RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Odf3l1Q810P2 275 aa12.15□□□□□ -0.46
Pcdh1-203ENSMUST00000160721 Ighv8-12A0A0G2JDE1 119 aa12.15□□□□□ -0.46
Pcdh1-203ENSMUST00000160721 Triap1Q9D8Z2 76 aa12.15□□□□□ -0.46
Pcdh1-203ENSMUST00000160721 Snai3Q9QY31 287 aa12.15□□□□□ -0.46
Pcdh1-203ENSMUST00000160721 Atp5g3P56384 141 aa12.15□□□□□ -0.46
Pcdh1-203ENSMUST00000160721 Acyp1P56376 99 aa12.15□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Camk2n2Q78WH7 79 aa12.15□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 9430069I07RikQ9CX21 111 aa12.15□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Fam222aQ6PGH4 453 aa12.14□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 P84751 237 aa12.14□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Gm9958Q8C9U4 106 aa12.14□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Cox7b2Q9D2H1 82 aa12.13□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Ormdl1Q921I0 153 aa12.13□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Obox8V9GWY9 217 aa12.13□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 P01745 121 aa12.13□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Gm5468Q8C3D3 155 aa12.13□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Q9DAQ5 155 aa12.13□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Igkv8-18A0A0B4J1J3 123 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 P06328 117 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 AW146154Q3TPQ7 468 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Ndufa4l2Q4FZG9 87 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Esm1Q9QYY7 184 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Tmem254aP0DN89 123 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Tmem254bP0DN90 123 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Tmem254cP0DN91 123 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Vpreb2P13373 142 aa12.12□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Ebi3O35228 228 aa12.11□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Pcnx2Q5DU28 2122 aa12.11□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Gm17577J3QNF7 156 aa12.11□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 P01747 120 aa12.11□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Rpl39lQ9CQD0 51 aa12.11□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Ep400Q8CHI8 3072 aaKnown RBP12.1□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Ighv2-6A0A075B6A7 116 aa12.1□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Sh2d1aO88890 126 aa12.09□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Flg2Q2VIS4 2362 aa12.09□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Ighv1-11A0A0A6YWI9 117 aa12.09□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Rpl18aP62717 176 aaKnown RBP12.09□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Igkv3-5A0A140T8M6 119 aa12.08□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Sprr3O09116 238 aa12.08□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Tmem223Q9CQE2 199 aaKnown RBP12.08□□□□□ -0.47
Pcdh1-203ENSMUST00000160721 Gm37389A0A0A6YW05 95 aa12.08□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 P01820 115 aa12.08□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Znf575Q3TXZ1 239 aa12.08□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 4930470P17RikQ9D542 155 aa12.08□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Trav9n-4A0A075B631 113 aa12.07□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Dscaml1Q4VA61 2053 aa12.07□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Edn2P22389 175 aa12.07□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 P18527 97 aa12.07□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Reg3bP35230 175 aa12.07□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 B9d2Q3UK10 175 aa12.07□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Naa38Q9D2U5 125 aa12.07□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Gm14137Q8CE97 175 aa12.06□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Cfc1P97766 202 aa12.05□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 9530003J23RikQ8BM26 151 aa12.05□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Higd2aQ9CQJ1 106 aa12.05□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Vpreb3D3Z6J4 130 aa12.05□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Fxyd5P97808 178 aa12.05□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Gm28539A0A087WSL9 92 aa12.04□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 P01659 112 aa12.04□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Zfp462B1AWL2 2495 aaKnown RBP12.04□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Tmem213Q08EA8 116 aa12.04□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Ypel4Q65Z93 127 aa12.04□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Ube2aQ9Z255 152 aa12.04□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 SptssbQ925E8 76 aa12.04□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 1700012A03RikQ9DAF1 130 aa12.04□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Igkv3-10A0A0G2JGN0 119 aa12.03□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Q9CX25 107 aa12.03□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Hivep2Q3UHF7 2430 aa12.03□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 FshbQ60687 130 aa12.03□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Nav2E9Q842 2432 aa12.03□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Usp9xP70398 2559 aaKnown RBP12.02□□□□□ -0.48
Pcdh1-203ENSMUST00000160721 Gm1968Q3T9I3 115 aa12.02□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Gm5878E9PUB3 99 aa12.02□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 PcntP48725 2898 aa12.02□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Gm10735Q3US96 136 aa12.01□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Rbx1P62878 108 aa12.01□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Gm12353A2AGJ4 60 aa12.01□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Bahcc1Q3UHR0 2643 aa12□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 FcorP0DJI6 106 aa12□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Gm5629P06327 117 aa12□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Eml6Q5SQM0 1958 aa11.99□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Tfpi2O35536 230 aa11.99□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Prr15lQ8JZM2 100 aa11.99□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Prrc2aQ7TSC1 2158 aaKnown RBP11.99□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Ighv8-5A0A0A6YY60 119 aa11.99□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 BtcQ05928 177 aa11.99□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Pla2g2dQ9WVF6 144 aa11.99□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Ighv1-75A0A075B5Y2 117 aa11.98□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Pde6gP09174 87 aa11.98□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Gm17521F6QAC8 156 aa11.98□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Ly6c2P0CW03 131 aa11.98□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 CtrlQ9ER05 264 aa11.98□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 EnhoQ8K1D8 76 aa11.98□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Ly6hQ9WUC3 139 aa11.98□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 DysfQ9ESD7 2090 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Ighv1-85A0A075B5Y6 117 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Igkv4-92A0A0B4J1I2 117 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Odf3Q920N1 254 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 2010109I03RikQ9CQ11 111 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Gphb5Q812B2 130 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms