□□□□□ -1.11
Trim55-201ENSMUST00000029139 Dmbt1Q60997 2085 aa8.14□□□□□ -1.11
Trim55-201ENSMUST00000029139 Bri3P28662 125 aa8.14□□□□□ -1.11
Trim55-201ENSMUST00000029139 Cfap46E9Q2C0 2641 aa8.13□□□□□ -1.11
Trim55-201ENSMUST00000029139 Flg2Q2VIS4 2362 aa8.13□□□□□ -1.11
Trim55-201ENSMUST00000029139 SetxA2AKX3 2646 aa8.13□□□□□ -1.11
Trim55-201ENSMUST00000029139 Gm884A2A9H6 3643 aa8.13□□□□□ -1.11
Trim55-201ENSMUST00000029139 Cnot1Q6ZQ08 2375 aaKnown RBP8.13□□□□□ -1.11
Trim55-201ENSMUST00000029139 Trav9d-4A0A0G2JG37 103 aa8.13□□□□□ -1.11
Trim55-201ENSMUST00000029139 Gm10647E9Q8X0 124 aa8.13□□□□□ -1.11
Trim55-201ENSMUST00000029139 Ube2aQ9Z255 152 aa8.13□□□□□ -1.11
Trim55-201ENSMUST00000029139 MgaA2AWL7 3003 aaKnown RBP8.12□□□□□ -1.11
Trim55-201ENSMUST00000029139 Prr3Q811B5 190 aaKnown RBP8.12□□□□□ -1.11
Trim55-201ENSMUST00000029139 Igkv4-91A0A075B5L2 119 aa8.12□□□□□ -1.11
Trim55-201ENSMUST00000029139 Gm17689B3GLJ4 109 aa8.12□□□□□ -1.11
Trim55-201ENSMUST00000029139 Defb26Q30KN7 186 aa8.12□□□□□ -1.11
Trim55-201ENSMUST00000029139 Q4KKZ1 196 aa8.12□□□□□ -1.11
Trim55-201ENSMUST00000029139 Rpl39lQ9CQD0 51 aa8.12□□□□□ -1.11
Trim55-201ENSMUST00000029139 SpenQ62504 3644 aaKnown RBP8.11□□□□□ -1.11
Trim55-201ENSMUST00000029139 Celsr1O35161 3034 aa8.11□□□□□ -1.11
Trim55-201ENSMUST00000029139 Gm10645Q3UPY1 145 aa8.11□□□□□ -1.11
Trim55-201ENSMUST00000029139 Igkv8-27A0A0G2JF28 120 aa8.11□□□□□ -1.11
Trim55-201ENSMUST00000029139 Igkv8-30A0A140T8M3 121 aa8.11□□□□□ -1.11
Trim55-201ENSMUST00000029139 Edn3P48299 214 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms